Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft4711_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 76 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-12_003030.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4711_2a-0001 ID=EsuBft4711_2a-0001|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=768bp|location=Sequence derived from alignment at Scaffold_548:295569..297907- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGTCGGCAGCAGCGATCTTGTACGTCTGCGGCTGGGATTCGACGCG
CCATGCGGGGGAAAAGAAAGTTGCCGTCGATGCTACGGCCAGCAACAGCC
AGAGTGTGGGTGACGCACAGTGGGCGGCCGTTGTAGAGGGGCGAGACGAG
CCCGGCGGTGGTGATCACCCGTGGGCGGGAAAGGGGCCGGAAGGAAGCTT
TCACGAAGGGCTTGGACAGGAAACACGACAGACACCACCAGGCGGGGGTG
GTGGCCACGCAGAAAATCGGCCGCGTGGAAGAGAGGGCCGAGCCGCGGGT
GATGCGACCCCCTCATCGTTCTTGAGCGAGGGCGCCGTGAAGGCGGTCGT
CGGCACGGTGGAGAGCTACGCCGACTTCGCCAGGGGAACTCTGGAGGCAG
ACGAGCTGGCCGTACAACAAGGGCGCCCGCTGCAGGGAAAGTATATCGTG
CTGGATTCGGGAAACGAGCTCGTCAATCGCCTGCGCGGGGTGATGAGCGG
CTTCTTTCTGGGCATGTTGACGGATAGGGTGTTCGTGGCCGACATCACGT
ACCAGAAGGACGGCACACAAGGGCTGCTGAGTGCTCTGTTTGAGGGGCCG
GGATACGAGGTGCGGAAAGCGACGGCTTTTTTTATTCTTGTCCCGTCGTT
TTTACCAGTCATAACCCACGTTCACTGCTCGCCGTGGCACCGCTTTTTCC
TGCTGGGCTACGTAGTCCCGATTTCGATTGCACATGGTGTAGAAATGACT
GGTACTTGCTCGGTTTAG back to topprotein sequence of EsuBft4711_2a-0001 >EsuBft4711_2 ID=EsuBft4711_2|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=255bp
MASAAAILYVCGWDSTRHAGEKKVAVDATASNSQSVGDAQWAAVVEGRDE
PGGGDHPWAGKGPEGSFHEGLGQETRQTPPGGGGGHAENRPRGREGRAAG
DATPSSFLSEGAVKAVVGTVESYADFARGTLEADELAVQQGRPLQGKYIV
LDSGNELVNRLRGVMSGFFLGMLTDRVFVADITYQKDGTQGLLSALFEGP
GYEVRKATAFFILVPSFLPVITHVHCSPWHRFFLLGYVVPISIAHGVEMT
GTCSV back to topmRNA from alignment at Scaffold_548:295569..297907- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4711_2a-0001 ID=EsuBft4711_2a-0001|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2339bp|location=Sequence derived from alignment at Scaffold_548:295569..297907- (Ectocarpus subulatus male Bft15b)
ATGGCGTCGGCAGCAGCGATCTTGTACGTCTGCGGCTGGGATTCGACGCG
CCATGCGGGGGAAAAGAAAGTTGCCGTCGATGCTACGGCCAGCAACAGCC
AGAGTGTGGGTGACGCACAGTGGGCGGCCGTTGTAGAGGGGCGAGACGAG
CCCGGCGGTGGTGATCACCCGTGGGCGGGAAAGGGGCCGGAAGGAAGCTT
TCACGAAGGGCTTGGACAGGTATGGGAAGGGTAGCGTGTCCGTGGTGTTA
TGCAGGGCTGATAGGTTATGTAGAGAGAGACTACTGTAGTGCTCAAGTGG
TGGATTGTGAAAGCACATCCTAGCGTGTTGCCTTGGTAGCAGCGGCGTTA
TGCTCGTGGTATTGTGATGTTGCGCCAGTTGTTTTGTTCGTTTTGATGGG
GCTGGAGGCTGCATGTAACATACGACCAGTGCTTATTTCCGCCGGCTCCT
GCTGGAGTGATCCGATCAAAGCCTTCCACCGTAGATCCTAGTGTCGCTAC
ACGTCAGCCAGAAAAATTCAATCTCTGCACCAACCGGACCAGCACCTTCC
AAGCCGTTAGACAAGACGCGACGGCACACCCGATCTGCTGTCGGACTGCT
GCCAGGTCAAAATCAACCAAGTACAGTATCACAACAAAACCTCGGCGATT
AAACCCGAGCCTCGAACCTGCTGTGCTACGTGGCATGACCAGATATCCTG
