EsuBft1015_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1015_2a-0001 ID=EsuBft1015_2a-0001|Name=EsuBft1015_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1231bp|location=Sequence derived from alignment at Scaffold_544:344570..348127- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GCTGTTTGTTTGAAACCGGAGTTGTGCGCTCGCTGTGGTACAAACTATTC
TATCATGGTGACAATGGACGAGCGAGCACCCTCTTTCTTTGAGAAGTTGG
CGGTGAAGGGGAAAAAGGAGCCTCTGGTGCCGATCGGGGCCTTAGCGACA
GTGGGATTCTTGGTGTCAGGAATCTACTCTTTCAAGCAGGGCAACAAGCA
GCTTTCGCAGAAGCTTATGAGGGGCCGGGTGGTCGCACAGGGATTTACGA
TTCTGGTAATGACGGCGGGGTTCTTCATGGCGGGGCCACCGGAGATGACC
AGGCAGACGGTGGAGGGAAAAATGGACGCTATAAGCAAGCAGACCAACCG
GTGGTCTGGGGTACCGCCCCCAACCGCCCAGGCCAAAGCGGTAGCAATAG
AGGACGGCCGACAGTGAATCTGTTCGTAGCGCGTTTTGACCGTAGTCCCG
GTACCGGCAGATATTGTTCATGTGGTAGGATAAGGGCGGGGACGTGGCTC
AGGATGCCTTTGTACCTCAGACATGATGAACGTTGGCTTTTTTTTTGTGA
CTGCACACCGGGGCATTGTTTCTTCTTTTCCCTGGCGTCGTTTGTTTTTG
ACAACGGACGCGCGTTTAGGCGGCGCTGTGACTGAGGAAACCCCGTACTA
CCGGTGCAGGCGAATCTTGTTCAACGGTAGGTTTTAGATAGCGGCGGCGA
CATTGCTCAGGATGTCCTTTTACCTCAGGCATGGTGGACATTGAGTACTA
TTTTTCTTGTGGCACACCGGGCTATTGCTTCTTCCTTCACGCGACTTGTT
TTGGACAACGGATGGACGTTTTGGTGGCATCTCGTCTCGTTGTAACCGCG
CAGCGGCACCTGTGTGTGTTTGTGTGCATTTTTTTTTGCTTCGCTGGCGA
GTGGACCCTCACATCCTTCATGCATGCAGGTGCCAAAGCTGTGCGATGTT
GAATAGTTTTTCTAATATAATGGGGGCACGTGGTGCGTCATGTATATTTT
TGAGGCTTTCGAATCATGGTCTGTGAGGCCAGATCGGTAGATTATTTTTT
TCTTCCGAAGATACATGTCGGGTTCCGATTTTCAACAACACGAAATAGCA
GTTGAAAGAAAACGTTTAGTCTAATTCTCAAGTAACTTTATTGGTAAAAA
ATACCCCAGTTTCGTGTAACCTTCCTCCCGATGATTTGTGCTGGGTAAGT
GACACAACAGGGTAGTATACCATACATACCT
back to top

protein sequence of EsuBft1015_2a-0001

>EsuBft1015_2 ID=EsuBft1015_2|Name=EsuBft1015_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=120bp
MVTMDERAPSFFEKLAVKGKKEPLVPIGALATVGFLVSGIYSFKQGNKQL
SQKLMRGRVVAQGFTILVMTAGFFMAGPPEMTRQTVEGKMDAISKQTNRW
SGVPPPTAQAKAVAIEDGRQ
back to top

