Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft748_10 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SignalP-noTM |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 76 |
| Hectar predicted targeting category | signal peptide |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft748_10a-0001 ID=EsuBft748_10a-0001|Name=EsuBft748_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=769bp|location=Sequence derived from alignment at Scaffold_230:462813..463634+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTTGCGTTCATCGCAGCCTTCCTGCTACGAGCTATTGACAGCGTGGT
TTCCTGCTCCATCATTGCCGCGGTATTGGACAAGTGCACTTTCCCTTCGA
TCGAACAACTCGGGCGGCGGTAGCCACTGACCGTTCTTGTAGGATAGCAG
GTTTAGGAACCTGTCGTAAGAGAGTGATGCAAACTTTACTGCTGTTGAAG
GACGGCACACACTTGATAGAATGGCGGACCACAAGAAATTTTCCGTCTTG
CTATAATTGGGAGGGTTGTTCGCCAAGGAGTTTGTTCGACGGAGCTGCCG
AGTACAGTGGTGAGAGCAGCTCAGTTTTGCTCCGTGACATATGTTTCCAT
ATCCACTAGTCGCTCGGTGTGATAAGTATTTACTGCACACATGCATACAA
CACACGCGTGTCTCGTTCTCATCCAGAAACACTAGTCTCATGTGTGGCCT
GCCTGCTATTATGTGATCCCGGTTGGGGCGTCCAACGGCGTTCTGAGTGG
TGAAAAATAGACGTCTGGAGTACACAAGATGACAACACACACAACCTGTG
CACGGAGTAGAACCGCTCCGCGGGGCGTTTTTTTCTTAACCCTTTTGGGT
CTACAGGCGTCCTGAATGATCATTGATTGATCACTTGCAAATGATGGTGT
TGTGGCATGCCATGGAGTTGTTGCCCTGTATCCCTCCACGCCAGGTGTTG
GGAAGTCAATAGGTAGGTGTGTCTTTATTATTCGCATCGACCGCGCTACC
CGGTGACCAATACAATGAC back to topprotein sequence of EsuBft748_10a-0001 >EsuBft748_10 ID=EsuBft748_10|Name=EsuBft748_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=40bp
MVAFIAAFLLRAIDSVVSCSIIAAVLDKCTFPSIEQLGRR back to topmRNA from alignment at Scaffold_230:462813..463634+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft748_10a-0001 ID=EsuBft748_10a-0001|Name=EsuBft748_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=822bp|location=Sequence derived from alignment at Scaffold_230:462813..463634+ (Ectocarpus subulatus male Bft15b)
ATGGTTGCGTTCATCGCAGCCTTCCTGCTACGAGCTATTGACAGCGTGGT
TTCCTGCTCCATCATTGCCGCGGTATTGGACAAGTGTAAGTTCTGCCTCC
CGGGACCAAACGACCGGTGAGTGCAACTACAGTTGCAGGCACTTTCCCTT
CGATCGAACAACTCGGGCGGCGGTAGCCACTGACCGTTCTTGTAGGATAG
CAGGTTTAGGAACCTGTCGTAAGAGAGTGATGCAAACTTTACTGCTGTTG
AAGGACGGCACACACTTGATAGAATGGCGGACCACAAGAAATTTTCCGTC
TTGCTATAATTGGGAGGGTTGTTCGCCAAGGAGTTTGTTCGACGGAGCTG
CCGAGTACAGTGGTGAGAGCAGCTCAGTTTTGCTCCGTGACATATGTTTC
CATATCCACTAGTCGCTCGGTGTGATAAGTATTTACTGCACACATGCATA
CAACACACGCGTGTCTCGTTCTCATCCAGAAACACTAGTCTCATGTGTGG
CCTGCCTGCTATTATGTGATCCCGGTTGGGGCGTCCAACGGCGTTCTGAG
TGGTGAAAAATAGACGTCTGGAGTACACAAGATGACAACACACACAACCT
GTGCACGGAGTAGAACCGCTCCGCGGGGCGTTTTTTTCTTAACCCTTTTG
GGTCTACAGGCGTCCTGAATGATCATTGATTGATCACTTGCAAATGATGG
TGTTGTGGCATGCCATGGAGTTGTTGCCCTGTATCCCTCCACGCCAGGTG
TTGGGAAGTCAATAGGTAGGTGTGTCTTTATTATTCGCATCGACCGCGCT
ACCCGGTGACCAATACAATGAC back to topCoding sequence (CDS) from alignment at Scaffold_230:462813..463634+ >EsuBft748_10a-0001 ID=EsuBft748_10a-0001|Name=EsuBft748_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=123bp|location=Sequence derived from alignment at Scaffold_230:462813..463634+ (Ectocarpus subulatus male Bft15b)
ATGGTTGCGTTCATCGCAGCCTTCCTGCTACGAGCTATTGACAGCGTGGT
TTCCTGCTCCATCATTGCCGCGGTATTGGACAAGTGCACTTTCCCTTCGA
TCGAACAACTCGGGCGGCGGTAG back to top
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