Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft144_19 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 96 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-11_002510.2 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft144_19a-0001 ID=EsuBft144_19a-0001|Name=EsuBft144_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=964bp|location=Sequence derived from alignment at Scaffold_228:444097..445060- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGGTGTTATTTTTTCTCCTCGCGGCGAAGGCATGACGGAGTTCGAAAGAG
GAGGTCGCAACAACGAGAATCATCATCGGGGGGAAGCTTTCATCACGAAG
AAGAGAGACAGCAACAACAACGACAACGACGCGGCGTTTCTGAAGAGCAA
GCGCCAGAGGAGCATGGCTGATCGCCAAGAAGAAGAGCAACATCAGCCGC
CGCAGACTCGCCGGATGGTCACCGACGGTATGGGTTGTGTTGGTTTGGTG
GAGAGGTTGGCCCAGTCGAGTCATTTTCTTGCCGTCCCCTCTCTCAAGAC
GACCAACTTGCCCAACCCCACGGACGAGGCTGTCTCGGAAAGCCGGCTGA
TCCAGACCTCGCCACCAAAATTAATCAACCGCGAAGAGAGTAGCGGCACA
GAAAGTAGCATGAGCGGCAGCATCGCTAACAGCAGCAGCGTTAGTAGCGC
GATGGATGATCGCGAGTCAGTTTTCACTCCGATGACTAACACCGAGGGCG
TCGCCGAGATCGATTCTCCCGCCCCACTCTCGAGCAGTTTCAGTCAAAAG
AAGGGCGACTCGGTTCAACCCCCCGCTGACCGTAGCGAGCAGAGTTCGTC
GAGCGACGAGTGGGTGTGCAGGGCATTTGGGAAAGAAGTATGCGAGAACG
ACATTTCGCACCGCATGTGGTCCTTGAGGAGGCGCGGCTTCGACGAGTAT
GTCATGCGAATAATGGATGAGTGTGTGTATGAGAGCGATGACGAAGATTT
CATGGCGTCCCCGGAGGGTAGAAGAATCAATTTGGACGCAGCAGTCGACG
AACAGCAAGAAGAGGAATTGGTAGCACAAAAGTATGACGGCACCCACGCG
CACGAGCCCCCGCTCCCCGAACCGATAGTGGTGACGCCTGAAAGACTTCT
GTTGTAGATTTGGCGATGACCCGAAATATTACACTGGTTTGTCGTCGTTC
CCCTCATCGCTCCT back to topprotein sequence of EsuBft144_19a-0001 >EsuBft144_19 ID=EsuBft144_19|Name=EsuBft144_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=291bp
MTEFERGGRNNENHHRGEAFITKKRDSNNNDNDAAFLKSKRQRSMADRQE
EEQHQPPQTRRMVTDGMGCVGLVERLAQSSHFLAVPSLKTTNLPNPTDEA
VSESRLIQTSPPKLINREESSGTESSMSGSIANSSSVSSAMDDRESVFTP
MTNTEGVAEIDSPAPLSSSFSQKKGDSVQPPADRSEQSSSSDEWVCRAFG
KEVCENDISHRMWSLRRRGFDEYVMRIMDECVYESDDEDFMASPEGRRIN
LDAAVDEQQEEELVAQKYDGTHAHEPPLPEPIVVTPERLLL back to topmRNA from alignment at Scaffold_228:444097..445060- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft144_19a-0001 ID=EsuBft144_19a-0001|Name=EsuBft144_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=964bp|location=Sequence derived from alignment at Scaffold_228:444097..445060- (Ectocarpus subulatus male Bft15b)
