Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FT55 |
| ProteomeId | EsuBft811_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 133 |
| Hectar predicted targeting category | other localisation |
| Evalue | 5.16e-207 |
| EggNOG OGs | 2E0FN@1|root,2S7W7@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft811_6a-0001 ID=EsuBft811_6a-0001|Name=EsuBft811_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1332bp|location=Sequence derived from alignment at Scaffold_230:310775..314020- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGCGATCACGATGGGCAGCGGAACGGATGACGGGGGCGAGGAGGAA
GGGGCCGATGGAAAACCCTGATGACGGGGCGTCCTGCTCCACCTACGAGG
AGCATGTGGAAGTCGCGAAACTTCTTGATAGCACTTGTGAATGGGACCCC
TACATGTGCTGCTGGACCGGCAACGACGGAGCGGACGGGATGACGGCGAA
CTCCGACGTCTGCCGCGTACTGGACTACCCGGAAGAGGGAGACTCCTTCG
AAATGCCCCGGGAATCAGAGGGCTTCGTGTGCTGCCACGGCTTCGCCTGG
GCGGAAGGCGCGGACGTGGACACCCACATCCTGCCCCTGTACCACTACGT
GAAGAACGTCGGCCGTACCGAAGAGGCGGGCTTCTACGAGATGAAGCTGC
CGGATAGCGTGGAGGGAACGCCGGAATGCGGGTGCATCGAGGAAATACCT
TCGGTGTCCTGCTCCGAGTGCTCCAGGTACTCCTGGGAGGGGATCGCTGG
TTGCGGCAACAACGGGCTGTTAAGCCAGTACCGCGGTTGCCTGGGCGAGC
CCTGCGGCCCTATGGACGACAATCTGGTGAGGACATGCGACAACGAAGAC
ATTCCCGACTACGACCACGGGTCGTGCAGTCACAACACGTACATGTGCTG
CTTGACGGAGAACGACGGCCAGGGAATGGCAGAAAACACGGTGAGACGTC
GCGTGCCGGCCGTGGCCTCTTGCGTGGAATTTTCTTGCTACAGTGCTGAC
AGGAAGGATGTTGGGCTGACTATGTTGTCTGTTATCTTGGGTCATCTTGG
TGCCACGAAGGACGTGTGCCGTGTGTTGGACTACCCGTCGGTGGGTGGGG
CGTTGGAGTTTGCCGGCGACAGCGAGAGAGAGGCGCACCGCCACGGGTTC
GTATGGACCGAGGACGCCACCGACAAGTACATCCACCTCCTGTCGCAGTT
CGTCCAGAAGTTCGACCACAGGGACAGGAGGGGGTACTACGGAAAGTACA
TTACTGTAGGAAAAGCAGCGCACAACGTCATCATGGTGAATGGGAGAACG
ACTGGTCCAGGCGAGGACAACACGAATAACCCACTGTCTCCTCCTCCAAA
CGTTTCGCATGTCATTCTTGTCGTAACCAGTATCGAGGGCGCCCCCATGT
ACGGCTGCGTCGAAGAGATGCCGGTGGTTTCCGAGGCTGACGGCACCACC
TACGATACCGACCCGGAGCGAGAGGGCAAGTTCACGGCGTGCACGACGAA
CGACCTCTGCACCCGCTACGCGGAAGACTACCCCACGGGGGAGCTTGCCA
ACCTCGTCGGCACCTACGACAACGCGGAGTAA back to topprotein sequence of EsuBft811_6a-0001 >EsuBft811_6 ID=EsuBft811_6|Name=EsuBft811_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=443bp
