mRNA_F-distichus_contig1013.102.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 178 bits (452), Expect = 1.090e-48 Identity = 115/369 (31.17%), Postives = 188/369 (50.95%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGY-------TGCVESANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+LNK++YGL QA R W L + +GF Q D CVFR + EG + +VVHVDDI + +++ +F +L ++++GD +Y G G ++ + G +E+ +P G + D DEE R +TR ++ P H +A + L Y++ + GIT+ G GL +E + D+++ + RRSVSG ++M G ISW R Q+ T+E +YV+ ++V+KE+LFLRQV FM P + + VF+DN+G I+LA N I++ +KHID +HH +R+ +++ + V S Q+AD L K L F+ H +++++
Sbjct: 70 KLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.290e-48 Identity = 122/375 (32.53%), Postives = 184/375 (49.07%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRT-----------AEPGGEGRNEEVSVPGGSGGAYVDGDEE---------------------TSGHCVRRTRC-SKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+L K++YGL QA R W L + +GFEQ D CVFR + +G +++VVHVDDI A ++ +F A+L + ++++G+ +Y +GC N G T AE G G SVP SG D D + T R ++ P H A + L Y GI++ G G ++ Y D++F + RRSVSG ++ GA+SW R Q+ T+E +YVA +VVKE+LFLRQ+ FM P + + + VF+DN+G I+LA N I++ +KHID +HH +R+ + +++ V V S Q AD L K L F+ H F++N+
Sbjct: 94 KLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCFYERNKETGRLTISQQTFTDELAAEYGVVGGR---SVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE) HSP 1 Score: 176 bits (446), Expect = 4.770e-48 Identity = 120/370 (32.43%), Postives = 189/370 (51.08%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANAL-KGGRTA--EPGGEGRNEEVSVPGGSGGAYVDGD-------EETSGHCVRRT-------------------RCSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYGGQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
++ +A+YGL Q+GR W + D + + G+EQ + DPC+FRKVV+GE ++V++VDDI+ A ++ A L ++F ++D+GD +Y G V+ N K +TA E N + P A VD D E + VR T + K+ P A+V+ + YL K+ GITY +G GL ++ + DS++ RRS +G + + + + Q VTA T+E +Y+A E VKE LF+R V F+ P + + V +DNEG + L N +S R+KHID + H +R+ A K+ V +E+Q+AD+L K LG K + H K ++N+
Sbjct: 47 KVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEERE-ELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAP---TPAVVDDDLGPKRDDESSVDKPVRETIGCLMWLLFMRPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYV-RGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVLEDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNL 411
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 178 bits (452), Expect = 2.310e-47 Identity = 115/369 (31.17%), Postives = 188/369 (50.95%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGY-------TGCVESANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+LNK++YGL QA R W L + +GF Q D CVFR + EG + +VVHVDDI + +++ +F +L ++++GD +Y G G ++ + G +E+ +P G + D DEE R +TR ++ P H +A + L Y++ + GIT+ G GL +E + D+++ + RRSVSG ++M G ISW R Q+ T+E +YV+ ++V+KE+LFLRQV FM P + + VF+DN+G I+LA N I++ +KHID +HH +R+ +++ + V S Q+AD L K L F+ H +++++
Sbjct: 244 KLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.390e-46 Identity = 123/375 (32.80%), Postives = 187/375 (49.87%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRT-----------AEPGGEGRNEEVSVPGGSGGAY--VDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+L K++YGL QA R W L + +GFEQ D CVFR + +G +++VVHVDDI A ++ +F A+L + ++++G+ +Y +GC N G T AE G G SVP SG D DE + R +TR ++ P H A + L Y GI++ G G ++ Y D++F + RRSVSG ++ GA+SW R Q+ T+E +YVA +VVKE+LFLRQ+ FM P + + + +F+DN+G I+LA N I++ +KHID +HH +R+ + +++ V V S Q AD L K L F+ H F++N+
Sbjct: 924 KLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCFYERNKETGRLTISQQTFTDELAAEYGVVGGR---SVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 179 bits (453), Expect = 2.740e-46 Identity = 122/375 (32.53%), Postives = 184/375 (49.07%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRT-----------AEPGGEGRNEEVSVPGGSGGAYVDGDEE---------------------TSGHCVRRTRC-SKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+L K++YGL QA R W L + +GFEQ D CVFR + +G +++VVHVDDI A ++ +F A+L + ++++G+ +Y +GC N G T AE G G SVP SG D D + T R ++ P H A + L Y GI++ G G ++ Y D++F + RRSVSG ++ GA+SW R Q+ T+E +YVA +VVKE+LFLRQ+ FM P + + + VF+DN+G I+LA N I++ +KHID +HH +R+ + +++ V V S Q AD L K L F+ H F++N+
Sbjct: 1430 KLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCFYERNKETGRLTISQQTFTDELAAEYGVVGGR---SVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 178 bits (451), Expect = 4.930e-46 Identity = 117/351 (33.33%), Postives = 180/351 (51.28%), Query Frame = 1
