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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft105_5 |
| Protein domains | SignalP-TM |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 421 |
| Hectar predicted targeting category | mitochondrion |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft105_5a-0001 ID=EsuBft105_5a-0001|Name=EsuBft105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4212bp|location=Sequence derived from alignment at Scaffold_100:622663..626927+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CATTAAAAACCATCCCGGTCTCTCTATCCAGTACCTCCTTCTGTCTCAAT CTCTCCGTACTAATCCATCACTTGACTCGGCCAATTTCCGTGGTCACAGG CTAACGTACCTAGAAAAGGTATACCAAAATAAAATGGACCCCAAGGGTCA GCAGAGCGATAAAATACAAGAAAACAAAATATAATCAGAAACAAATAAAA TAAAATAAAATAAATAATTAGACTAGTGGAACGGCCGCACCACCAGCCTG GGGGGGTAGCCTCCCACTACATGGAGGCAGGTCGACGGCCAAAGGAAGGG GCGGGGGTACGTGCCAGTAAAAAACAAAACAAAAGACAAAATAAAACAGA ATAAAGCAAAGACGAGGACACAAACAAACTCGCACAGAGACAGGGATATC CCTAGAGACAGTCTGAACGCGACAGCAAACGAGGGAGAGGGCAACAGAAA AATTAGTCGTTGAAATTCGACCGCAACATGTCACGTCACGCGGTCGGTCT CTTCTCGCTTGCTTTCTTCCCGCCGCGCCGTTTCCTTCCGCCCCCCTACC GCCCCGTTGATTGGTGCCGTATCTAGACTATTTTTGGGCCCGCTGTCTCC TCGTTTGATGGCTCGTTGTCGGCTGGCCTCCTCCTTGCCCTTGTGCCAAG AGGCCATGAACCTCTCAGCTCCCTGTAGCACCCCCGCGTGCCACGGTACC CCCCCCTCCACCTTCGCCGCCTCACTCCAGACTAACTTCGGGACTCCGAA GACGCTCGGCTTGTCGGTCGTGGAGCCGTACCTGGCTTCGAACATCTTCA TGTCGTCCTTCAGGCATGTCAGCCAGTTCTGCTCCGGGTTTCCCTGGCCC GGGTCCTCCCCTCCCACCAACTCGCCGAACATCAGCCGTTTCGGAAGCCG CCCGTCCGGCTGTCTTGCCACGGCCCCCGCAAAGAGCAGGCGCCGTTGAC GGACAGTGGCCTCCACGCTCTGGCAGCCGACCCTCTTTAGCGCCTGGGCG TATGACAGCTGCCGGTAGGTGCCTCGTTTGCGCCGGTAGCCGATAACTCG CAGAAGTAGACGGTGGTGTGTCGTCTGCAGCAGCCGGTAGTGGTCGCGGC GTGGGGACCATGTCATGCAGCCGTATAGCAGTGCCTCCACTGCCTCCGCC TGGAGCAGGCGGGCTTTGAGGCGAAACGGTGCTCCCGGTCGGTCGAAGAG CTCCGTGGCGTATCGCTTAATGCACGCCCACGCTGCTTTGCTCCTGTGGT TGATCTCTCGGGTAAGGTCGCCCTGCTCGTTGACGAGGCCGCCCAGGTAT CGGAACTCGGTCGTCTGTGCGTACCTTTGCCCCGCTGCTTCGATGGTCAG CACCGGCGGTGGCGGCGGCGGCGGTCGCTGTCTCTCCTTCACCCGCATCA CCAGGGTCTCCGTCTTCCTCTCCGACACCGTCAGCCCGAACTCCCGGAAC ACCTCCACGATAATGGTCATCATCCTCGCCAGGCCGTCGGCGGACTTCGA