MRRSRWAAERMTGARRKGPMENPDDGASCSTYEEHVEVAKLLDSTCEWDP
YMCCWTGNDGADGMTANSDVCRVLDYPEEGDSFEMPRESEGFVCCHGFAW
AEGADVDTHILPLYHYVKNVGRTEEAGFYEMKLPDSVEGTPECGCIEEIP
SVSCSECSRYSWEGIAGCGNNGLLSQYRGCLGEPCGPMDDNLVRTCDNED
IPDYDHGSCSHNTYMCCLTENDGQGMAENTVRRRVPAVASCVEFSCYSAD
RKDVGLTMLSVILGHLGATKDVCRVLDYPSVGGALEFAGDSEREAHRHGF
VWTEDATDKYIHLLSQFVQKFDHRDRRGYYGKYITVGKAAHNVIMVNGRT
TGPGEDNTNNPLSPPPNVSHVILVVTSIEGAPMYGCVEEMPVVSEADGTT
YDTDPEREGKFTACTTNDLCTRYAEDYPTGELANLVGTYDNAE back to topmRNA from alignment at Scaffold_230:310775..314020- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft811_6a-0001 ID=EsuBft811_6a-0001|Name=EsuBft811_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3246bp|location=Sequence derived from alignment at Scaffold_230:310775..314020- (Ectocarpus subulatus male Bft15b)
ATGAGGCGATCACGATGGGCAGCGGAACGGATGACGGGGGCGAGGAGGAA
GGGGCCGATGGAAAACCCTGATGACGGGGCGTCCTGCTCCACCTACGAGG
AGCATGTGAGAACATGAAATTAACAGAAAACCGGCGCGTACAGTACGAAT
TTAAGAAGAAGAACCGAACCATTTTGCTAGTAGGGCGAAACAAGAAACAG
AAACGGCTTGAGCATACTTTGCTGGGTTACTACAGGCTCGGGTGGTGAGC
AGTATCAACCATAGAGAAGGCTATTGCATGTGTGTTTGTGTGTGTGTTTT
GAGCCTTTTTTTCATTGCATCGACCGCGCTACCCAGCTGTGTTCGTTGTT
GCCCATAATGCAATCCCACGAACACGTTTCAGGTGGAAGTCGCGAAACTT
CTTGATAGCACTTGTGAATGGGACCCCTACATGTGCTGCTGGACCGGCAA
CGACGGAGCGGACGGGATGACGGCGAACTCCGACGTCTGCCGCGTACTGG
ACTACCCGGAAGAGGGAGACTCCTTCGAAATGCCCCGGGAATCAGAGGGC
TTCGTGTGCTGGTGGGTCCATATGCCTGTCTTTCTTTGTAGAGATCTGAG
TGTTTCAAGTAGTCTACTGCATTTTGTTTATCCTTTTTTGAGCAAAAGAT
CTACGCCATGCATGGGATCCCGCATCGTAATACAGCGGGGGGGCGTCATG
AACGCCGGTTGATTAGCGCCGGTGGCCTTGTATTGCGTCGGTGAAATTGC
TGGGCACAGACCGACAATCATTGTGTACATTGAATAGCGCCGGTCCCTCT
GAATAGCGCCGGTCGATTCGCCGGGCACAAACCGCCGTATTGAGGGCCCT
CCACTGTAGTCCGTATTTCGTTTTGGTTTTGGTTAATTTTCTTTCTTCTG
TTTGGGGAAGCGATCACTTCCCCTGGATATGGATTTATCCTCTACAGCTC
CTGCTGGGGTGCTAAAACGGTAACGCGATATCTTGTTTGCTTTAACAAAG
CTGTTCGTGTGCCCACCCCGCCTTGCTTCTGTTTTGATGCCAACCAACGT
CAGCCACGGCTTCGCCTGGGCGGAAGGCGCGGACGTGGACACCCACATCC