mRNA from alignment at Scaffold_544:344570..348127-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1015_2a-0001 ID=EsuBft1015_2a-0001|Name=EsuBft1015_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3558bp|location=Sequence derived from alignment at Scaffold_544:344570..348127- (Ectocarpus subulatus male Bft15b)
GCTGTTTGTTTGAAACCGGAGTTGTGCGCTCGCTGTGGTACAAACTATTC TATCATGGTGACAATGGACGAGCGAGCACCCTCTTTCTTTGAGAAGTTGG CGGTGAAGGGGAAAAAGGAGCCTCTGGTGCCGATCGGGGCCTTAGCGACA GTGGGATTCTTGGTGTCAGGTATGGCAATCAGTGTTTTCCAAAAGCAGCA TGCTTCGCCCCCAACACAGCAAAGCGTCAGCAGAGATGTAGCACACGTCG AGACACATTTGTCAGTTACCTTCAATAGTGAAGGCACGGGGAAGGAGAGG TTGTAAGTTCCCTGTATTCCTAGCATTAAGGTATCTACACACGGCTGGTA CACTCCGCTGCCCGGCGTTCCAACCGGCCCCTTGACTCGTACCTTACCAG CGGAAGAGGAGGTTCTGTTGCTATATTGCTAATACTCTGGCTGTCGAACT CTCGTTGAAGGCGGACTCTGGCCTGAGGTTGCCGCCCGTTCTTGTTTTTT TCTAATCGCCAACATATCGGAGTTCGACGAGGCACCCGTTTTTGGTCTCT GCGCTGCCAGCAGCCGGTCAAACAGAACACGAGCAGCCGCCAGCAGCAGC AGCCAGCACAACCCTTGAGGGCTCAGTAGCACACGCTTTGCGAACTACCG CCCGTCGTGCAAACCATAACTATCGCGTAAAAAGTGAACCTTAGCAGGAT GGGCCTGTGTTCTGGTAGAGCACAGCCGTATTCGTGAAACAGCGAAATGA TGCTGCGGTGGTAGACTACAGAAGTACGATAGTTGATACTGCGATGTCCC CTGCCTGAATATTACAAAAGAAGTAGAACTACAAACATGCAACGTCACCG TCAGGTCCCCATAGCTGACGCGCTTCTCCCCTTAGCATGGCCAAATCATT CGTTTTTTCTGGAAGTCTAGGCTTTTCTGAGTTAAGGCGAAAGAACAGAT GCTCGCGGAGGGACTTCGATCGTATCTACGCTGTAGTCTGCGCAGGTTTA GCTGAGTAATACAGAATCGGAAAAGTTGGGGTTAGGGCTATAGGTAAAGG GTGCATACGATTTCATTACTTCCCCAAGGGGCAATCGCTCCTCGTGCGAT TGTGGATACCCTGTGGATCGCATTGTTCGTGGTTTGGTGCAGCATTTAGA TACATCTTGACGTTAGGAGTAAAGCTTCTGACCACCTCGCCGCATGGGAT TGTGGTTCCCTGCCACTCCCCATTTGACCTTGGTTGTGTGTGTTTTGTGG TCATCTTGTGCCTTGATGCTTGCCTTGTTTTCTTGTAGGGGTACAGTCAT CTCTCGGTTAAGGGCACCATTTTTAAGGACACTCCCCTGTCAAGGACAAC CTTTTTTTCACAGGCATGGTGGCCCGCAGAATGTAGATAGAACATAAGGA GGGATATCAACCTGGAGGACACTTTCCCCGGCTTTAGAACAGATTTACCT GTTTCAACGAAGAACCATGTATGTCCTTAACGGAGAGGGTTGTTAGCTAC GACATATGCATATAGCTGGCCAATGAGAATCGTCAGTTCTAGAGTAAGTA GCACACAGCGTCCGTGGCAGAGGGGGCCCAGTGTAGCGCAAAGGAAAGCA TCGCCACGCCGGTTGTGCCTCCTGTTTCTGGCGAGGCGATGGTCGAATAT CCCTGCAATTGGTGGCTCGTGTGGTCACTTTCTCTCGTGCCCATCCATTG CGTACTCCGTATATCTCCGTCACCTTTGTCTCCCGTGATATGTGTGGCAT GCGTCTCCCCTCCTGTTTTTCCAACGATATTTTTCTGTTCCGGTTGTGGC CGTCGTTGAACTCGGTTCATCAGATAAAAAGGCTGAGTAATTTGTCTCTT CTTTTTTTTGCCTGCTACATTGAACCGACGCAAGCATCCCGCGTGTGTAC TGCTCCATGCTGTCGGGTCGCAGGAATCTACTCTTTCAAGCAGGGCAACA