EsuBft98_3 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	EsuBft98_3a-0001
Unique Name	EsuBft98_3
Type	polypeptide
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length	165

Homology

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: D7G8J7_ECTSI (U6 snRNA-associated Sm-like protein LSm4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J7_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 1.160e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGR 96
            MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGR
Sbjct:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGR 96

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2E5C6_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E5C6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.830e-42
Identity = 72/98 (73.47%), Postives = 84/98 (85.71%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKR--AMGGRGR 96
            MLPLSLL+TAQG PMLVELKNGDTYNGRL NCDSWMNI L++VI TSRD D+F K+ E Y+RGNSIKY+ IPE+V+D+VQEEDL +E R  + GGRGR
Sbjct:   15 MLPLSLLRTAQGHPMLVELKNGDTYNGRLVNCDSWMNINLREVICTSRDGDRFWKLPECYIRGNSIKYLRIPEDVIDLVQEEDLKQETRNASRGGRGR 112

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A836C9X5_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.590e-41
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGG 93
            MLPLSLL+TAQ  PMLVELKNGDTYNGRLD CD+WMNIKL+DVI+TSRD D+F K+ EVYVRG SIKY+TIP+EVL+MV EE+  KEKRA  G
Sbjct:    1 MLPLSLLRTAQSHPMLVELKNGDTYNGRLDMCDNWMNIKLRDVIWTSRDGDRFWKLPEVYVRGTSIKYMTIPDEVLEMVVEEEEGKEKRAAAG 93

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2FS84_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FS84_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.850e-40
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKR 89
            MLPLSLL+TAQG PMLVELKNGDTYNGRL NCDSWMNI L++VI TSRD D+F K+ E Y+RGNSIKY+ IPE+V+D+VQEEDL +E R
Sbjct:   14 MLPLSLLRTAQGHPMLVELKNGDTYNGRLVNCDSWMNINLREVICTSRDGDRFWKLPECYIRGNSIKYLRIPEDVIDLVQEEDLKQESR 102

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: W7TE23_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE23_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.330e-39
Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEK 88
            MLPLSLLKTAQG PMLVELKNGDTYNGRL +CD+WMNI L+DVI TSRD D+F K+ E YVRGNSIKY+ +PEEV+DMV EEDL +E+
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDTWMNITLRDVICTSRDGDRFWKIPECYVRGNSIKYLRVPEEVIDMVNEEDLERER 88

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2UV99_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV99_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.010e-39
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKE----KRAMGGRG 95
            MLPLSLLKTAQG PMLVELKNGDTYNGRL +CDSWMNI L++VI TSRD D+F ++ E Y+RGNSIKY+ IP+EV+DMV EE + KE     R  GGRG
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDSWMNINLREVICTSRDGDRFWRLPECYIRGNSIKYLRIPDEVIDMVNEEAMQKEVRMATRGRGGRG 99

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2W2A9_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.560e-39
Identity = 69/98 (70.41%), Postives = 80/98 (81.63%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRA--MGGRGR 96
            MLPLSLL+TAQG PMLVELKNGDTYNGRL NCDSWMNI LK+VI TSRD D+F K+ E Y+RGNSIKY+ IPEEV+DMV E++   +K +    GRGR
Sbjct:    9 MLPLSLLRTAQGHPMLVELKNGDTYNGRLVNCDSWMNINLKEVICTSRDGDRFWKLAECYIRGNSIKYLRIPEEVIDMVPEDNFKADKHSGRHAGRGR 106

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: H3G5G4_PHYRM (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5G4_PHYRM)

HSP 1 Score: 137 bits (345), Expect = 6.940e-39
Identity = 65/96 (67.71%), Postives = 81/96 (84.38%), Query Frame = 0

Query:    2 LPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSK-EKRAMGGRGR 96
            LPLSLLKTAQG PMLVELKNGDTYNG L NCD+WMN+ L++VI TS+D D+F KM E Y+RGN+IKY+ +P E+LDMV EEDL++ +++A  GRGR
Sbjct:    1 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEEDLNRRDRQANRGRGR 96

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: G4ZVC6_PHYSP (U6 snRNA-associated Sm-like protein LSm4 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZVC6_PHYSP)

HSP 1 Score: 138 bits (347), Expect = 9.970e-39
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 0

Query:    2 LPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSK-EKRAMGGRGR 96
            LPLSLLKTAQG PMLVELKNGDTYNG L NCD+WMN+ L++VI TS+D D+F KM E Y+RGN+IKY+ +P E+LDMV EED SK +++A  GRGR
Sbjct:    4 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEEDFSKRDRQANRGRGR 99

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A6A3LNI3_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNI3_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.230e-38
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKR 89
            MLPLSLLKTAQG PMLVELKNGDTYNG L NCD+WMN+ L++VI TS+D D+F KM E Y+RGN+IKY+ +P E+LDMV EED SK  R
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEEDFSKRDR 89

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: D7G8J7_ECTSI (U6 snRNA-associated Sm-like protein LSm4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J7_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.740e-54
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGR 308
            MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGR
Sbjct:    1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGR 96