TGCCCCTGTACCACTACGTGAAGAACGTCGGCCGTACCGAAGAGGCGGGC
TTCTACGGTGAGTCGACATCTGTTGGTGGTTTTTGCTCTTGAGCTAAATA
CGCGACGAGCAATTCTGACTTGCGGTTGCTCGGGCGCGGTTACCGTAGAT
TCCTACTTCGTACCTGACGAAGATCACCGGAGCATTGGTTTTTGGAATGA
CTTGCAGTACTACAGTTGTAGCAGGAGGCCTTGGCTAGAGGTATCGGAAG
GGGCAATCTCTGGTAGACCTTCCTCTACGTAGGGCTCCGTCTTCTTCGCG
TACGGCCCGTAGTACCGTTGTTGGACACTGCTGCGTTGAATGTGTACGCA
GAGATGAAGCTGCCGGATAGGTCCGTGCCCTGTCACATCACTAGCAGCGC
CGTTTGTTCCATTCGGGCCATGTCAGGGGAACGACGGCTACATCTTCTGT
CTTCGTCGTGGTGCCGATTGTCCACCGCATCACCCTCCGGCAGTTTTTGG
TTCCCTTCGTGTTTACCCTTTTGCTCCGGGGAAATGTGCACGGTAGGCCC
ACCACGGCCGTTTGGCGAACCTCTCGTGCTGAAATCTTGATCCTCTCCTT
GCACGTTTGTCGTTGATTGAATTCTCGTGTGCAATCCGACAGCGTGGAGG
GAACGCCGGAATGCGGGTGCATCGAGGAAATACCTTCGGTGTCCTGCTCC
GAGTGCTCCAGGTACGAACGTCAACGTTTTGGTTTGCTGAAAACCTACCT
AGTGGGGAGCCATGGTTAAGGGCTTTGCCAAAGGACAACGTAACGACATT
TAGTAGTCGAGAGTGGGATTACCAGCCATGCCGGCGTTTGTAGGTAGAAC
ATTACCTGAAACGTATGAATCTTTGATGTGACCCTCGACATGACCCCTTT
CCTTCTTGTCACGTGACCAGGTACTCCTGGGAGGGGATCGCTGGTTGCGG
CAACAACGGGCTGTTAAGCCAGTACCGCGGTTGCCTGGGCGAGCCCTGCG
GCCCTATGGACGACAATCTGGTGAGGACATGCGACAACGAAGACATTCCC
GACTACGACCACGGGTCGTGCAGTCACAACACGTACATGTGCTGCTTGAC
GGAGAACGACGGCCAGGGAATGGCAGAAAACACGGTGAGACGTCGCGTGC
CGGCCGTGGCCTCTTGCGTGGAATTTTCTTGCTACAGTGCTGACAGGTGT
TGTTTATCTCGAGCGTGATGACTCTTTGGCCCCCTTTCCAAACGTGTGAA
CCCTCGCGCAGTACCATCTCTGGACAATCCCGTCTATCGACAAGACACGT
ATGCTAGGAAGGATGTTGGGCTGACTATGTTGTCTGTTATCTTGGGTCAT
CTTGGTGCCACGAAGGACGTGTGCCGTGTGTTGGACTACCCGTCGGTGGG
TGGGGCGTTGGAGTTTGCCGGCGACAGCGAGAGAGAGGCGCACCGCCACG
GGTTCGTATGGACCGAGGACGCCACCGACAAGTACATCCACCTCCTGTCG
CAGTTCGTCCAGAAGTTCGACCACAGGGACAGGAGGGGGTACTACGGAAA
GTGAGTCGCCTCGTACGTTTACCTCTGCATGCCCACATCGGTATCCCGTC
CTCGTCAGCCTGTCGCCGAATTGAACAACATTTGTTTCGTAAGACGCGTG
CTTGTGTGGACGGTCGCCCGAGTTTTCGCGGTGGTGACGTGCACCATTCT
ATTTTCTACTGAATGCCGACCATGGTACCACGTCTCATACACGACACACC
TCTCTCCATCTCACCCCTACCGAAACAAAAACACGTACCACACTATGTAG
GGCAAACAGGTACATTACTGTAGGAAAAGCAGCGCACAACGTCATCATGG
TGAATGGGAGAACGACTGGTCCAGGCGAGGACAACACGAATAACCCACTG
