EsuBft3934_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft3934_3a-0001 ID=EsuBft3934_3a-0001|Name=EsuBft3934_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1281bp|location=Sequence derived from alignment at Scaffold_106:72214..74276+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGACATGGTCCCCACGCCGCGACCACTACCGGCTGCTGCAGACGACACA
CCACCGTCTGCCTCTGCGAGTTATCGGCTACCGGCGCAAACGAGGCACCT
ACCGGCAGCTGTCATACGCCCAGGCGCTGAAGAGGGTCGGCTGCCAGAGC
GTGGAGGCCACTGTCCGTCAACGGTGCCTGCTCTTTGCGGGGGCCATGGC
AAGACAGCCAGACGGGCGGCTTCCGAAACGGCTGATGTTCGGCGAGTTGG
TGGGAGGGGAGAACCCGGGCCGGGGAAGCCCGGAGCAGAACTGGCTGATA
TGCCTGAAGGACGACCTGAAGATGTTCGAAGCCAGACACGGCTCCACGCC
CGACAAGCGGAGCTTCTTCGGAATCCCGAAGCCAGACTGGGACGAGGCGG
CGAAGGTGGAGGGGGGGGTACCGTGGCACGCGGGGGTGCTACAGGGAGCT
GAGAGGTTTATGGCCTCTTGGCACAAGGGCGAGGAGAAGGCCAGCCGACA
ACGAGCCATCAAACGAGGAGACAGCGGGCCCAAAAAGAGTCTAGATACGG
CACCCATCTACGGGGCGGGAGGGGGGCGGGAGGAAACGGCGCGGGAAGAA
AGCAAGCGAGAAGAGACCGACCGCGTGACGTGACATGTTGCGGTTGAATT
TCAGCGACTAGTTTTTCTGTTGCCCTCTCCCCCGTTTGCTGTCGCGAACT
CTACGGATATCCCTGTCTCTGTGCGAGTTTGTTTATGTCCTCGTCTGTCT
TTTGATTTATTTCGTCTTTGTTTTGTTTTTTTCAGTGCTGCACGACTGAA
AAAAATAAAAAGTATGTGAGAAACAACGCTTCCAACGGGAAAGCAGCCCC
CTGTGGAAACCCCTCCGATCAGGCGGCTCGCGGCGCAACAGACCTCCACA
CCCAGCACGGGCTCTAGAGGGCGAACCAGAGGCTAAACTGCCCAGACAAC
TCGAGAGGTATTTAATGCATGGGATAACGGCCGGCACAGGTCGTGCTGAC
AGATGACCCGTCGGAGAGGTAGGGGGGGCAACCGGGCTGGTGGGGCTAAC
AACCCCAGAGGTCAACCGGCTACGCCACCTGCTACACCTCCAAACCAGCC
TAGGAGCTCTGTTACACCCAGAAGCGGGGGTATGCAGCCAGCATGGGACC
TTCGTCAGCTTACGGAAGGCCCGCTAACCCCGCGTACTCCAGTGGTCGAC
AACTCAGGGGGAGACATAACAAGTGAACGTCCACGGATCAGGAGCGGGAG
AGAGGGCAACTTAACCACTGAGGTGCGCACC
back to top

protein sequence of EsuBft3934_3a-0001

>EsuBft3934_3 ID=EsuBft3934_3|Name=EsuBft3934_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=210bp
MTWSPRRDHYRLLQTTHHRLPLRVIGYRRKRGTYRQLSYAQALKRVGCQS
VEATVRQRCLLFAGAMARQPDGRLPKRLMFGELVGGENPGRGSPEQNWLI
CLKDDLKMFEARHGSTPDKRSFFGIPKPDWDEAAKVEGGVPWHAGVLQGA
ERFMASWHKGEEKASRQRAIKRGDSGPKKSLDTAPIYGAGGGREETAREE
SKREETDRVT
back to top

