EsuBft957_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft957_2a-0001 ID=EsuBft957_2a-0001|Name=EsuBft957_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1269bp|location=Sequence derived from alignment at Scaffold_68:226213..227767+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGTGGCCCACGTGCGTGCCACTCGACGACATCCCATCTC
TACTTGAGGTTGAGGAAGCGGTACGGGAAATGGCCAACAGAAAGGCCGTC
GGGCCGGACGACCTACCGGCTGAGCTGATCAAGCTTTTCCTGGACGGAGA
TCAAGTGCTGTTCAAGAAGGGGGACACGATGGAGTGCGGCAACTACCGGG
GCATCTCGCTCGTCGCACACGCCGGCAAGGTGCTGCTTAAGGTCGTCGCT
ACACGACTGAGCCACTACTGCGAGCGAGAGGGCATCCTCCCGGAGGAGGA
GAGCGGTTTCCGCCCACACCGGTCGACGCTCGACATGCTGTTCGCCATCC
AGCGGCTCCATGAGCTCGCGAGGAAGAAGAGTACTGCGGTGTTCGCGTGT
TTCGTCGACCTCACCAAGGCATACGATTCGGTGGACCGAGACCTACTGTG
GGACGTGCTCCGACGCTTCGGCGTGCCCCCGAAGATGCTGGCGGTCATTC
GCCACTTCCACGAGGGCATGAGGGCGCGCGTCCGAACGGACGACGGGCAG
TACTCGGAATGGTTCGACGTGGGCCAAGGCCTCCGACAGGGATGCAACCT
GGCCTCGCCACTGTTCAACTTGTTCTTGGCCGCGATGCTCATGGTCGCCG
TGGCCGATGCCTGATGCTGGTGCGTTACCCTTTGATTTTTTCTTTCGGCG
GGTGTGGGACGCGTCCTCCTTTATTTTTGTGTTTGTTTTATTTTGATCGG
TGTCCGAGGGATCTTTTCTCGAACGGTCGGTGCGATACCTGTTATTTTCT
TTCAATCATTTTGTTTTCTTGTTCCGAGTGGTTCGTACCCTATTTTTGTT
TTGTTTCTCCGCGGCGTCGTATGTGCAAGGTTTTGAGACCACGGGCTTCC
CATTTTTTGTGGACTATAGAGCTAATGTGAGAGACAACAACAACAACAAC
TCCGCACATATGCATACCAAATTGAAAATACGTTTGTAAACTGATGGAGA
TTGCATGTCCTAAAACTAACAGGGTGCGACACACAAAACGCCCGACTAAC
CAACAGCACCCAAAACTTTCGTCTGCACGTTCCCAACATAACATATATGA
GACACACAAGGCAGCTACCAAACTGATTTGTTGAGCCTGTTATCCGCAGG
GGACATGTCCCTATATGCT
back to top

protein sequence of EsuBft957_2a-0001

>EsuBft957_2 ID=EsuBft957_2|Name=EsuBft957_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=194bp
MANRKAVGPDDLPAELIKLFLDGDQVLFKKGDTMECGNYRGISLVAHAGK
VLLKVVATRLSHYCEREGILPEEESGFRPHRSTLDMLFAIQRLHELARKK
STAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRAR
VRTDDGQYSEWFDVGQGLRQGCNLASPLFNLFLAAMLMVAVADA
back to top