AGCAGCTTTCGCAGAAGCTTATGAGGGGCCGGGTGGTCGCACAGGGATTT ACGATTCTGGTAATGACGGCGGGGTTCTTCATGGCGGGGCCACCGGAGGT ACGCAACAGGAATCGACTTTTTCTGTCACTCTTGTGGGTACCTCTTGGCT GTCTCTCTCTGGGTTTTATGAAATTCTTCATGGCCGGGCGCCCACGCGCG TGATGCGAGGGCAAGTCGACTTGACTGCCAAGTTAAGCAGGGTTTGCCAA CACAGGCGTTGGCTGTCGTGTTCCCATGTGTACAAGTCGTGCGACCCGAA ACAGGTAGCAGCCACGCACTCCATGCTACCGATAAATTGGATGTCGGGAG TCACCTATCAGGTTTTTGTTTTGTGTTGTTTGGTGATCCTGTGTGCCAAT TTGTTGACCATGTTGCCATCCGAACGGCTTCCCTCCTCCTTCCACCTTGG TGTGCGTGTTGCGCTGTCCCTTCACCCAAAACATGATGTGGAGATACACC ATGTCTCGGATGTTGTCCGTCAGAGTACCCCAGCAATCCTGGTGAGGGTA GGTGTTCTCCTTCTCGACTGCGATGCATTGAAGTGACAAGGTGGCGTCAA GCACCACGCAAGTAACCCCCTCCCCCCCTCCCCTCCCGCTTCGCTGACCG GACGGTTTGTTGACTCGAAAGATGACCAGGCAGACGGTGGAGGGAAAAAT GGACGCTATAAGCAAGCAGACCAACCGGTGGTCTGGGGTACCGCCCCCAA CCGCCCAGGCCAAAGCGGTAGCAATAGAGGACGGCCGACAGTGAATCTGT TCGTAGCGCGTTTTGACCGTAGTCCCGGTACCGGCAGATATTGTTCATGT GGTAGGATAAGGGCGGGGACGTGGCTCAGGATGCCTTTGTACCTCAGACA TGATGAACGTTGGCTTTTTTTTTGTGACTGCACACCGGGGCATTGTTTCT TCTTTTCCCTGGCGTCGTTTGTTTTTGACAACGGACGCGCGTTTAGGCGG CGCTGTGACTGAGGAAACCCCGTACTACCGGTGCAGGCGAATCTTGTTCA ACGGTAGGTTTTAGATAGCGGCGGCGACATTGCTCAGGATGTCCTTTTAC CTCAGGCATGGTGGACATTGAGTACTATTTTTCTTGTGGCACACCGGGCT ATTGCTTCTTCCTTCACGCGACTTGTTTTGGACAACGGATGGACGTTTTG GTGGCATCTCGTCTCGTTGTAACCGCGCAGCGGCACCTGTGTGTGTTTGT GTGCATTTTTTTTTGCTTCGCTGGCGAGTGGACCCTCACATCCTTCATGC ATGCAGGTGCCAAAGCTGTGCGATGTTGAATAGTTTTTCTAATATAATGG GGGCACGTGGTGCGTCATGTATATTTTTGAGGCTTTCGAATCATGGTCTG TGAGGCCAGATCGGTAGATTATTTTTTTCTTCCGAAGATACATGTCGGGT TCCGATTTTCAACAACACGAAATAGCAGTTGAAAGAAAACGTTTAGTCTA ATTCTCAAGTAACTTTATTGGTAAAAAATACCCCAGTTTCGTGTAACCTT CCTCCCGATGATTTGTGCTGGGTAAGTGACACAACAGGGTAGTATACCAT ACATACCT
back to top

Coding sequence (CDS) from alignment at Scaffold_544:344570..348127-

>EsuBft1015_2a-0001 ID=EsuBft1015_2a-0001|Name=EsuBft1015_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=363bp|location=Sequence derived from alignment at Scaffold_544:344570..348127- (Ectocarpus subulatus male Bft15b)
ATGGTGACAATGGACGAGCGAGCACCCTCTTTCTTTGAGAAGTTGGCGGT
GAAGGGGAAAAAGGAGCCTCTGGTGCCGATCGGGGCCTTAGCGACAGTGG
GATTCTTGGTGTCAGGAATCTACTCTTTCAAGCAGGGCAACAAGCAGCTT
TCGCAGAAGCTTATGAGGGGCCGGGTGGTCGCACAGGGATTTACGATTCT
GGTAATGACGGCGGGGTTCTTCATGGCGGGGCCACCGGAGATGACCAGGC
AGACGGTGGAGGGAAAAATGGACGCTATAAGCAAGCAGACCAACCGGTGG
TCTGGGGTACCGCCCCCAACCGCCCAGGCCAAAGCGGTAGCAATAGAGGA
CGGCCGACAGTGA
back to top