Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 654926.Q8QNC1_ESV1K |
| ProteomeId | EsuBft2202_2 |
| Protein domains | Coil |
| Protein domains | IPR017905 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | probable fad-linked sulfhydryl oxidase r596 os:acanthamoeba polyphaga mimivirus gn:mimi [Automatic annotation] |
| Nb exon | 5 |
| Max annot lvl | 10239|Viruses |
| Length | 1458 |
| Hectar predicted targeting category | other localisation |
| Evalue | 5.86e-45 |
| EggNOG OGs | 4QB94@10239|Viruses,4QVJI@35237|dsDNA viruses no RNA stage |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Erv1 / Alr family |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0055114 |
| GO | 0016972 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2202_2a-0001 ID=EsuBft2202_2a-0001|Name=EsuBft2202_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1458bp|location=Sequence derived from alignment at Scaffold_581:8524..10238- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGTCGTCGTCAGTATCACCATCGTCCGCATCACTCGGCTCCAAGCT
GTCCAAGATCGAGGAGAACCAAGAAGATGATCTGAAGCGCATCAGGAAAA
ACGAGAGAAACATCCACAAGAACTACGACGACATCAAGGAGAACAACGAG
GACATCACCAAGGCCAACCTTCGGATCGAGCACCTCGAAACCACACTGGC
TTCGTACGAGGAGAGAATGGCGGCCCTCGAGACTTGCGTCGAGTCTCTCA
AGCACTCCGCTTCATCAGCACCGATATCCAATCTGTCGGCGCAGCTTCAG
ATGGATCGTTCGGCGCTGATCGCGTTCAGCGAGATGAACAAGGCTCTGCC
CGTGACCGAGAGGCACGTTTGGGAGAGGCCTCTCGAGAACGGGGACGGCA
GCGTCAGAATCCAGAAGATGGACAGGATCGTCGACATCAAGAGCCTGGAG
TACTTGCTCCGGACCAAAGCCACCCGGAATGTGGTGAACAATATCCTGGT
CAGCACGGGCGGACCGAAGCTCGAGATACCCCCGACCCTCCGGAGAAAGT
ACTGGGTGTTCATCAAAGACGGCGAGCTCACCACAATCAGCAAGGACTTC
AAGGGCGGCGTCGGGTACGAGTACTTGTGGACCGAGGACGCCGCGCTCAG
CCTACCGTCCACCGACTGGAAGCTTCCCGTGAGGCGCCAGACAGATCCGC
GCAGGGCCTACGTCGACCCTCGGACCAACGCTCTGTGGCTGCCGGAAGAG
GACCAGACGAGGCAGGCGGTGGAGGCGGCGGTGGACGTGGTGGACGCGGT
GGTGGAGGCCGCGGTTGAGGCGGCGGAGAGCGAAAGCAAAGGCGACGACG
ATGGCGACAACAACGGCAACGATCAACCGGAGGTCGAAAAACAAGCAGAA
AGAGGCAGTGCAGCTGTAGAAGAAGACGCAGCGGGGGAAGGTTCGCGGGG
AAACGGGGGTGCTGTCATCGGTCACAAGCGTTCGTTGCAGGATGTCGGAG
AAACGCCGTCGACTTCATCGTCGGAGTCAGAGTCGGAATCAGAGTCGGAA
TCAGAGTCGGAGTCGGAGTCGGAGTCGGACGACGGTGCACCCAAGAGGCC
GCGAACTTGGCTTGGAAGAAATATCAACAACATTTTCCTACACTGTGTCG
CCGCTGGTTTCCCCGTTGATCCGGACGAATACGATGACATTCGCGGCAAT
ATGAGAGGGAAGATAAATAAACACTACATGTCTTTCTTCAAGAACGCGGG
ACATGTTTTGCCGTGCCGGTTCTGCAGAGAGTCGTACCTTTTGTTTGGGT
GGCTCGCCATCATACACAACAAAGTCAACAAGAAGAATGGTGCCAAACAA