mRNA from alignment at Scaffold_68:226213..227767+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft957_2a-0001 ID=EsuBft957_2a-0001|Name=EsuBft957_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1555bp|location=Sequence derived from alignment at Scaffold_68:226213..227767+ (Ectocarpus subulatus male Bft15b)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNGGTGGCCCACGTGCGTGCCACTCGACGACATCCCATCTC TACTTGAGGTTGAGGAAGCGGTACGGGAAATGGCCAACAGAAAGGCCGTC GGGCCGGACGACCTACCGGCTGAGCTGATCAAGCTTTTCCTGGACGGAGA TCAAGGTCTCCTCCGCGAATTCCTCGCCACTGTCGTGGACGTGTGGCAGA CTGGCGACGTACCATAACAGTGGAACGATGCCACCATCAAAGTGCTGTTC AAGAAGGGGGACACGATGGAGTGCGGCAACTACCGGGGCATCTCGCTCGT CGCACACGCCGGCAAGGTGCTGCTTAAGGTCGTCGCTACACGACTGAGCC ACTACTGCGAGCGAGAGGGCATCCTCCCGGAGGAGGAGAGCGGTTTCCGC CCACACCGGTCGACGCTCGACATGCTGTTCGCCATCCAGCGGCTCCATGA GCTCGCGAGGAAGAAGAGTACTGCGGTGTTCGCGTGTTTCGTCGACCTCA CCAAGGCATACGATTCGGTGGACCGAGACCTACTGTGGGACGTGCTCCGA CGCTTCGGCGTGCCCCCGAAGATGCTGGCGGTCATTCGCCACTTCCACGA GGGCATGAGGGCGCGCGTCCGAACGGACGACGGGCAGTACTCGGAATGGT TCGACGTGGGCCAAGGCCTCCGACAGGGATGCAACCTGGCCTCGCCACTG TTCAACTTGTTCTTGGCCGCGATGCTCATGGTCGCCGTGGCCGAGTTCGA CAAGGACCCCAAACCTTCGGCCTCTGTGCTGTGTTTCTGTGTTTCTTTTT TTCATGACCTCCCTGCCTACTGTGATGTGTTGGGTACCGTGATCTCGCTT TGCTGTTGCCTTTGTTTTTGTACGTCTGGCTGTATGCCCATCTGCCGCCT CTTTGTCCGGTTTGCTCCGTTACTCCCATGCCCTGGTGCGTAGTGCCTGA TGCTGGTGCGTTACCCTTTGATTTTTTCTTTCGGCGGGTGTGGGACGCGT CCTCCTTTATTTTTGTGTTTGTTTTATTTTGATCGGTGTCCGAGGGATCT TTTCTCGAACGGTCGGTGCGATACCTGTTATTTTCTTTCAATCATTTTGT TTTCTTGTTCCGAGTGGTTCGTACCCTATTTTTGTTTTGTTTCTCCGCGG CGTCGTATGTGCAAGGTTTTGAGACCACGGGCTTCCCATTTTTTGTGGAC TATAGAGCTAATGTGAGAGACAACAACAACAACAACTCCGCACATATGCA TACCAAATTGAAAATACGTTTGTAAACTGATGGAGATTGCATGTCCTAAA ACTAACAGGGTGCGACACACAAAACGCCCGACTAACCAACAGCACCCAAA ACTTTCGTCTGCACGTTCCCAACATAACATATATGAGACACACAAGGCAG CTACCAAACTGATTTGTTGAGCCTGTTATCCGCAGGGGACATGTCCCTAT ATGCT
back to top

Coding sequence (CDS) from alignment at Scaffold_68:226213..227767+

>EsuBft957_2a-0001 ID=EsuBft957_2a-0001|Name=EsuBft957_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=585bp|location=Sequence derived from alignment at Scaffold_68:226213..227767+ (Ectocarpus subulatus male Bft15b)
ATGGCCAACAGAAAGGCCGTCGGGCCGGACGACCTACCGGCTGAGCTGAT
CAAGCTTTTCCTGGACGGAGATCAAGTGCTGTTCAAGAAGGGGGACACGA
TGGAGTGCGGCAACTACCGGGGCATCTCGCTCGTCGCACACGCCGGCAAG
GTGCTGCTTAAGGTCGTCGCTACACGACTGAGCCACTACTGCGAGCGAGA
GGGCATCCTCCCGGAGGAGGAGAGCGGTTTCCGCCCACACCGGTCGACGC
TCGACATGCTGTTCGCCATCCAGCGGCTCCATGAGCTCGCGAGGAAGAAG
AGTACTGCGGTGTTCGCGTGTTTCGTCGACCTCACCAAGGCATACGATTC
GGTGGACCGAGACCTACTGTGGGACGTGCTCCGACGCTTCGGCGTGCCCC
CGAAGATGCTGGCGGTCATTCGCCACTTCCACGAGGGCATGAGGGCGCGC
GTCCGAACGGACGACGGGCAGTACTCGGAATGGTTCGACGTGGGCCAAGG
CCTCCGACAGGGATGCAACCTGGCCTCGCCACTGTTCAACTTGTTCTTGG
CCGCGATGCTCATGGTCGCCGTGGCCGATGCCTGA
back to top