TCTCCTCCTCCAAACGTTTCGCATGTCATTCTTGTCGTAACCAGTATCGA
GGGCGCCCCCATGTACGGCTGCGTCGAAGAGATGCCGGTGGTTTCCGAGG
CTGACGGCACCACCTACGATACCGACCCGGAGCGAGAGGGCAAGTTCACG
GCGTGCACGACGAACGACCTCTGCACCCGCTACGCGGAAGACTACCCCAC
GGGGGAGCTTGCCAACCTCGTCGGCACCTACGACAACGCGGAGTAA back to topCoding sequence (CDS) from alignment at Scaffold_230:310775..314020- >EsuBft811_6a-0001 ID=EsuBft811_6a-0001|Name=EsuBft811_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1332bp|location=Sequence derived from alignment at Scaffold_230:310775..314020- (Ectocarpus subulatus male Bft15b)
ATGAGGCGATCACGATGGGCAGCGGAACGGATGACGGGGGCGAGGAGGAA
GGGGCCGATGGAAAACCCTGATGACGGGGCGTCCTGCTCCACCTACGAGG
AGCATGTGGAAGTCGCGAAACTTCTTGATAGCACTTGTGAATGGGACCCC
TACATGTGCTGCTGGACCGGCAACGACGGAGCGGACGGGATGACGGCGAA
CTCCGACGTCTGCCGCGTACTGGACTACCCGGAAGAGGGAGACTCCTTCG
AAATGCCCCGGGAATCAGAGGGCTTCGTGTGCTGCCACGGCTTCGCCTGG
GCGGAAGGCGCGGACGTGGACACCCACATCCTGCCCCTGTACCACTACGT
GAAGAACGTCGGCCGTACCGAAGAGGCGGGCTTCTACGAGATGAAGCTGC
CGGATAGCGTGGAGGGAACGCCGGAATGCGGGTGCATCGAGGAAATACCT
TCGGTGTCCTGCTCCGAGTGCTCCAGGTACTCCTGGGAGGGGATCGCTGG
TTGCGGCAACAACGGGCTGTTAAGCCAGTACCGCGGTTGCCTGGGCGAGC
CCTGCGGCCCTATGGACGACAATCTGGTGAGGACATGCGACAACGAAGAC
ATTCCCGACTACGACCACGGGTCGTGCAGTCACAACACGTACATGTGCTG
CTTGACGGAGAACGACGGCCAGGGAATGGCAGAAAACACGGTGAGACGTC
GCGTGCCGGCCGTGGCCTCTTGCGTGGAATTTTCTTGCTACAGTGCTGAC
AGGAAGGATGTTGGGCTGACTATGTTGTCTGTTATCTTGGGTCATCTTGG
TGCCACGAAGGACGTGTGCCGTGTGTTGGACTACCCGTCGGTGGGTGGGG
CGTTGGAGTTTGCCGGCGACAGCGAGAGAGAGGCGCACCGCCACGGGTTC
GTATGGACCGAGGACGCCACCGACAAGTACATCCACCTCCTGTCGCAGTT
CGTCCAGAAGTTCGACCACAGGGACAGGAGGGGGTACTACGGAAAGTACA
TTACTGTAGGAAAAGCAGCGCACAACGTCATCATGGTGAATGGGAGAACG
ACTGGTCCAGGCGAGGACAACACGAATAACCCACTGTCTCCTCCTCCAAA
CGTTTCGCATGTCATTCTTGTCGTAACCAGTATCGAGGGCGCCCCCATGT
ACGGCTGCGTCGAAGAGATGCCGGTGGTTTCCGAGGCTGACGGCACCACC
TACGATACCGACCCGGAGCGAGAGGGCAAGTTCACGGCGTGCACGACGAA
CGACCTCTGCACCCGCTACGCGGAAGACTACCCCACGGGGGAGCTTGCCA
ACCTCGTCGGCACCTACGACAACGCGGAGTAA back to top
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