CACAACGCCGGCATCGTCGGCATATAGCATCCCCCACACCGCCCTCCGGA CTCGGTCCAGCAATCCCCCCCCCCTCCGTTCCTCCTCCTTCAAGTACACT AGGTCCCGCACGATAACCTCATCTTGGCTGAACCGTGTGACAATGATCTC GAGAGGCGCTGCGAAGAAGACGTTGAACAGCAGTGGGGACATTGAGCACC CTTGTCGTAATCCCTGCGTGACCGGGAACCAGTCCGATAGCTCCCCATCG TCCGTGCGGACCCGGGCCCGCATTCCGACGTGGAACTTGCGGATGACGGC GATCATCTCCCCGGGGATCCCGGCCCGGGCCAGCACCTTCCACAGTAGCT CCCGGTCCACCGAGTCATATGCCTTCTGCAGATCGATGAAGCACATGTAG AGCGGGATTCTCCTCCTCCGCCCCAGCTCCTGGAGTCGGCGCACAACGAA CAGCATGCATACCGTGGATCGGCCAGGCCGGAACCCGCACTGTTCCTCCG GGAGGATTTCGTTGGCTTCGCAGAATGCGCTCAGGCGGTTGGTGATGGTC TTGGCGAGTACTTTGCCTACATGCGAGAGCAGCGAGATGCCCCTGTAGTT GTTGCAGTTCGAACGGTCACCCTTCTTGTACAGCACCTTAATGATGGCAT CCTTCCACTCCTGCGGCATCTCTCCCCCATTCCACACTTCGACGAAGATG GCACGGAGGCGCTCCAGTACAACTGGCTCGTCGTCGCCGTCGACCTTGAG CAGTTCGGCGGCAAGGAGGTCGGGACCAACCGCCTTCCAGTTCCCCAGGC CTTTCGTCGCCGCCTCAACCTCCTCGAGGTCTGGTACCGCCGCCAGGTGT CGGGTGGCGCGCGTCGCTGGTCGCTGCATCACCTGTTCGACAACGTCTGG GTTCAGAGTGGGGGACTTGGAGTTCAGGAGGGTATTGAAGAATCTCCGCC ACCGCTTGAGGATGGCATCCTTGTTCCGGAGTAGCACGCCGTTCTCGTCT GTAACGAACTGCTGCCCCCCAGCTTGTCTCCCGCTGAGGCCCGTTGACCG CTTGAGGTGTTGGTACAGCCCCCGCATGTCGCGGTCCTGGTAGATCGCTT CGAGCTCCGTCACGTATCTTTCCAGGTGGTCGTAGATGCTCGTTGCGATT GTTGCCTTCACCCCCTTGCACGTTGCTTTGAGGATCCTCCACGTTGCTGC GTTCGGTCCGGCCTTGAAGGAATGTCGCGCAGCCCGTCGCTTGTCAAGGG CGGTCGCCAGGGCTGTCCGTGCCGCGGTGGTCATGTTCCATTCCGTGGTG CGCCGCCTCCGGGGTTCCTCAGACAGCTCCGTCTCCGCCGCGCCGAGCAG GGCCTCCGTGAACTCCTTCGCCATTTCCTGCGTGGTGGTCGCCGGCGCGC CCGACCTCGCGAGCAGGTTGCAGAGAAACCGTTGGGATACAGCCCATCGC GCTGCCTCGACCTGCAGATCTTGTCGGTTGAACTGCCGCCGTTTGGGGTT GGTCCGGATAGGTCGGTTGTGGGCCAGCCGGCCACCGAGGTCGACGGTGG CTACTACGATGTTGTGGTCTGAGTCCGCTCTGACTGGGCGCACTGGCTGA GGTACGACCTCCATGTTGGACACTCGGTCGCGGTGTGCTTGGCGCGTCAG GATGTAATCGAGGCACCTACGTTCGCGTCCCGACGGGCCGTTGAACGTAT GCCATATCCCGCCCCTCCGTGTGTCGAAGAAGGTGTTGAGGACCGCTAAT CTGTTGTCCGTGGCGAAAGTCAGCAGCAGCTCACCATTTTCGTTCAGCTC ATTGCGCCCGTACTCGCCCATGGTTCCTTCGTTTTCCCCTGCTATCCCTC CTCCGGTCTGGGCATTGGCATCCATGAGCACGAAAAGATACTCCTTAGCG GGGATACGACGCACGAGACTGTCAAGTTTTTCCCAGAACATGTGTTTGCT CTCGGTGGTGGCCACGTCTGTTGGGGCATACGCAGCCACGAAGGTCACCG CTCCGCGGTGGCCCATCATCTCAAACCTCATAGCCATGAGGCGCTCGTCC ACGTACTCCGTGGTGTACTGGGAGGATTTGCACAGCGTCTCCTCCACAGC