prot_F-distichus_contig101972.161.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig101972.161.1
Unique Nameprot_F-distichus_contig101972.161.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length114
Homology
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A5S6QG42_TRIMR (Uncharacterized protein n=5 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QG42_TRIMR)

HSP 1 Score: 63.5 bits (153), Expect = 2.300e-9
Identity = 36/110 (32.73%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    6 WESDSGATFHMSHTRAGMSAYKKALPG-TNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVEQWGKPLIYYRNEAVLGFPGEESLVFK 114
            W  DSGAT HMS      + +K   P  T V+IADG++LP+   G +   L + + T K     +  +VPG+   +LS+ + VE  G+ +++ RN   + F  ++ LV +
Sbjct:  283 WVIDSGATHHMSPNEEYFTKWKAKSPANTQVQIADGSVLPIANAGTVRAKLTRNKGTVKEFSAKNTLFVPGIRTGILSVPQMVEN-GQTVVFSRNGCRI-FGADDQLVIE 390          
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: UPI0017832608 (uncharacterized protein LOC118757367 n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI0017832608)

HSP 1 Score: 55.1 bits (131), Expect = 6.240e-7
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    6 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLS 82
            W  DS AT HM+  R   S  +K   G+ V++A+ + L ++  G I +D+    +  K V++++V YVP LS+NLLS
Sbjct:   16 WYVDSAATKHMTFHREWFSTLRKYTTGSKVKVANNSYLQIEAIGTILIDVKVDNQW-KPVRLENVLYVPELSENLLS 91          
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: UPI0017828D95 (uncharacterized protein LOC118735278 n=2 Tax=Rhagoletis TaxID=28609 RepID=UPI0017828D95)

HSP 1 Score: 55.1 bits (131), Expect = 1.820e-6
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    6 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLS 82
            W  DS AT HM+  R   S  +K   G+ V++A+ + L ++  G I +D+    +  K V++++V YVP LS+NLLS
Sbjct:  257 WYVDSAATKHMTFHREWFSTLRKYTTGSKVKVANNSYLQIEAIGTILIDVKVDNQW-KPVRLENVLYVPELSENLLS 332          
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A0P1ACE6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACE6_PLAHL)

HSP 1 Score: 53.9 bits (128), Expect = 4.760e-6
Identity = 29/85 (34.12%), Postives = 48/85 (56.47%), Query Frame = 0
Query:    6 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADG--NILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVE 88
            W  DSG T H++H     S +   +  +N  I  G  N +P++G G+IE+++   + T +M+ + DV Y P L  +LLS+  AV+
Sbjct:  229 WTIDSGCTRHVTHE----SQWFSTISASNGSITVGVKNQIPIEGIGKIELEVTDSKGTQRMLTLHDVLYAPELKFSLLSVPAAVK 309          
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A7D9IJR2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IJR2_PARCT)

HSP 1 Score: 52.4 bits (124), Expect = 1.640e-5
Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 0
Query:    2 RKEEWESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPR-RTTKMVKMDDVAYVPGLSQNLLSIVKAVEQWGKPLIYYRNEAV 102
            R   W  DSGAT HM +  +            +V +ADG+++   G G ++  ++ P  +  K   + DV YVP LS NL+S+ KA +  GK   Y +++ +
Sbjct:   51 RTNTWIIDSGATCHMCNDASQFVKLHNLEKPEDVTLADGHVVKATGRGVVKTKIESPNGQKGKSCVLQDVLYVPSLSNNLVSVSKATKS-GKTEDYDKSKDI 151          
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A225UU99_9STRA (Pol Polyprotein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UU99_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 6.050e-5
Identity = 25/83 (30.12%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    6 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVE 88
            W  DSG T H+SH     +    +  G ++ +   N +P++G GR+E+++   + T + + +  V Y P L  +LLS+  AV+
Sbjct:  205 WTIDSGCTRHVSHESQWFTDITTS--GGSITVGGNNQIPIEGIGRVELEVSDSKGTMQKLILHGVLYAPQLQFSLLSVPAAVK 285          
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Match: A0A2P4XU07_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU07_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.920e-5
Identity = 25/83 (30.12%), Postives = 44/83 (53.01%), Query Frame = 0
Query:    6 WESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGRIEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVE 88
            W  D G T H++H     S    A  G ++ +   N +P++G GR+E+++   + T + + +  V Y P L  +LLS+  AV+
Sbjct:  153 WTIDPGCTRHVTHESQWFSDI--AASGGSITVGGNNQIPIEGIGRVELEVSDSKGTMQNLILHGVLYAPQLQFSLLSVPAAVK 233          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig101972.161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A5S6QG42_TRIMR2.300e-932.73Uncharacterized protein n=5 Tax=Trichuris muris Ta... [more]
UPI00178326086.240e-737.66uncharacterized protein LOC118757367 n=1 Tax=Rhago... [more]
UPI0017828D951.820e-637.66uncharacterized protein LOC118735278 n=2 Tax=Rhago... [more]
A0A0P1ACE6_PLAHL4.760e-634.12Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A7D9IJR2_PARCT1.640e-531.37Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A225UU99_9STRA6.050e-530.12Pol Polyprotein (Fragment) n=1 Tax=Phytophthora me... [more]
A0A2P4XU07_9STRA9.920e-530.12Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig101972contigF-distichus_contig101972:1708..2049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig101972.161.1mRNA_F-distichus_contig101972.161.1Fucus distichus monoicousmRNAF-distichus_contig101972 1708..2049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig101972.161.1 ID=prot_F-distichus_contig101972.161.1|Name=mRNA_F-distichus_contig101972.161.1|organism=Fucus distichus monoicous|type=polypeptide|length=114bp
DRKEEWESDSGATFHMSHTRAGMSAYKKALPGTNVEIADGNILPVDGFGR
IEVDLDQPRRTTKMVKMDDVAYVPGLSQNLLSIVKAVEQWGKPLIYYRNE
AVLGFPGEESLVFK
back to top