EsuBft1029_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1029_3a-0001 ID=EsuBft1029_3a-0001|Name=EsuBft1029_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1428bp|location=Sequence derived from alignment at Scaffold_70:303776..308655- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CAGCGTCGCTTTGGCGGCATGGGGTGGGCTTAATTTGTTCGCTCTCACAG
AGGGGGAGGGCGACAGTTGTCTACTAACCATGGGTCTCAATGGAACGAGA
CAATGCGTGGTGGCGATGGCTGCCTTGAGCCTGGGCGGTGTTGGTGTGGA
TAGCTTCCTTGTGCCACAGCAGCGGTTCGGCGGCAGCAGCTGTGCAAGAT
CATGTTTGAGAGTAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCACGAGGCTGGAAGAAGATCGTCGTCCTC
CGTGACTAGGATGGCTGCTACCGCAGAGATCGGTTCCTTCCCGTACGAAG
ATGTGCTGCCGTTTCTCAAGGAGCACGTGCAGCCTTCCGACCAGATGCTG
CTGCTGGGGTGTGGGACAGAACTTCCTTTGCAGCTCTCTCGGGATGGCTA
CGGCACTCGAGATGGCCGATCGTTCATGCGCTGCATCGACTCCGACCCCG
ACTTGATAGCGGCCATGAAGAATGCGGCCGAGGCAGATCCCGTCTGCTCG
AAGAACATGGCTGCCGGGAAATTGATTTTCGAGGCGTTGGACGTGGCCGG
AGGCATGCCGGAGCTCACACAATCTTCTGCTGACTGCGTCATTGACGCTG
GTCTACTGGACAAGCTTATCACAACGGAGGGACTTGACGCCGCGAAGGCG
TGCTCCGACGCCGCCCACCGTGCCGTGCGCCTTGGAAACCCTTTGGTGGC
GTTGTCCATGATCAACAAGGACGACTTCGCCCAAATATTTGACGGAAACT
GGGGGTGGATGCAAGAGCTGGATGGGGACCCCGGCGCGGTAAGCCAGTGG
TACCGGGACAAGAAGGTCAACCTCAAGGACGTGGGCAACAACTTCGTTGA
GCTGGGGATATCCTTCTTCGTGTACACCAACGTGGATAACTGCTGACGGG
TCCTTTAGAACGAAGGGGCGAACGTCGGGAGGAGCGGCACTTGTAAACAA
GCCGTATGGTGTTTAAGGTGTTCAACGAGCATTCAAGTATCTGGGGGTTA
GAGTGCGTGTCGATAGAAGAAAATGCGCGAGCGCGATAAGCATTGATGAT
AGTAAGCGTGTTGGTCGAGGTGGGTTAGGGAATGTTCTGAAGGGCCTCCT
GGCGCGGATGGTCCTGGTGAGGCACGTCGAACTCGACACTCCTCGAAGCC
GAGGTACGGTGGACCGCCTGCTGGAGGATACAAATCCTTCACCGTTCACT
CACTTTTGGAGCACTGGCTGTAAATACAGTTACCAGGTGCTATGCATCTC
GACCAGCATAGGAGTATACGATGGACGCTGGTCACAGCAGTTATTCGAGA
TGAACCGCTCTATTTTCATGGCGGGTGGATGAGAAAACGAAAAACCCTAT
TCGTTCTGCGAAATGAGACCCATCTGTC
back to top

protein sequence of EsuBft1029_3a-0001

>EsuBft1029_3 ID=EsuBft1029_3|Name=EsuBft1029_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=288bp
MGLNGTRQCVVAMAALSLGGVGVDSFLVPQQRFGGSSCARSCLRVEQQQQ
QQQQQQQQQQQQQQHEAGRRSSSSVTRMAATAEIGSFPYEDVLPFLKEHV
QPSDQMLLLGCGTELPLQLSRDGYGTRDGRSFMRCIDSDPDLIAAMKNAA
EADPVCSKNMAAGKLIFEALDVAGGMPELTQSSADCVIDAGLLDKLITTE
GLDAAKACSDAAHRAVRLGNPLVALSMINKDDFAQIFDGNWGWMQELDGD