GATTCCGACGCCATGCGTACCACCCTTGTCCGTGCCACAGGTGAACACCC GAAAACCGGATGCTGCGAACTCCGTTCGCCCTGGTCTCCTGACCTCCTGC AGACCGACAAACGAAATGCCCTGTTTCGCTGCCTCGTGTAAGACGCTGTC GGCTCTCCCATAGCCGTTGGCCCCGTTCACGGCCAGTGTACGCACATTGT AGGTTGCTACCCTAACAAGTCGACCCTGCCGCCTCTGCCGGGCGGTGCGT GCTGCATCCCTAATCAGCCTACGCACCTTCCGGCCCCTCCTCCTCTTCTT CCTTCCTTTTTTTATTTTCTTTATTTTTATTGCTCTGCGGATCCTCGGGT TAATGTAAGAGTTAACCCGGTGCTTGCCTTTCCCAGCGAGGTGTCTTCCT GTCCCGGAGCGGCGTGGCTCTCCAGCTCTGGACCCTTTCCGTCCCCCTGT TGGGTGCTTACCCACACGGTGTGCGATCATCCCGCCACCCTCTCCGTGCT CTCCACCGCTGCCTTGCCCCGGTGTCCAAACCGGGGCATTTGGGTTCAAA CCCATCGGCAGCTGTCTCCAAGTTGGCTTATCACCATGGTTGCTTGTCAT CTCATAACCGGG back to topprotein sequence of EsuBft105_5a-0001 >EsuBft105_5 ID=EsuBft105_5|Name=EsuBft105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=113bp
MARCRLASSLPLCQEAMNLSAPCSTPACHGTPPSTFAASLQTNFGTPKTL GLSVVEPYLASNIFMSSFRHVSQFCSGFPWPGSSPPTNSPNISRFGSRPS GCLATAPAKSRRR back to topmRNA from alignment at Scaffold_100:622663..626927+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft105_5a-0001 ID=EsuBft105_5a-0001|Name=EsuBft105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4265bp|location=Sequence derived from alignment at Scaffold_100:622663..626927+ (Ectocarpus subulatus male Bft15b) CATTAAAAACCATCCCGGTCTCTCTATCCAGTACCTCCTTCTGTCTCAAT
CTCTCCGTACTAATCCATCACTTGACTCGGCCAATTTCCGTGGTCACAGG
CTAACGTACCTAGAAAAGGTATACCAAAATAAAATGGACCCCAAGGGTCA
GCAGAGCGATAAAATACAAGAAAACAAAATATAATCAGAAACAAATAAAA
TAAAATAAAATAAATAATTAGACTAGTGGAACGGCCGCACCACCAGCCTG
GGGGGGTAGCCTCCCACTACATGGAGGCAGGTCGACGGCCAAAGGAAGGG
GCGGGGGTACGTGCCAGTAAAAAACAAAACAAAAGACAAAATAAAACAGA
ATAAAGCAAAGACGAGGACACAAACAAACTCGCACAGAGACAGGGATATC
CCTAGAGACAGTCTGAACGCGACAGCAAACGAGGGAGAGGGCAACAGAAA
AATTAGTCGTTGAAATTCGACCGCAACATGTCACGTCACGCGGTCGGTCT
CTTCTCGCTTGCTTTCTTCCCGCCGCGCCGTTTCCTTCCGCCCCCCTACC
GCCCCGTTGATTGGTGCCGTATCTAGACTATTTTTGGGCCCGCTGTCTCC
TCGTTTGATGGCTCGTTGTCGGCTGGCCTCCTCCTTGCCCTTGTGCCAAG
AGGCCATGAACCTCTCAGCTCCCTGTAGCACCCCCGCGTGCCACGGTACC
CCCCCCTCCACCTTCGCCGCCTCACTCCAGACTAACTTCGGGACTCCGAA
GACGCTCGGCTTGTCGGTCGTGGAGCCGTACCTGGCTTCGAACATCTTCA
TGTCGTCCTTCAGGCATGTCAGCCAGTTCTGCTCCGGGTTTCCCTGGCCC