CCTCTTCCCTCCTTGTCCGCTGCTGATCAAAAACACCGCGCCGACTGCGC
TCCGAATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAACCATAATGGTGGCCGAGT
AGATCATGTTGTGCGGGGTGGAGAATCCTCGCTCCGCGCAAGGGGGATGA
TCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACACG
GTGCTTACAACTGTCTCTGGAAGTGAAGCATCCAGAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCCCCCCCCCACGATGGGAACATAGGAAACA
CGACAGACACCACCAGGCGGGGGTGGTGGCCACGCAGAAAATCGGCCGCG
TGGAAGAGAGGGCCGAGCCGCGGGTGATGCGACCCCCTCATCGTTCTTGA
GCGAGGGCGCCGTGAAGGCGGTCGTCGGCACGGTGGAGAGCTACGCCGAC
TTCGCCAGGGGAACTCTGGAGGCAGACGAGCTGGCCGTACAACAAGGGCG
CCCGCTGCAGGTGTACAAGTAGACGGCAGCAAAAAATGGCGGTGTGCCGT
AGGCTTGAAGAGCTATTGCTTGGATGGTGGGGCCCCGTTCAGCTTGCGTT
TGGCTTGTCATTGACCACTGGTTGTTGGCCTGGTGTGGGGCACGAGCTAC
GATTTTTCACAGCCGAGGAAGTGTTTCCGTGTGGTTGTCGTAAGCGGAGA
GAGCGCAAGGTTCGGGCCGGGGGGCATTGCGACGTCAAGCTTCACCAGAA
TATGCTCCCCCGCCGCCGCCGCCGCGTCAAGACGAAAGCACGCCGCACAT
TTTGGTGGCTGTTCTTATGACTCTATCGGGAATAGGGAACGAGGGTTCCG
CAAGTCAAGAAACAAGATGCGAGGCCCGGCGGCCTATCGCCTCGAGGAAA
CCAATGAGTGAGCTCCTCCACTACCCGCATTCCCCGCTTTGGTCGACTAT
TGCCACAACTACCACCTCCACCACCATCACCATAGTTATCATCAGCACCA
GATGTTAGCGATGTCTCCTGCGAAGGTTGTTCGGTTTGGAAAGGGGCGCG
TAGTGACTGGTCGGATCGCTGTGAGTCCAGCCACAATATCATCGCAACCC
CGATCGACCGACGGTGAGACTTCACGGCTCACCCCTTCCCTTGCTTTCCT
CGACAGGGAAAGTATATCGTGCTGGATTCGGGAAACGAGCTCGTCAATCG
CCTGCGCGGGGTGATGAGCGGCTTCTTTCTGGGCATGTTGACGGATAGGG
TGTTCGTGGCCGACATCACGTACCAGAAGGACGGCACACAAGGGCTGCTG
AGTGCTCTGTTTGAGGGGCCGGGATACGAGGTGCGGAAAGCGACGGCTTT
TTTTATTCTTGTCCCGTCGTTTTTACCAGTCATAACCCACGTTCACTGCT
CGCCGTGGCACCGCTTTTTCCTGCTGGGCTACGTAGTCCCGATTTCGATT
GCACATGGTGTAGAAATGACTGGTACTTGCTCGGTTTAG back to topCoding sequence (CDS) from alignment at Scaffold_548:295569..297907- >EsuBft4711_2a-0001 ID=EsuBft4711_2a-0001|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=768bp|location=Sequence derived from alignment at Scaffold_548:295569..297907- (Ectocarpus subulatus male Bft15b)
ATGGCGTCGGCAGCAGCGATCTTGTACGTCTGCGGCTGGGATTCGACGCG
CCATGCGGGGGAAAAGAAAGTTGCCGTCGATGCTACGGCCAGCAACAGCC
AGAGTGTGGGTGACGCACAGTGGGCGGCCGTTGTAGAGGGGCGAGACGAG
CCCGGCGGTGGTGATCACCCGTGGGCGGGAAAGGGGCCGGAAGGAAGCTT
TCACGAAGGGCTTGGACAGGAAACACGACAGACACCACCAGGCGGGGGTG
GTGGCCACGCAGAAAATCGGCCGCGTGGAAGAGAGGGCCGAGCCGCGGGT
GATGCGACCCCCTCATCGTTCTTGAGCGAGGGCGCCGTGAAGGCGGTCGT
CGGCACGGTGGAGAGCTACGCCGACTTCGCCAGGGGAACTCTGGAGGCAG
ACGAGCTGGCCGTACAACAAGGGCGCCCGCTGCAGGGAAAGTATATCGTG
CTGGATTCGGGAAACGAGCTCGTCAATCGCCTGCGCGGGGTGATGAGCGG
CTTCTTTCTGGGCATGTTGACGGATAGGGTGTTCGTGGCCGACATCACGT
ACCAGAAGGACGGCACACAAGGGCTGCTGAGTGCTCTGTTTGAGGGGCCG
GGATACGAGGTGCGGAAAGCGACGGCTTTTTTTATTCTTGTCCCGTCGTT
TTTACCAGTCATAACCCACGTTCACTGCTCGCCGTGGCACCGCTTTTTCC
TGCTGGGCTACGTAGTCCCGATTTCGATTGCACATGGTGTAGAAATGACT
GGTACTTGCTCGGTTTAG back to top
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