GAAACCAGTCTTCAGGCCGTCGTGGACAAGTACGAGAAGTTCAGAGCTTC
GTGTCAGAATCGGAAAGCTTTGGGGTGCACCGAGCCCGCGAAGAAAACGC
GAAGATGA back to topprotein sequence of EsuBft2202_2a-0001 >EsuBft2202_2 ID=EsuBft2202_2|Name=EsuBft2202_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=485bp
MSSSSVSPSSASLGSKLSKIEENQEDDLKRIRKNERNIHKNYDDIKENNE
DITKANLRIEHLETTLASYEERMAALETCVESLKHSASSAPISNLSAQLQ
MDRSALIAFSEMNKALPVTERHVWERPLENGDGSVRIQKMDRIVDIKSLE
YLLRTKATRNVVNNILVSTGGPKLEIPPTLRRKYWVFIKDGELTTISKDF
KGGVGYEYLWTEDAALSLPSTDWKLPVRRQTDPRRAYVDPRTNALWLPEE
DQTRQAVEAAVDVVDAVVEAAVEAAESESKGDDDGDNNGNDQPEVEKQAE
RGSAAVEEDAAGEGSRGNGGAVIGHKRSLQDVGETPSTSSSESESESESE
SESESESESDDGAPKRPRTWLGRNINNIFLHCVAAGFPVDPDEYDDIRGN
MRGKINKHYMSFFKNAGHVLPCRFCRESYLLFGWLAIIHNKVNKKNGAKQ
ETSLQAVVDKYEKFRASCQNRKALGCTEPAKKTRR back to topmRNA from alignment at Scaffold_581:8524..10238- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2202_2a-0001 ID=EsuBft2202_2a-0001|Name=EsuBft2202_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1715bp|location=Sequence derived from alignment at Scaffold_581:8524..10238- (Ectocarpus subulatus male Bft15b)
ATGTCGTCGTCGTCAGTATCACCATCGTCCGCATCACTCGGCTCCAAGCT
GTCCAAGATCGAGGAGAACCAAGAAGATGATCTGAAGCGCATCAGGAAAA
ACGAGAGAAACATCCACAAGAACTACGACGACATCAAGGAGAACAACGAG
GACATCACCAAGGCCAACCTTCGGATCGAGCACCTCGAAACCACACTGGC
TTCGTACGAGGAGAGAATGGCGGCCCTCGAGACTTGCGTCGAGTCTCTCA
AGCACTCCGCTTCATCAGCACCGATATCCAAGTCAAATTCGAAGCTCAAG
ACGAAGCCGACACCCAGTGCCAGCTCCGAACCACCGGCGCCCCAACCGAA
GAAGAATAAGTCTGTCGGCGCAGCTTCAGATGGATCGTTCGGCGCTGATC
GCGTTCAGCGAGATGAACAAGGCTCTGCCCGTGACCGAGAGGCACGTTTG
GGAGAGGCCTCTCGAGAACGGGGACGGCAGCGTCAGAATCCAGAAGATGG
ACAGGATCGTCGACATCAAGAGCCTGGAGTACTTGCTCCGGACCAAAGCC
ACCCGGAATGTGGTGAACAATATCCTGGTCAGCACGGGCGGACCGAAGCT
CGAGATACCCCCGACCCTCCGGAGAAAGTACTGGGTGTTCATCAAAGACG
GCGAGCTCACCACAATCAGCAAGGACTTCAAGGGCGGCGTCGGGTACGAG
TACTTGTGGACCGAGGACGCCGCGCTCAGCCTACCGTCCACCGACTGGAA
GCTTCCCGTGAGGCGCCAGACAGATCCGCGCAGGGCCTACGTCGACCCTC
GGACCAACGCTCTGTGGCTGCCGGAAGAGGACCAGTAGCTTTAGTTTCTT
CTACCCCTCCTCCTCCTCCTCCTCCAGGAGGAGGAGGTGGTGGTGGTGGA
GGAGGAGGCGGAGAGGACGAGGCAGGCGGTGGAGGCGGCGGTGGACGTGG
TGGACGCGGTGGTGGAGGCCGCGGTTGAGGCGGCGGAGAGCGAAAGCAAA
GGCGACGACGATGGCGACAACAACGGCAACGATCAACCGGAGGTCGAAAA
ACAAGCAGAAAGAGGCAGTGCAGCTGTAGAAGAAGACGCAGCGGGGGAAG
GTTCGCGGGGAAACGGGGGTGCTGTCATCGGTCACAAGCGTTCGTTGCAG
GATGTCGGAGAAACGCCGTCGACTTCATCGTCGGAGTCAGAGTCGGAATC
AGAGTCGGAATCAGAGTCGGAGTCGGAGTCGGAGTCGGACGACGGTGCAC