mRNA from alignment at Scaffold_106:72214..74276+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft3934_3a-0001 ID=EsuBft3934_3a-0001|Name=EsuBft3934_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2063bp|location=Sequence derived from alignment at Scaffold_106:72214..74276+ (Ectocarpus subulatus male Bft15b)
ATGACATGGTCCCCACGCCGCGACCACTACCGGCTGCTGCAGACGACACA
CCACCGTCTGCCTCTGCGAGTTATCGGCTACCGGCGCAAACGAGGCACCT
ACCGGCAGCTGTCATACGCCCAGGCGCTGAAGAGGGTCGGCTGCCAGAGC
GTGGAGGCCACTGTCCGTCAACGGTGCCTGCTCTTTGCGGGGGCCATGGC
AAGACAGCCAGACGGGCGGCTTCCGAAACGGCTGATGTTCGGCGAGTTGG
TGGGAGGGGAGAACCCGGGCCGGGGAAGCCCGGAGCAGAACTGGCTGATA
TGCCTGAAGGACGACCTGAAGATGTTCGAAGCCAGACACGGCTCCACGCC
CGACAAGCGGAGCTTCTTCGGAATCCCGAAGCCAGACTGGGACGAGGCGG
CGAAGGTGGAGGGGGGGGTACCGTGGCACGCGGGGGTGCTACAGGGAGCT
GAGAGGTTTATGGCCTCTTGGCACAAGGGCGAGGAGAAGGCCAGCCGACA
ACGAGCCATCAAACGAGGAGACAGCGGGCCCAAAAAGAGTCTAGATACGG
CACCCATCTACGGGGCGGGAGGGGGGCGGGAGGAAACGGCGCGGGAAGAA
AGCAAGCGAGAAGAGACCGACCGCGTGACGTGACATGTTGCGGTTGAATT
TCAGCGACTAGTTTTTCTGTTGCCCTCTCCCCCGTTTGCTGTCGCGAACT
CTACGGATATCCCTGTCTCTGTGCGAGTTTGTTTATGTCCTCGTCTGTCT
TTTGATTTATTTCGTCTTTGTTTTGTTTTTTTCAGTGCTGCACGACTGAA
AAAAATAAAAAGTATGTGAGAAACAACGCTTCCAACGGGAAAGCAGCCCC
CTGTGGAAACCCCTCCGATCAGGCGGCTCGCGGCGCAACAGACCTCCACA
CCCAGCACGGGCTCTAGAGGGCGAACCAGAGGCTAAACTGCCCAGACAAC
TCGAGAGGTATGTTAACACGATGCAAGGGCACATCAGGGTATGTTTTATA
CGCCCAGGTACACATGGTAGGGTGAGAAATTCAGACTCTTAGCTAGAGCA
TACCACACAGCGGCAGCACCAAAATCCACGAGGAAGCATCACACGCGAGC
CGACCTCTGCGCAAGCTTGGCGTGTTGCAGCCCAATTATGCTGCCGACGT
ATACCTAGGTCTCATTGCCACCTAATGCAAAAGGTTTGAGGCGATTTAGT
GCGTTAGAAAATGAGCATGGTGTGTTCAAAATTCAAATTTCAGGAGAGTC
TACGTCGGGGGGTTCGAACGCACGCTCTCGCATGTTGCGCATGTTTAGTC
CACTGGATACACGACCCCCATCCAAAGAAAAAATGGAAATGCTCGATACA
GTCCGGCCGCCACAAAAATTTATAGGAAATATGGACGTCGAAAGAGCAAG
TACGTCTGTCTTGAAGTTAAAATTTAGCTCGGTGCTTGCCATGGTGCGAG
TGAAACATGACCCGGGGCGCTCAGCTACGCGTACTCCAGACCGTTCATCA
GCAGTAGATTGGAACGGCGCAGATATGTCGAGTCGGGCATATAGTCTATA
GTGCGTAGATCGACAGCTTTCAGTCCGTCACGCTCTGAGGTACATAAGCA
TACCCAAACAGAGGATCATATGTTATGCATGGCTGTCAAGAGACAACGAT
AGAACCACACACATAGCATAGGTGTGCGCCTGCGTAGGCTGTACGTGTCA
CGTGACCTTTTGTAATTTTTGGTTGTATACCATGGCCAGGTATTTAATGC
ATGGGATAACGGCCGGCACAGGTCGTGCTGACAGATGACCCGTCGGAGAG
GTAGGGGGGGCAACCGGGCTGGTGGGGCTAACAACCCCAGAGGTCAACCG
GCTACGCCACCTGCTACACCTCCAAACCAGCCTAGGAGCTCTGTTACACC
CAGAAGCGGGGGTATGCAGCCAGCATGGGACCTTCGTCAGCTTACGGAAG
GCCCGCTAACCCCGCGTACTCCAGTGGTCGACAACTCAGGGGGAGACATA
ACAAGTGAACGTCCACGGATCAGGAGCGGGAGAGAGGGCAACTTAACCAC
TGAGGTGCGCACC
back to top

Coding sequence (CDS) from alignment at Scaffold_106:72214..74276+

>EsuBft3934_3a-0001 ID=EsuBft3934_3a-0001|Name=EsuBft3934_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=633bp|location=Sequence derived from alignment at Scaffold_106:72214..74276+ (Ectocarpus subulatus male Bft15b)
ATGACATGGTCCCCACGCCGCGACCACTACCGGCTGCTGCAGACGACACA
CCACCGTCTGCCTCTGCGAGTTATCGGCTACCGGCGCAAACGAGGCACCT
ACCGGCAGCTGTCATACGCCCAGGCGCTGAAGAGGGTCGGCTGCCAGAGC
GTGGAGGCCACTGTCCGTCAACGGTGCCTGCTCTTTGCGGGGGCCATGGC
AAGACAGCCAGACGGGCGGCTTCCGAAACGGCTGATGTTCGGCGAGTTGG
TGGGAGGGGAGAACCCGGGCCGGGGAAGCCCGGAGCAGAACTGGCTGATA
TGCCTGAAGGACGACCTGAAGATGTTCGAAGCCAGACACGGCTCCACGCC
CGACAAGCGGAGCTTCTTCGGAATCCCGAAGCCAGACTGGGACGAGGCGG
CGAAGGTGGAGGGGGGGGTACCGTGGCACGCGGGGGTGCTACAGGGAGCT
GAGAGGTTTATGGCCTCTTGGCACAAGGGCGAGGAGAAGGCCAGCCGACA
ACGAGCCATCAAACGAGGAGACAGCGGGCCCAAAAAGAGTCTAGATACGG
CACCCATCTACGGGGCGGGAGGGGGGCGGGAGGAAACGGCGCGGGAAGAA
AGCAAGCGAGAAGAGACCGACCGCGTGACGTGA
back to top