PGAVSQWYRDKKVNLKDVGNNFVELGISFFVYTNVDNC
back to top

mRNA from alignment at Scaffold_70:303776..308655-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1029_3a-0001 ID=EsuBft1029_3a-0001|Name=EsuBft1029_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4880bp|location=Sequence derived from alignment at Scaffold_70:303776..308655- (Ectocarpus subulatus male Bft15b)
CAGCGTCGCTTTGGCGGCATGGGGTGGGCTTAATTTGTTCGCTCTCACAG
AGGGGGAGGGCGACAGTTGTCTACTAACCATGGGTCTCAATGGAACGAGA
CAATGCGTGGTGGCGATGGCTGCCTTGAGCCTGGGCGGTGTTGGTGTGGA
TAGCTTCCTTGTGCCACAGCAGCGGTTCGGCGGCAGCAGCTGTGCAAGAT
CATGTTTGAGAGTAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCACGAGGCTGGAAGAAGATCGTCGTCCTC
CGTGACTAGGATGGCTGCTACCGCAGAGGTGAGCTTGGGACTGCTACATC
ATCAGTCGGCTGCAGAGACGTCGAGTGGTTCAAGAACAATTACCAAAATT
CTATGCGTCCTCTCGTGTGCGGGCTTTCATGATGAATGCCTGTCCTCCTG
CTGCATGTAGACTATACCTGTACTCAAACTGCTGTGTGCACACACGTTTG
TTTTCCGTTCTATGGTCGACGGTGGAACATTGACCGCTGCTCTATGCAGG
AAAGTTTGCGTTGAATCAACATGGCCGTTCAAACGCAAAGCTCCTTTGTG
CACCGGTGTACCGTATGTCAGTAGTGCTACGTTACCTGGCACGTGGCAGT
ATACGCTATTTACCACCCCTCCAGAAAAAATCAGAGACGCAAGGAAGCTA
CAAGGGGTTCAAAATTTGGCTGTGTATCTACGGGCGTACAACATGGAGAA
GGAGAAGTTTCCGTGAATAGCTTGGGAGGTGAAGTGTGCAAACAAGAAGA
AGGGGTAGCTAACCCACGGAGTGGGTTAAAGTTGTAGATGACGTATGGAA
GGAGTTCGAGTTGACCAAGGAAGTGAGTGGAAACGGTTGTAGGTCTAGAG
GGTGACAAGAAGATTGAATGTCAGATTAAAGACTGGGGACATTGGCCTTC
GAGAACGTAGGCGAAGATTGAGGAAGGTAGATGATGATGACGACGAATTC
AAATGTGAATGCGGCTCGGAGTGCGAACACCGGGGTCATGTAGGTGGAGA
ATGTCCGTCGTACGAAAGGAGAGAGAAATATGCATAACTGGGCTGAGAAA
AAGAAGGAAGATAGACAGGGAGCTGTTTTGCGGCATGGAACTACTGGGGC
ATAGTAAGTGGGTTGAATAGGCGGGAGGTTATATCGAAATGATAGATAGG
CTAGGGAAAACACTCCTGAGGCACCATAGGTAAAGTGGGAACGAATGATT
GACCATCGGTGATCGGTCCTGTGGGACCAATCAATCGTGCTCAATGGCCA
ACCGCAATAAGGCGCGCAAAAATTGAGTACCCCCCCGTCCTCGAAAATAC
GTGCTAAAAAAAGTGGTATCTACCATTGCACGCAACTTGCACCTTACCAT
AGGGGCACTAAAGTAGTAGACACGGCACCCCAAGGTCGGTTACTCCACGA
CGAAGCGGATATTTAAATTACCGGCACATCGTCGGAAAGCCCTCGACGAG
ACGGTGCCAGCGCCTGTCGGAGCCGCCACTCTCCCTTGTGAAGTAATTGA
GCTTTGGAACAATCGGTCGAGGGGTGCAATATCCCATGTAACCTACGGCA
CTCCAGGAGTCTTGAGACGATCTACGTAGGACGTAGGACAATCTGCTGGT
GCCTTTGCGCATGCCGTTTTTTCGTGCTGCTTAGTTTGATGCCGTTGATG
ATCGGCCACGGTGGGAAACAGATCGGTTCCTTCCCGTACGAAGATGTGCT
GCCGTTTCTCAAGGAGCACGTGCAGCCTTCCGACCAGATGCTGCTGCTGG
