EsuBft5543_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft5543_2a-0001 ID=EsuBft5543_2a-0001|Name=EsuBft5543_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1143bp|location=Sequence derived from alignment at Scaffold_544:189723..191499- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CGTGTCAGTTGCTAATCCCAAAATCTAGCAAAGACTCGGTCCGTGGTCAC
AAAAATGCTAGAGCCATCAGATGATCTAAAGAACACACACACTATTAGCA
ATAAATGGGTACGCAAGCCCGAGGAGGTACACCTGCAGTCCCTGCAGCAC
GTTTGCATGCTCACAACTGAACTACACGCCCACACACTACAAATCGACTA
CAGCAGCAGCATCACCCCCCTTGTCCCGCATTTAACCAAAATGAATATAG
TAGGCGGGTGGTGTCCCAAGGTGCAACTCACCGCCGCGCTGGCTCAGCGT
GGCAGTGAGGAAGCACAGACGGTGGCAGTGGCGAGAGGCAAGAACCGAGC
TCTGCAGAGATGGATTGATGCGAGGAAATTCGCCGCTCGGAAAATACGGA
AGAAAGCACACCCGCAACGCGAGGTGGACCGAGAGAGACACGAGACCGCA
GCGGCCGTCAAGGCGGCTGCGAAGAAGAAGGCACGAGAGGGCGACCTATC
GTTCGGCACGTTCAACGTACGCACGCTCGCCTACAGCGGTAGGAACCCCA
TCGGTCACAACGTGATGACGGTCATGCAGATTTGTTCCGCGACCGGCTGT
GATGTGATAGGACTTCAGGAGACCCGACGAGAGGGGCAAGGTTCAATTGC
ACACGACGGGTACGTGATCATCTGGAGTGGCGCCCGTGCTGGCACCAAGG
ACAAGAGGGGCGTACACGGTGTGGGCATAGCGATCAAGGAGACCATGTGG
GAGAGTGTGGGCGAGGAAGGTAGGAAGGTGGAGTGCATTGGTCCGAGGCT
GATGAAGGTGCGTTTACGAATTGGCCGCACCTGCGGAATAACTTTCGTGG
TGAGGTACGCCCCCACGGAAACTGTCCGCACCACCGCGGGCGGTGATATT
AACGCCAAGGACTCCTTCTGGACTGCTCTCGACGCAGTGATCCGGGAGGT
TCACAGCCATGACCATCTCGTGGTGCTAATGGACGCCAACGCACGCACTG
GTAGGAGGCGAGACGGGTGCTGCGATGCCAAGATTATGGGCGTGTACGGA
CGCGACATTATGAACAACAACGGGGAACGACTCCTTGGACTGGCATCAAA
CAATCAACTCTCCCTGACCAATACCTACTTCCGAACACCGTAA
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protein sequence of EsuBft5543_2a-0001

>EsuBft5543_2 ID=EsuBft5543_2|Name=EsuBft5543_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=362bp
MLEPSDDLKNTHTISNKWVRKPEEVHLQSLQHVCMLTTELHAHTLQIDYS
SSITPLVPHLTKMNIVGGWCPKVQLTAALAQRGSEEAQTVAVARGKNRAL
QRWIDARKFAARKIRKKAHPQREVDRERHETAAAVKAAAKKKAREGDLSF
GTFNVRTLAYSGRNPIGHNVMTVMQICSATGCDVIGLQETRREGQGSIAH
DGYVIIWSGARAGTKDKRGVHGVGIAIKETMWESVGEEGRKVECIGPRLM
KVRLRIGRTCGITFVVRYAPTETVRTTAGGDINAKDSFWTALDAVIREVH
SHDHLVVLMDANARTGRRRDGCCDAKIMGVYGRDIMNNNGERLLGLASNN
QLSLTNTYFRTP
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mRNA from alignment at Scaffold_544:189723..191499-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft5543_2a-0001 ID=EsuBft5543_2a-0001|Name=EsuBft5543_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1777bp|location=Sequence derived from alignment at Scaffold_544:189723..191499- (Ectocarpus subulatus male Bft15b)
CGTGTCAGTTGCTAATCCCAAAATCTAGCAAAGACTCGGTCCGTGGTCAC AAAAATGCTAGAGCCATCAGATGATCTAAAGAACACACACACTATTAGCA ATAAATGGGTACGCAAGCCCGAGGAGGTACACCTGCAGTCCCTGCAGCAC GTTTGCATGCTCACAACTGAACTACACGCCCACACACTACAAATCGACTA CAGCAGCAGCATCACCCCCCTTGTCCCGCATTTAACCAAAATGAATGTTT GTCGACTACAGCGTACTGCTGTCTGAAGTGCTGTCTGTACAATAACAACA ACACCATGGTGCATGCTACACAAGCTCGGGGCATGCAGCTGCTGCCTGAA GTGCTGTCAAAATGAGTCCGTAGACATACAATGAAGCAGAACACCCAACC AAAGCCATCATTGCAATTGAAAATCACCCGAATCTATCCAGATCATCTGT