GGGTCCTCCCCTCCCACCAACTCGCCGAACATCAGCCGTTTCGGAAGCCG
CCCGTCCGGCTGTCTTGCCACGGCCCCCGCAAAGAGCAGGCGCCGTTGAC
GGACAGTGGCCTCCACGCTCTGGCAGCCGACCCTCTTTAGCGCCTGGGCG
TATGACAGCTGCCGGTAGGTGCCTCGTTTGCGCCGGTAGCCGATAACTCG
CAGAAGTAGACGGTGGTGTGTCGTCTGCAGCAGCCGGTAGTGGTCGCGGC
GTGGGGACCATGTCATGCAGCCGTATAGCAGTGCCTCCACTGCCTCCGCC
TGGAGCAGGCGGGCTTTGAGGCGAAACGGTGCTCCCGGTCGGTCGAAGAG
CTCCGTGGCGTATCGCTTAATGCACGCCCACGCTGCTTTGCTCCTGTGGT
TGATCTCTCGGGTAAGGTCGCCCTGCTCGTTGACGAGGCCGCCCAGGTAT
CGGAACTCGGTCGTCTGTGCGTACCTTTGCCCCGCTGCTTCGATGGTCAG
CACCGGCGGTGGCGGCGGCGGCGGTCGCTGTCTCTCCTTCACCCGCATCA
CCAGGGTCTCCGTCTTCCTCTCCGACACCGTCAGCCCGAACTCCCGGAAC
ACCTCCACGATAATGGTCATCATCCTCGCCAGGCCGTCGGCGGACTTCGA
CACAACGCCGGCATCGTCGGCATATAGCATCCCCCACACCGCCCTCCGGA
CTCGGTCCAGCAATCCCCCCCCCCTCCGTTCCTCCTCCTTCAAGTACACT
AGGTCCCGCACGATAACCTCATCTTGGCTGAACCGTGTGACAATGATCTC
GAGAGGCGCTGCGAAGAAGACGTTGAACAGCAGTGGGGACATTGAGCACC
CTTGTCGTAATCCCTGCGTGACCGGGAACCAGTCCGATAGCTCCCCATCG
TCCGTGCGGACCCGGGCCCGCATTCCGACGTGGAACTTGCGGATGACGGC
GATCATCTCCCCGGGGATCCCGGCCCGGGCCAGCACCTTCCACAGTAGCT
CCCGGTCCACCGAGTCATATGCCTTCTGCAGATCGATGAAGCACATGTAG
AGCGGGATTCTCCTCCTCCGCCCCAGCTCCTGGAGTCGGCGCACAACGAA
CAGCATGCATACCGTGGATCGGCCAGGCCGGAACCCGCACTGTTCCTCCG
GGAGGATTTCGTTGGCTTCGCAGAATGCGCTCAGGCGGTTGGTGATGGTC
TTGGCGAGTACTTTGCCTACATGCGAGAGCAGCGAGATGCCCCTGTAGTT
GTTGCAGTTCGAACGGTCACCCTTCTTGTACAGCACCTTAATGATGGCAT
CCTTCCACTCCTGCGGCATCTCTCCCCCATTCCACACTTCGACGAAGATG
GCACGGAGGCGCTCCAGTACAACTGGCTCGTCGTCGCCGTCGACCTTGAG
CAGTTCGGCGGCAAGGAGGTCGGGACCAACCGCCTTCCAGTTCCCCAGGC
CTTTCGTCGCCGCCTCAACCTCCTCGAGGTCTGGTACCGCCGCCAGGTGT
CGGGTGGCGCGCGTCGCTGGTCGCTGCATCACCTGTTCGACAACGTCTGG
GTTCAGAGTGGGGGACTTGGAGTTCAGGAGGGTATTGAAGAATCTCCGCC
ACCGCTTGAGGATGGCATCCTTGTTCCGGAGTAGCACGCCGTTCTCGTCT
GTAACGAACTGCTGCCCCCCAGCTTGTCTCCCGCTGAGGCCCGTTGACCG
CTTGAGGTGTTGGTACAGCCCCCGCATGTCGCGGTCCTGGTAGATCGCTT
CGAGCTCCGTCACGTATCTTTCCAGGTGGTCGTAGATGCTCGTTGCGATT
GTTGCCTTCACCCCCTTGCACGTTGCTTTGAGGATCCTCCACGTTGCTGC
GTTCGGTCCGGCCTTGAAGGAATGTCGCGCAGCCCGTCGCTTGTCAAGGG
CGGTCGCCAGGGCTGTCCGTGCCGCGGTGGTCATGTTCCATTCCGTGGTG
CGCCGCCTCCGGGGTTCCTCAGACAGCTCCGTCTCCGCCGCGCCGAGCAG
GGCCTCCGTGAACTCCTTCGCCATTTCCTGCGTGGTGGTCGCCGGCGCGC
