Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft663_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 86 |
| Hectar predicted targeting category | mitochondrion |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft663_5a-0001 ID=EsuBft663_5a-0001|Name=EsuBft663_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=861bp|location=Sequence derived from alignment at Scaffold_189:129186..130105- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTTACCTCGGCGCCGGCTGGTCCCCGTTTGGCGAGGAGGGTAACGGC
GACGAAGAGGCCAGGAAAAGGCCGAGAGAAGCCGACGACGACAACTGGCG
GGCGGTTTGCCGGTACTGGAGAGGCACCCCCGAAGGCCGCAATTGAGTTG
AACGAACCCCTTTGGTGCTGCGTAGGGGAGTCATCATTGTTCAACGGTGG
CAGCGGAGATATGGGTTGGGTTGTGAACATTACGTCCGCTGCCCCTCTCT
CTCCCCTTGACCGAACTGGCACGGCGAGACGATAACGAATGTCTCGGCAT
CCAAGAATTTACATACAATCGTCTGCCTAGCTTATGGGTCGGCACATGCC
TTCCCCACCAATAGTCTACTGCTTTGCTTACAACGTACCACCTCTACTGC
GGTAAGTGCCCGACCGGGAGAACCGAGAACCGGAGCAGATCAACATGCTT
TTCGCGGTGAATTCGATGACGTTTCACCAGCAAATCGTGCCCTGCAACCG
AAAACGCCGCATAAACCCCCCACAAACCAATGGTATATGACTATAACAAC
CAATAGCCACAAACCAAAGAAGGTGTTGTTAATTTTGTTAATCTGTGTCT
TGACTATTTTCTATGATCGAGATGGCACATCAGCCGCACATGCTCCGCAC
ATATGCATACCAAACTGAGAATATGTTTGTAAACTGATGGAGATTGCATG
TGTTAGAACTAATAGGGTGCGACACACAAAAGCCCGACTACCAACAGTAC
ACAACACCTTTCGCCTGCACCTTCCCAACATAACATAATTGAGACACACA
AGACAGCTACCAAACTGATTTGTTGAGCCTGTTACCCACAGGGGAGATGT
CCTAATATGCT back to topprotein sequence of EsuBft663_5a-0001 >EsuBft663_5 ID=EsuBft663_5|Name=EsuBft663_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=94bp
MVTSAPAGPRLARRVTATKRPGKGREKPTTTTGGRFAGTGEAPPKAAIEL
NEPLWCCVGESSLFNGGSGDMGWVVNITSAAPLSPLDRTGTARR back to topmRNA from alignment at Scaffold_189:129186..130105- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft663_5a-0001 ID=EsuBft663_5a-0001|Name=EsuBft663_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=920bp|location=Sequence derived from alignment at Scaffold_189:129186..130105- (Ectocarpus subulatus male Bft15b)
ATGGTTACCTCGGCGCCGGCTGGTCCCCGTTTGGCGAGGAGGGTAACGGC
GACGAAGAGGCCAGGAAAAGGCCGAGAGAAGCCGACGACGACAACTGGCG
GGTATGAGACGTGCTTGTCTTCGGCCTGGGCACAAGGTTTACCGCTTTCG
CCTCGAACAGGCGGTTTGCCGGTACTGGAGAGGCACCCCCGAAGGCCGCA
ATTGAGTTGAACGAACCCCTTTGGTGCTGCGTAGGGGAGTCATCATTGTT
CAACGGTGGCAGCGGAGATATGGGTTGGGTTGTGAACATTACGTCCGCTG
CCCCTCTCTCTCCCCTTGACCGAACTGGCACGGCGAGACGATAACGAATG
TCTCGGCATCCAAGAATTTACATACAATCGTCTGCCTAGCTTATGGGTCG
GCACATGCCTTCCCCACCAATAGTCTACTGCTTTGCTTACAACGTACCAC
CTCTACTGCGGTAAGTGCCCGACCGGGAGAACCGAGAACCGGAGCAGATC
AACATGCTTTTCGCGGTGAATTCGATGACGTTTCACCAGCAAATCGTGCC
CTGCAACCGAAAACGCCGCATAAACCCCCCACAAACCAATGGTATATGAC
TATAACAACCAATAGCCACAAACCAAAGAAGGTGTTGTTAATTTTGTTAA
TCTGTGTCTTGACTATTTTCTATGATCGAGATGGCACATCAGCCGCACAT
GCTCCGCACATATGCATACCAAACTGAGAATATGTTTGTAAACTGATGGA
GATTGCATGTGTTAGAACTAATAGGGTGCGACACACAAAAGCCCGACTAC
CAACAGTACACAACACCTTTCGCCTGCACCTTCCCAACATAACATAATTG
AGACACACAAGACAGCTACCAAACTGATTTGTTGAGCCTGTTACCCACAG
GGGAGATGTCCTAATATGCT back to topCoding sequence (CDS) from alignment at Scaffold_189:129186..130105- >EsuBft663_5a-0001 ID=EsuBft663_5a-0001|Name=EsuBft663_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=285bp|location=Sequence derived from alignment at Scaffold_189:129186..130105- (Ectocarpus subulatus male Bft15b)
ATGGTTACCTCGGCGCCGGCTGGTCCCCGTTTGGCGAGGAGGGTAACGGC
GACGAAGAGGCCAGGAAAAGGCCGAGAGAAGCCGACGACGACAACTGGCG
GGCGGTTTGCCGGTACTGGAGAGGCACCCCCGAAGGCCGCAATTGAGTTG
AACGAACCCCTTTGGTGCTGCGTAGGGGAGTCATCATTGTTCAACGGTGG
CAGCGGAGATATGGGTTGGGTTGTGAACATTACGTCCGCTGCCCCTCTCT
CTCCCCTTGACCGAACTGGCACGGCGAGACGATAA back to top
|