GGTGTGGGACAGAACTTCCTTTGCAGCTCTCTCGGGATGGCTACGGCACT
CGGTGAGACACTCTGCCTACCCGGCCCATGTAGCAGATGCGCTCGTGCGC
TCTCTGTGCACTTGTCTGCCACACACTACGGACCGGCCGCTGGGGGTGCC
ACCAGGTATAGAGCGCAAGGTGTGTTTTGGATTATGTCCACAGTCCCCCC
GTACATTACAAGAAAACGAGTGGACTTGACTTTGGCCTAGAGTCTCTATC
AACTACCGCTGTCCCGTCGATGATTTAGGGGACAACAATCGAAAGGATTT
CAGACTCGGGAGAGAAAGGAGTCCTCCAAAGGTCTTGAAAAGTGTGGGGA
CACGAGGGGACATTTGATGGGGATGCAAAACACGTGGGAAATAATCATGT
CGCACATGGTTTTTGAAGACTTGCACTTTATCGGATCACTGGAAGACGGT
TACGTTGAAGCTCGTTTGGCCTGGCGAAGCCAAGGCACAATAGTCCGCAC
CACTTGCTGTACGTGTCCAGGAAAAATTCGATCAGTTGTGGCTAGCGAGG
GCTGAGCTCTTTCACATGTGTCTGTCGTTCGCTTGTATCATGCTTGCATG
CCCCTTCGTCTTGTGTCCGTCCGCTTCGTTTCGGTTGCCTCGTCGCAGAG
ATGGCCGATCGTTCATGCGCTGCATCGACTCCGACCCCGACTTGATAGCG
GCCATGAAGAATGCGGCCGAGGCAGATCCCGTCTGCTCGAAGAACATGGC
TGCCGGGTAAGCGGGCACGAAAAAACGTCAAAAGAGAGAGCAGGCCACAC
ATTACTGCTGTCCTCGGCATCTTCCCTCGTCCCTCGTGCCCGCCTCCGAC
GGTCTGTGGGCAGGGCACATAGCAGCTCGTCCTGCTGTGTTTTGCACGCT
GTGGGTTGCTGTTCGTGCGACCATAGCAGAGTTCTGCTGCCCATTGGACG
GTGTGACTGTTTTGTAGACATGCTTTCTGTTCTGCGCATTCGGGCTGCTC
GCTGCTGCTTGTTTCCACCTTGTGGCCATGGCACAAAGCATTGACGTGCA
CTTCCCTCGTTTCTCATGCCGTTTTGTTGTTGTTGTTGTTGTGGATTTGG
GGGCTGTTCTTCTGCCTCCCTGCCAAGGAAATTGATTTTCGAGGCGTTGG
ACGTGGCCGGAGGCATGCCGGAGCTCACACAATCTTCTGCTGACTGCGTC
ATTGACGCTGGTCTACTGGACAAGCTTATCACAACGGAGGTACATGCTTG
GCCTTTTCAGCCCTCCTGGCGGCCCCTGCTTGCGTGTATATGTAGAAGGT
ATATGTGTCATCGGTCACTCAAAGGGGCACATTATGGGTACTTGGAAAAC
ATGACAAATTGCTTGCAATGGTACCTTCGGATTCATCTGTGAGGCGTGCT
TCATTCTTGGGTTGGCGTGGCGTCCCATGTGAAATGTGGTAGACTGCCAT
GGGAAGTAGATGGTGAGATGATGAAGTTCTTCAGTTGTCCTTGCTTTTTT
CTTTGTTTTGCCTTCCGGCAATCAATGGGCTGTGCTATTGTTGAAGTGCT
GTGGAACTCTGAACGATAAGCAGCGAACGCTCGTTTTTAGCAACGACCGG
CCGCCGTTTCTGTCACGTCGACACGCCCGTATTCCTCCTCGAACAGCATC
CTAGCTGCGCTGTAAACTGCTTCAGCTGTTGTCGAGCGTGTTCTTGTCGC
TCTGCTTTGATGGTGTGACGGTGTGACAGTGGGAGCGGGTCTGAGAGAGG
CGTCTTATTGGTCGCGTGACGCCCTCTGTGCTTGCTTGCTCTTTGAATTG
TACGGTAGATACCAGCTGCACGTTTGGTTGGCGTGTTTTTTGCATTGCTT
GCTTGTTTGATGGCAGGCCAGCCGCAACTGTTTTGCTCTGTAATAGTATT
TTTCTGTCTTTCGCATTTGTTTGCAGGGACTTGACGCCGCGAAGGCGTGC
TCCGACGCCGCCCACCGTGCCGTGCGCCTTGGAAACCCTTTGGTGGCGTT
GTCCATGATCAACAAGGACGACTTCGCCCAAATATTTGACGGAAACGTGC
GTTGCCGACCAGAACGGAACCAGCGGGGGGGGGGGGGGAGGATTGCCTCG