CCGACCTCGCGAGCAGGTTGCAGAGAAACCGTTGGGATACAGCCCATCGC
GCTGCCTCGACCTGCAGATCTTGTCGGTTGAACTGCCGCCGTTTGGGGTT
GGTCCGGATAGGTCGGTTGTGGGCCAGCCGGCCACCGAGGTCGACGGTGG
CTACTACGATGTTGTGGTCTGAGTCCGCTCTGACTGGGCGCACTGGCTGA
GGTACGACCTCCATGTTGGACACTCGGTCGCGGTGTGCTTGGCGCGTCAG
GATGTAATCGAGGCACCTACGTTCGCGTCCCGACGGGCCGTTGAACGTAT
GCCATATCCCGCCCCTCCGTGTGTCGAAGAAGGTGTTGAGGACCGCTAAT
CTGTTGTCCGTGGCGAAAGTCAGCAGCAGCTCACCATTTTCGTTCAGCTC
ATTGCGCCCGTACTCGCCCATGGTTCCTTCGTTTTCCCCTGCTATCCCTC
CTCCGGTCTGGGCATTGGCATCCATGAGCACGAAAAGATACTCCTTAGCG
GGGATACGACGCACGAGACTGTCAAGTTTTTCCCAGAACATGTGTTTGCT
CTCGGTGGTGGCCACGTCTGTTGGGGCATACGCAGCCACGAAGGTCACCG
CTCCGCGGTGGCCCATCATCTCAAACCTCATAGCCATGAGGCGCTCGTCC
ACGTACTCCGTGGTGTACTGGGAGGATTTGCACAGCGTCTCCTCCACAGC
GATTCCGACGCCATGCGTACCACCCTTGTCCGTGCCACAGGTGAACACCC
GAAAACCGGATGCTGCGAACTCCGTTCGCCCTGGTCTCCTGACCTCCTGC
AGACCGACAAACGAAATGCCCTGTTTCGCTGCCTCGTGTAAGACGCTGTC
GGCTCTCCCATAGCCGTTGGCCCCGTTCACGGCCAGTGTACGCACATTGT
AGGTTGCTACCCTAACAAGTCGACCCTGCCGCCTCTGCCGGGCGGTGCGT
GCTGCATCCCTAATCAGCCTACGCACCTTCCGGCCCCTCCTCCTCTTCTT
CCTTCCTTTTTTTATTTTCTTTATTTTTATTGCTCTGCGGATCCTCGGGT
TAATGTAAGAGTTAACCCGGTGCTTGCCTTTCCCAGCGAGGTGTCTTCCT
GTCCCGGAGCGGCGTGGCTCTCCAGCTCTGGACCCTTTCCGTCCCCCTGT
TGGGTGCTTACCCACACGGTGTGCGATCATCCCGCCACCCTCTCCGTGCT
CTCCACCGCTGCCTTGCCCCGGTGTCCAAACCGGGGCATTTGGGTTCAAA
CCCATCGGCAGCTGTCTCCAAGTTGGCTTATCACCGTATGTCCTGTAAAC
ACATGTCCGCGTACCGCATACATGCTGCAACCGCCCAGATGGTTGCTTGT
CATCTCATAACCGGG back to topCoding sequence (CDS) from alignment at Scaffold_100:622663..626927+ >EsuBft105_5a-0001 ID=EsuBft105_5a-0001|Name=EsuBft105_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=342bp|location=Sequence derived from alignment at Scaffold_100:622663..626927+ (Ectocarpus subulatus male Bft15b) ATGGCTCGTTGTCGGCTGGCCTCCTCCTTGCCCTTGTGCCAAGAGGCCAT GAACCTCTCAGCTCCCTGTAGCACCCCCGCGTGCCACGGTACCCCCCCCT CCACCTTCGCCGCCTCACTCCAGACTAACTTCGGGACTCCGAAGACGCTC GGCTTGTCGGTCGTGGAGCCGTACCTGGCTTCGAACATCTTCATGTCGTC CTTCAGGCATGTCAGCCAGTTCTGCTCCGGGTTTCCCTGGCCCGGGTCCT CCCCTCCCACCAACTCGCCGAACATCAGCCGTTTCGGAAGCCGCCCGTCC GGCTGTCTTGCCACGGCCCCCGCAAAGAGCAGGCGCCGTTGA back to top
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