CGGTGTTATTTTTTCTCCTCGCGGCGAAGGCATGACGGAGTTCGAAAGAG
GAGGTCGCAACAACGAGAATCATCATCGGGGGGAAGCTTTCATCACGAAG
AAGAGAGACAGCAACAACAACGACAACGACGCGGCGTTTCTGAAGAGCAA
GCGCCAGAGGAGCATGGCTGATCGCCAAGAAGAAGAGCAACATCAGCCGC
CGCAGACTCGCCGGATGGTCACCGACGGTATGGGTTGTGTTGGTTTGGTG
GAGAGGTTGGCCCAGTCGAGTCATTTTCTTGCCGTCCCCTCTCTCAAGAC
GACCAACTTGCCCAACCCCACGGACGAGGCTGTCTCGGAAAGCCGGCTGA
TCCAGACCTCGCCACCAAAATTAATCAACCGCGAAGAGAGTAGCGGCACA
GAAAGTAGCATGAGCGGCAGCATCGCTAACAGCAGCAGCGTTAGTAGCGC
GATGGATGATCGCGAGTCAGTTTTCACTCCGATGACTAACACCGAGGGCG
TCGCCGAGATCGATTCTCCCGCCCCACTCTCGAGCAGTTTCAGTCAAAAG
AAGGGCGACTCGGTTCAACCCCCCGCTGACCGTAGCGAGCAGAGTTCGTC
GAGCGACGAGTGGGTGTGCAGGGCATTTGGGAAAGAAGTATGCGAGAACG
ACATTTCGCACCGCATGTGGTCCTTGAGGAGGCGCGGCTTCGACGAGTAT
GTCATGCGAATAATGGATGAGTGTGTGTATGAGAGCGATGACGAAGATTT
CATGGCGTCCCCGGAGGGTAGAAGAATCAATTTGGACGCAGCAGTCGACG
AACAGCAAGAAGAGGAATTGGTAGCACAAAAGTATGACGGCACCCACGCG
CACGAGCCCCCGCTCCCCGAACCGATAGTGGTGACGCCTGAAAGACTTCT
GTTGTAGATTTGGCGATGACCCGAAATATTACACTGGTTTGTCGTCGTTC
CCCTCATCGCTCCT back to topCoding sequence (CDS) from alignment at Scaffold_228:444097..445060- >EsuBft144_19a-0001 ID=EsuBft144_19a-0001|Name=EsuBft144_19a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=876bp|location=Sequence derived from alignment at Scaffold_228:444097..445060- (Ectocarpus subulatus male Bft15b)
ATGACGGAGTTCGAAAGAGGAGGTCGCAACAACGAGAATCATCATCGGGG
GGAAGCTTTCATCACGAAGAAGAGAGACAGCAACAACAACGACAACGACG
CGGCGTTTCTGAAGAGCAAGCGCCAGAGGAGCATGGCTGATCGCCAAGAA
GAAGAGCAACATCAGCCGCCGCAGACTCGCCGGATGGTCACCGACGGTAT
GGGTTGTGTTGGTTTGGTGGAGAGGTTGGCCCAGTCGAGTCATTTTCTTG
CCGTCCCCTCTCTCAAGACGACCAACTTGCCCAACCCCACGGACGAGGCT
GTCTCGGAAAGCCGGCTGATCCAGACCTCGCCACCAAAATTAATCAACCG
CGAAGAGAGTAGCGGCACAGAAAGTAGCATGAGCGGCAGCATCGCTAACA
GCAGCAGCGTTAGTAGCGCGATGGATGATCGCGAGTCAGTTTTCACTCCG
ATGACTAACACCGAGGGCGTCGCCGAGATCGATTCTCCCGCCCCACTCTC
GAGCAGTTTCAGTCAAAAGAAGGGCGACTCGGTTCAACCCCCCGCTGACC
GTAGCGAGCAGAGTTCGTCGAGCGACGAGTGGGTGTGCAGGGCATTTGGG
AAAGAAGTATGCGAGAACGACATTTCGCACCGCATGTGGTCCTTGAGGAG
GCGCGGCTTCGACGAGTATGTCATGCGAATAATGGATGAGTGTGTGTATG
AGAGCGATGACGAAGATTTCATGGCGTCCCCGGAGGGTAGAAGAATCAAT
TTGGACGCAGCAGTCGACGAACAGCAAGAAGAGGAATTGGTAGCACAAAA
GTATGACGGCACCCACGCGCACGAGCCCCCGCTCCCCGAACCGATAGTGG
TGACGCCTGAAAGACTTCTGTTGTAG back to top
|