Query: 10 LNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANALKGGRTA--EPGGEGRNEEVSVPGG-----SGGAYV---DGDEETSGHCVRRTRCSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
L K++YGL Q+ R W L + +GFEQ D CVFR + G +++VVHVDDI A ++ +F A+L + ++++G+ +Y +GC+ + G T + + E VPGG S G + D DEE + R H + L Y G+++ G G ++ Y D++F + RRSVSG ++ G +SW R Q+ T+E +YVA +VVKE+LFLRQV FM P + + + VF+DN+G I+LA N I++ +KHID +HH +R+ + ++V V V S Q AD L K L F+ H F++N+
Sbjct: 1236 LGKSLYGLRQSPRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWY---SGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFREL-----------VHWDEAMAILGYAKRTSYMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEVSVIHVPSPYQRADFLTKSLPKDAFESHLDFVMNL 1571
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.130e-45 Identity = 114/369 (30.89%), Postives = 188/369 (50.95%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGY-------TGCVESANALKGGRTAEPGGEGRNEEVSVPGGSGGAYVDGDEETSGHCVR-----------RTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+LNK++YGL QA R W L + +GF Q D CVFR + EG + +VVHVDDI + +++ +F +L ++++GD +Y G G ++ + G +E+ +P G + D DEE R +TR ++ P H +A + L Y++ + GIT+ G GL +E + D+++ + RRSVSG ++M G ISW R Q+ T+E +YV+ ++V+KE+LFLRQV FM P + + VF+DN+G I+LA N I++ +KHID +HH +R+ +++ + V S Q+A+ L K L F+ H +++++
Sbjct: 765 KLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSM 1132
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 167 bits (423), Expect = 4.880e-45 Identity = 117/373 (31.37%), Postives = 186/373 (49.87%), Query Frame = 1
Query: 7 RLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMG--YTGCVE------SANALKGGRTAEPGGE-GRNEEVSVPGGSGGAYVDGDEETSGHCV-------------RRTR---------CSKVLRKPGPAHKKAVVKTLQYLLHMKEGGITYG-GQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
+L K++YGL QA R W L + +GF Q D CVFR + EG M++VVHVDDI A + + +F +L + ++++G+ +Y Y VE S AE G E GR SVP D DE + V +TR ++ P H KA + L Y+ GIT+ G G+ ++ + D+++ + RRSVSG ++M G ++W R Q+ T+E +YVA ++V+KE+LFLRQV FM P + + VF+DN+G I++ N I + +KHID +HH +R+ + +++ + V ++ Q+AD L K + + F H F++N+
Sbjct: 8 KLCKSLYGLKQASRHWHAHLTRCLLLLGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERC-DKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGR----SVPLPVSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNL 375
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.250e-44 Identity = 113/369 (30.62%), Postives = 189/369 (51.22%), Query Frame = 1
Query: 1 VGRLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEMVVVVHVDDILAHAKDQATMGRFAAELGQKFKLEDMGDAGYYMGYTGCVESANAL-KGGRTAEPGGEGRNEEVSVPGGSGGAY-------------VDGDEETSGHCVRRTRCS------------KVLRKPGPAHKKAVVKTLQYLLHMKEGGITYGGQGCGLCIEAYTDSNFGTCLDTRRSVSGAVLMLVKGAISWDLRVQEVTASGTSEVKYVAFSEVVKELLFLRQVQEFMEPSMRISAVDVFKDNEGTIKLATNKIASRRTKHIDAKHHLVRDASDARKVRVADVRSEDQYADLLAKPLGMQKFQKHAKFILNI 1029
V ++ +A+Y L Q+GR W + D + G+EQ + DPCVFRKVV+GE ++V++VDDIL A D+ A L +KF ++D+G+ +Y G ++ N + K +TA + +V+ + A VD + C+ T+ + K+ + P A+V+ + YL K+ GITY +G GL + + D+++ RRS +G + + + + Q VTA TSE +Y+A E VKE LF+R V F+ P + + V +DN+G + + N +S R+KHID + H +R+ + K+ V + +Q+AD+L K LG +K + H K ++N+
Sbjct: 5 VVKVERALYRLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREELFASLNKKFPVKDLGECTWYDGCAIVMDVENGITKLSQTAYVESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTKLTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTKDFGITYV-RGSGLDLSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKSEYHRKALMNL 371 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1013.102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig1013.102.1 >prot_F-distichus_contig1013.102.1 ID=prot_F-distichus_contig1013.102.1|Name=mRNA_F-distichus_contig1013.102.1|organism=Fucus distichus monoicous|type=polypeptide|length=345bp VGRLNKAIYGLVQAGRCWEHKLCDDMTTIGFEQAKTDPCVFRKVVEGEAEback to top mRNA from alignment at F-distichus_contig1013:5114..6247+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig1013.102.1 ID=mRNA_F-distichus_contig1013.102.1|Name=mRNA_F-distichus_contig1013.102.1|organism=Fucus distichus monoicous|type=mRNA|length=1134bp|location=Sequence derived from alignment at F-distichus_contig1013:5114..6247+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig1013:5114..6247+ >mRNA_F-distichus_contig1013.102.1 ID=mRNA_F-distichus_contig1013.102.1|Name=mRNA_F-distichus_contig1013.102.1|organism=Fucus distichus monoicous|type=CDS|length=2070bp|location=Sequence derived from alignment at F-distichus_contig1013:5114..6247+ (Fucus distichus monoicous)back to top |