CCAAGAGGCCGCGAGTGATGTAGTTCTCGGGGCGGTTTAGTTGTGTTTGT
TGCAATGCAGACTTGGCTTGGAAGAAATATCAACAACATTTTCCTACACT
GTGTCGCCGCTGGTTTCCCCGTTGATCCGGACGAATACGATGACATTCGC
GGCAATATGAGAGGGAAGATAAATAAACACTACATGTCTTTCTTCAAGAA
CGCGGGACATGTTTTGCCGTGCCGGTTCTGCAGAGAGTCGTACCTTGTAT
TCTTGTCCGAAACTCCAGTTGAGAAACACATTCACTCGCGATAAAAGTTG
TTTGGGTGGCTCGCCATCATACACAACAAAGTCAACAAGAAGAATGGTGC
CAAACAAGAAACCAGTCTTCAGGCCGTCGTGGACAAGTACGAGAAGTTCA
GAGCTTCGTGTCAGAATCGGAAAGCTTTGGGGTGCACCGAGCCCGCGAAG
AAAACGCGAAGATGA back to topCoding sequence (CDS) from alignment at Scaffold_581:8524..10238- >EsuBft2202_2a-0001 ID=EsuBft2202_2a-0001|Name=EsuBft2202_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1458bp|location=Sequence derived from alignment at Scaffold_581:8524..10238- (Ectocarpus subulatus male Bft15b)
ATGTCGTCGTCGTCAGTATCACCATCGTCCGCATCACTCGGCTCCAAGCT
GTCCAAGATCGAGGAGAACCAAGAAGATGATCTGAAGCGCATCAGGAAAA
ACGAGAGAAACATCCACAAGAACTACGACGACATCAAGGAGAACAACGAG
GACATCACCAAGGCCAACCTTCGGATCGAGCACCTCGAAACCACACTGGC
TTCGTACGAGGAGAGAATGGCGGCCCTCGAGACTTGCGTCGAGTCTCTCA
AGCACTCCGCTTCATCAGCACCGATATCCAATCTGTCGGCGCAGCTTCAG
ATGGATCGTTCGGCGCTGATCGCGTTCAGCGAGATGAACAAGGCTCTGCC
CGTGACCGAGAGGCACGTTTGGGAGAGGCCTCTCGAGAACGGGGACGGCA
GCGTCAGAATCCAGAAGATGGACAGGATCGTCGACATCAAGAGCCTGGAG
TACTTGCTCCGGACCAAAGCCACCCGGAATGTGGTGAACAATATCCTGGT
CAGCACGGGCGGACCGAAGCTCGAGATACCCCCGACCCTCCGGAGAAAGT
ACTGGGTGTTCATCAAAGACGGCGAGCTCACCACAATCAGCAAGGACTTC
AAGGGCGGCGTCGGGTACGAGTACTTGTGGACCGAGGACGCCGCGCTCAG
CCTACCGTCCACCGACTGGAAGCTTCCCGTGAGGCGCCAGACAGATCCGC
GCAGGGCCTACGTCGACCCTCGGACCAACGCTCTGTGGCTGCCGGAAGAG
GACCAGACGAGGCAGGCGGTGGAGGCGGCGGTGGACGTGGTGGACGCGGT
GGTGGAGGCCGCGGTTGAGGCGGCGGAGAGCGAAAGCAAAGGCGACGACG
ATGGCGACAACAACGGCAACGATCAACCGGAGGTCGAAAAACAAGCAGAA
AGAGGCAGTGCAGCTGTAGAAGAAGACGCAGCGGGGGAAGGTTCGCGGGG
AAACGGGGGTGCTGTCATCGGTCACAAGCGTTCGTTGCAGGATGTCGGAG
AAACGCCGTCGACTTCATCGTCGGAGTCAGAGTCGGAATCAGAGTCGGAA
TCAGAGTCGGAGTCGGAGTCGGAGTCGGACGACGGTGCACCCAAGAGGCC
GCGAACTTGGCTTGGAAGAAATATCAACAACATTTTCCTACACTGTGTCG
CCGCTGGTTTCCCCGTTGATCCGGACGAATACGATGACATTCGCGGCAAT
ATGAGAGGGAAGATAAATAAACACTACATGTCTTTCTTCAAGAACGCGGG
ACATGTTTTGCCGTGCCGGTTCTGCAGAGAGTCGTACCTTTTGTTTGGGT
GGCTCGCCATCATACACAACAAAGTCAACAAGAAGAATGGTGCCAAACAA
GAAACCAGTCTTCAGGCCGTCGTGGACAAGTACGAGAAGTTCAGAGCTTC
GTGTCAGAATCGGAAAGCTTTGGGGTGCACCGAGCCCGCGAAGAAAACGC
GAAGATGA back to top
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