CCATGTTAGAGGAAACTCTTGTTGTACCTCGGCTGCCAATGATGCGTGCT
GTGCTTTGCAAAACTTGCTTGTGTTTTGGTCGGAGATCAGCCCTGAGTAG
TAGGCGGGTATTCAATATCATCCAAGGCCCCGCGGAGGCAGTAGACAACT
GGAAGCCGATACTTGAGATGCTCAACATATTCCAAGGCTCCACTGACACG
CTTCATTGCTCTTCAAGTTTTTTTGTTCTGCCCAACGTGTCGGACCGCCA
AAGCCGTCTCTGTTTGTGCTCAAGCCCCAGCTCCGACTGTCAACTATCCC
GCCTATCATCAATACGCTTGTTCCTGTGGCTCTGTCGTTACCCACCCGCA
GTGGGGGTGGATGCAAGAGCTGGATGGGGACCCCGGCGCGGTAAGCCAGT
GGTACCGGGACAAGAAGGTCAACCTCAAGGACGTGGGCAACAACTTCGTT
GAGCTGGGGATATCCTTCTTCGTGTACACCAACGTGGATAACTGCTGACG
GGTCCTTTAGAACGAAGGGGCGAACGTCGGGAGGAGCGGCACTTGTAAAC
AAGCCGTATGGTGTTTAAGGTGTTCAACGAGCATTCAAGTATCTGGGGGT
TAGAGTGCGTGTCGATAGAAGAAAATGCGCGAGCGCGATAAGCATTGATG
ATAGTAAGCGTGTTGGTCGAGGTGGGTTAGGGAATGTTCTGAAGGGCCTC
CTGGCGCGGATGGTCCTGGTGAGGCACGTCGAACTCGACACTCCTCGAAG
CCGAGGTACGGTGGACCGCCTGCTGGAGGATACAAATCCTTCACCGTTCA
CTCACTTTTGGAGCACTGGCTGTAAATACAGTTACCAGGTGCTATGCATC
TCGACCAGCATAGGAGTATACGATGGACGCTGGTCACAGCAGTTATTCGA
GATGAACCGCTCTATTTTCATGGCGGGTGGATGAGAAAACGAAAAACCCT
ATTCGTTCTGCGAAATGAGACCCATCTGTC
back to top

Coding sequence (CDS) from alignment at Scaffold_70:303776..308655-

>EsuBft1029_3a-0001 ID=EsuBft1029_3a-0001|Name=EsuBft1029_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=867bp|location=Sequence derived from alignment at Scaffold_70:303776..308655- (Ectocarpus subulatus male Bft15b)
ATGGGTCTCAATGGAACGAGACAATGCGTGGTGGCGATGGCTGCCTTGAG
CCTGGGCGGTGTTGGTGTGGATAGCTTCCTTGTGCCACAGCAGCGGTTCG
GCGGCAGCAGCTGTGCAAGATCATGTTTGAGAGTAGAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACGAGGC
TGGAAGAAGATCGTCGTCCTCCGTGACTAGGATGGCTGCTACCGCAGAGA
TCGGTTCCTTCCCGTACGAAGATGTGCTGCCGTTTCTCAAGGAGCACGTG
CAGCCTTCCGACCAGATGCTGCTGCTGGGGTGTGGGACAGAACTTCCTTT
GCAGCTCTCTCGGGATGGCTACGGCACTCGAGATGGCCGATCGTTCATGC
GCTGCATCGACTCCGACCCCGACTTGATAGCGGCCATGAAGAATGCGGCC
GAGGCAGATCCCGTCTGCTCGAAGAACATGGCTGCCGGGAAATTGATTTT
CGAGGCGTTGGACGTGGCCGGAGGCATGCCGGAGCTCACACAATCTTCTG
CTGACTGCGTCATTGACGCTGGTCTACTGGACAAGCTTATCACAACGGAG
GGACTTGACGCCGCGAAGGCGTGCTCCGACGCCGCCCACCGTGCCGTGCG
CCTTGGAAACCCTTTGGTGGCGTTGTCCATGATCAACAAGGACGACTTCG
CCCAAATATTTGACGGAAACTGGGGGTGGATGCAAGAGCTGGATGGGGAC
CCCGGCGCGGTAAGCCAGTGGTACCGGGACAAGAAGGTCAACCTCAAGGA
CGTGGGCAACAACTTCGTTGAGCTGGGGATATCCTTCTTCGTGTACACCA
ACGTGGATAACTGCTGA
back to top