GTTAGGCACAGCAGTGTAAACATCGACACTGACTAGGAATCGTTCCACAT TGAAGGGGTCTTCCACGATGCAGGTACACAATTACAAGCACCCGGGATAT CCGCGCCATCTGCCGCGTCTCTCTACAAAACAACCAGTGACGTCATCACA CACTTCCCCCCCTCGGCCTGCTCCCCGGCCGGGGCCGAAATCGACTTAGT GAGTCCCTCGCGGGCGAACCAGGCCACAACAGATAGTAGGCGGGTGGTGT CCCAAGGTGCAACTCACCGCCGCGCTGGCTCAGCGTGGCAGTGAGGAAGC ACAGACGGTGGCAGTGGCGAGAGGTGTGTATGGACACTGTTCCCGCGGCA GTAATGCAAAGCGGCAAACTGCACCTGGCAACCACCGTCGCGGGGCCCAC GAAGCTGGAGGAGTAGAGAGATTCGTAGACACCACGTCAGTAAGCATCAC TCGAGGGAGAAGGGAGAACCGCGGGCACCGCGGGTAGGGAGTGCTGCACC CTCCTCGTCAAAACACCACAGGCAAGAACCGAGCTCTGCAGAGATGGATT GATGCGAGGAAATTCGCCGCTCGGAAAATACGGAAGAAAGCACACCCGCA ACGCGAGGTGGACCGAGAGAGACACGAGACCGCAGCGGCCGTCAAGGCGG CTGCGAAGAAGAAGGCACGAGAGGGCGACCTATCGTTCGGCACGTTCAAC GTACGCACGCTCGCCTACAGCGGTAGGAACCCCATCGGTCACAACGTGAT GACGGTCATGCAGATTTGTTCCGCGACCGGCTGTGATGTGATAGGACTTC AGGAGACCCGACGAGAGGGGCAAGGTTCAATTGCACACGACGGGTACGTG ATCATCTGGAGTGGCGCCCGTGCTGGCACCAAGGACAAGAGGGGCGTACA CGGTGTGGGCATAGCGATCAAGGAGACCATGTGGGAGAGTGTGGGCGAGG AAGGTAGGAAGGTGGAGTGCATTGGTCCGAGGCTGATGAAGGTGCGTTTA CGAATTGGCCGCACCTGCGGAATAACTTTCGTGGTGAGGTACGCCCCCAC GGAAACTGTCCGCACCACCGCGGGCGGTGATATTAACGCCAAGGACTCCT TCTGGACTGCTCTCGACGCAGTGATCCGGGAGGTTCACAGCCATGACCAT CTCGTGGTGCTAATGGACGCCAACGCACGCACTGGTAGGAGGCGAGACGG GTGCTGCGATGCCAAGATTATGGGCGTGTACGGACGCGACATTATGAACA ACAACGGGGAACGACTCCTTGGACTGGCATCAAACAATCAACTCTCCCTG ACCAATACCTACTTCCGAACACCGTAA
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Coding sequence (CDS) from alignment at Scaffold_544:189723..191499-

>EsuBft5543_2a-0001 ID=EsuBft5543_2a-0001|Name=EsuBft5543_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1089bp|location=Sequence derived from alignment at Scaffold_544:189723..191499- (Ectocarpus subulatus male Bft15b)
ATGCTAGAGCCATCAGATGATCTAAAGAACACACACACTATTAGCAATAA
ATGGGTACGCAAGCCCGAGGAGGTACACCTGCAGTCCCTGCAGCACGTTT
GCATGCTCACAACTGAACTACACGCCCACACACTACAAATCGACTACAGC
AGCAGCATCACCCCCCTTGTCCCGCATTTAACCAAAATGAATATAGTAGG
CGGGTGGTGTCCCAAGGTGCAACTCACCGCCGCGCTGGCTCAGCGTGGCA
GTGAGGAAGCACAGACGGTGGCAGTGGCGAGAGGCAAGAACCGAGCTCTG
CAGAGATGGATTGATGCGAGGAAATTCGCCGCTCGGAAAATACGGAAGAA
AGCACACCCGCAACGCGAGGTGGACCGAGAGAGACACGAGACCGCAGCGG
CCGTCAAGGCGGCTGCGAAGAAGAAGGCACGAGAGGGCGACCTATCGTTC
GGCACGTTCAACGTACGCACGCTCGCCTACAGCGGTAGGAACCCCATCGG
TCACAACGTGATGACGGTCATGCAGATTTGTTCCGCGACCGGCTGTGATG
TGATAGGACTTCAGGAGACCCGACGAGAGGGGCAAGGTTCAATTGCACAC
GACGGGTACGTGATCATCTGGAGTGGCGCCCGTGCTGGCACCAAGGACAA
GAGGGGCGTACACGGTGTGGGCATAGCGATCAAGGAGACCATGTGGGAGA
GTGTGGGCGAGGAAGGTAGGAAGGTGGAGTGCATTGGTCCGAGGCTGATG
AAGGTGCGTTTACGAATTGGCCGCACCTGCGGAATAACTTTCGTGGTGAG
GTACGCCCCCACGGAAACTGTCCGCACCACCGCGGGCGGTGATATTAACG
CCAAGGACTCCTTCTGGACTGCTCTCGACGCAGTGATCCGGGAGGTTCAC
AGCCATGACCATCTCGTGGTGCTAATGGACGCCAACGCACGCACTGGTAG
GAGGCGAGACGGGTGCTGCGATGCCAAGATTATGGGCGTGTACGGACGCG
ACATTATGAACAACAACGGGGAACGACTCCTTGGACTGGCATCAAACAAT
CAACTCTCCCTGACCAATACCTACTTCCGAACACCGTAA
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