Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft1397_5 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 2 |
Length | 49 |
Date last modified | 2016-06-13 |
Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1397_5a-0001 ID=EsuBft1397_5a-0001|Name=EsuBft1397_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=492bp|location=Sequence derived from alignment at Scaffold_68:5..879- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGTTCGCCATCCAGCGGCTCCATGAGCTCGCGAGGAAGAAGAGTAC TGCGGTCTTCGCGTGCTTCGTCGATCTCACCAAGGCGTACGATTCGGTGG ACCGAGATCTGCTGTGGGACTGTCTCTTATACACATCTAGATNAGAGTAC ACGGGCAAGAAGGGCAGGTCAGCGGACCGCCCCCTGTCCTATGCCCAGGC CCTCATCCAGGTAGGCTGCGAGGAAACCATCGAGGCCACCGTGCGCAAAC GGAGACTTTGTTTCGCGGGCTTTGTTTTGCGCATGGAGGACAACTGCCTC CCCAAGCGCATGCTGTTAGGAGCGATGGCGGGGGGCGTGGGATACCGGGG CGGGCAGGAGAGCGACTGGGTGTCTCGTCTAGGAGAGGACCTCGTGGCCT TCAATATGGGAGACGAAACAGAAGGGGGGTAAATGGAAAGAGAGCGCCAA GGACCCCGAGGTGTGGTACAACAAGGTCGAGGACGGGGCGGC back to topprotein sequence of EsuBft1397_5a-0001 >EsuBft1397_5 ID=EsuBft1397_5|Name=EsuBft1397_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=143bp
MLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDCLLYTSRXEY TGKKGRSADRPLSYAQALIQVGCEETIEATVRKRRLCFAGFVLRMEDNCL PKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDETEGG back to topmRNA from alignment at Scaffold_68:5..879- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1397_5a-0001 ID=EsuBft1397_5a-0001|Name=EsuBft1397_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=875bp|location=Sequence derived from alignment at Scaffold_68:5..879- (Ectocarpus subulatus male Bft15b) ATGCTGTTCGCCATCCAGCGGCTCCATGAGCTCGCGAGGAAGAAGAGTAC
TGCGGTCTTCGCGTGCTTCGTCGATCTCACCAAGGCGTACGATTCGGTGG
ACCGAGATCTGCTGTGGGACTGTCTCTTATACACATCTAGATNAGAGTAC
ACGGGCAAGAAGGGCAGGTCAGCGGGTAAGAAGACGACGGTGGTGACGGA
CGCGGAGGCCCTGTGGGCCACGCTCTCCGCTGACGACGCGGCCTAGCCGG
AGAGTCTCGAGAAGATGATGTCGGTCATCGTGCGCGTGGCCGGCCTGTTC
GGACTGATGGTATCGGAGCTAAAGAAGGAAATCATGTGCATGATGCCGAA
AGGGATCGAGGAACGCCCGTTCACGGTCAGCGCCGCTGGCCAGACGTACA
AGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCTCACGCGGTGCATTGGCTGGAGCAAGCGGAA
ACGCTCAGACCGCCCCCTGTCCTATGCCCAGGCCCTCATCCAGGTAGGCT
GCGAGGAAACCATCGAGGCCACCGTGCGCAAACGGAGACTTTGTTTCGCG
GGCTTTGTTTTGCGCATGGAGGACAACTGCCTCCCCAAGCGCATGCTGTT
AGGAGCGATGGCGGGGGGCGTGGGATACCGGGGCGGGCAGGAGAGCGACT
GGGTGTCTCGTCTAGGAGAGGACCTCGTGGCCTTCAATATGGGAGACGAA
ACAGAAGGGGGGTAAATGGAAAGAGAGCGCCAAGGACCCCGAGGTGTGGT
ACAACAAGGTCGAGGACGGGGCGGC back to topCoding sequence (CDS) from alignment at Scaffold_68:5..879- >EsuBft1397_5a-0001 ID=EsuBft1397_5a-0001|Name=EsuBft1397_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=432bp|location=Sequence derived from alignment at Scaffold_68:5..879- (Ectocarpus subulatus male Bft15b) ATGCTGTTCGCCATCCAGCGGCTCCATGAGCTCGCGAGGAAGAAGAGTAC TGCGGTCTTCGCGTGCTTCGTCGATCTCACCAAGGCGTACGATTCGGTGG ACCGAGATCTGCTGTGGGACTGTCTCTTATACACATCTAGATNAGAGTAC ACGGGCAAGAAGGGCAGGTCAGCGGACCGCCCCCTGTCCTATGCCCAGGC CCTCATCCAGGTAGGCTGCGAGGAAACCATCGAGGCCACCGTGCGCAAAC GGAGACTTTGTTTCGCGGGCTTTGTTTTGCGCATGGAGGACAACTGCCTC CCCAAGCGCATGCTGTTAGGAGCGATGGCGGGGGGCGTGGGATACCGGGG CGGGCAGGAGAGCGACTGGGTGTCTCGTCTAGGAGAGGACCTCGTGGCCT TCAATATGGGAGACGAAACAGAAGGGGGGTAA back to top
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