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2E5C6_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E5C6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.840e-38
Identity = 72/98 (73.47%), Postives = 84/98 (85.71%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKR--AMGGRGR 308
            MLPLSLL+TAQG PMLVELKNGDTYNGRL NCDSWMNI L++VI TSRD D+F K+ E Y+RGNSIKY+ IPE+V+D+VQEEDL +E R  + GGRGR
Sbjct:   15 MLPLSLLRTAQGHPMLVELKNGDTYNGRLVNCDSWMNINLREVICTSRDGDRFWKLPECYIRGNSIKYLRIPEDVIDLVQEEDLKQETRNASRGGRGR 112

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A836C9X5_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X5_9STRA)

HSP 1 Score: 145 bits (365), Expect = 5.120e-37
Identity = 71/93 (76.34%), Postives = 81/93 (87.10%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGG 299
            MLPLSLL+TAQ  PMLVELKNGDTYNGRLD CD+WMNIKL+DVI+TSRD D+F K+ EVYVRG SIKY+TIP+EVL+MV EE+  KEKRA  G
Sbjct:    1 MLPLSLLRTAQSHPMLVELKNGDTYNGRLDMCDNWMNIKLRDVIWTSRDGDRFWKLPEVYVRGTSIKYMTIPDEVLEMVVEEEEGKEKRAAAG 93

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2FS84_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FS84_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.070e-36
Identity = 67/89 (75.28%), Postives = 78/89 (87.64%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKR 287
            MLPLSLL+TAQG PMLVELKNGDTYNGRL NCDSWMNI L++VI TSRD D+F K+ E Y+RGNSIKY+ IPE+V+D+VQEEDL +E R
Sbjct:   14 MLPLSLLRTAQGHPMLVELKNGDTYNGRLVNCDSWMNINLREVICTSRDGDRFWKLPECYIRGNSIKYLRIPEDVIDLVQEEDLKQESR 102

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: W7TE23_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TE23_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.260e-35
Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEK 284
            MLPLSLLKTAQG PMLVELKNGDTYNGRL +CD+WMNI L+DVI TSRD D+F K+ E YVRGNSIKY+ +PEEV+DMV EEDL +E+
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDTWMNITLRDVICTSRDGDRFWKIPECYVRGNSIKYLRVPEEVIDMVNEEDLERER 88

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2UV99_9STRA (U6 snRNA-associated Sm-like protein LSm4 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV99_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.700e-35
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKE----KRAMGGRG 305
            MLPLSLLKTAQG PMLVELKNGDTYNGRL +CDSWMNI L++VI TSRD D+F ++ E Y+RGNSIKY+ IP+EV+DMV EE + KE     R  GGRG
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGDTYNGRLVSCDSWMNINLREVICTSRDGDRFWRLPECYIRGNSIKYLRIPDEVIDMVNEEAMQKEVRMATRGRGGRG 99

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A7S2W2A9_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A9_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.470e-35
Identity = 69/98 (70.41%), Postives = 80/98 (81.63%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRA--MGGRGR 308
            MLPLSLL+TAQG PMLVELKNGDTYNGRL NCDSWMNI LK+VI TSRD D+F K+ E Y+RGNSIKY+ IPEEV+DMV E++   +K +    GRGR
Sbjct:    9 MLPLSLLRTAQGHPMLVELKNGDTYNGRLVNCDSWMNINLKEVICTSRDGDRFWKLAECYIRGNSIKYLRIPEEVIDMVPEDNFKADKHSGRHAGRGR 106

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: H3G5G4_PHYRM (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5G4_PHYRM)

HSP 1 Score: 137 bits (345), Expect = 8.380e-35
Identity = 65/96 (67.71%), Postives = 81/96 (84.38%), Query Frame = 3

Query:   24 LPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSK-EKRAMGGRGR 308
            LPLSLLKTAQG PMLVELKNGDTYNG L NCD+WMN+ L++VI TS+D D+F KM E Y+RGN+IKY+ +P E+LDMV EEDL++ +++A  GRGR
Sbjct:    1 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEEDLNRRDRQANRGRGR 96

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: G4ZVC6_PHYSP (U6 snRNA-associated Sm-like protein LSm4 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZVC6_PHYSP)

HSP 1 Score: 138 bits (347), Expect = 1.280e-34
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 3

Query:   24 LPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSK-EKRAMGGRGR 308
            LPLSLLKTAQG PMLVELKNGDTYNG L NCD+WMN+ L++VI TS+D D+F KM E Y+RGN+IKY+ +P E+LDMV EED SK +++A  GRGR
Sbjct:    4 LPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEEDFSKRDRQANRGRGR 99

[Close]

BLAST of EsuBft98_3a-0001 vs. uniprot
Match: A0A6A3LNI3_9STRA (U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNI3_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.240e-34
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 3

Query:   21 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKR 287
            MLPLSLLKTAQG PMLVELKNGDTYNG L NCD+WMN+ L++VI TS+D D+F KM E Y+RGN+IKY+ +P E+LDMV EED SK  R
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECYIRGNTIKYIRVPNEILDMVNEEDFSKRDR 89

The following BLAST results are available for this feature:

BLAST of EsuBft98_3a-0001 vs. uniprot
BLAST of EsuBft98_3a-0001 vs. uniprot

BLAST of EsuBft98_3a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8J7_ECTSI	1.160e-59	100.00	U6 snRNA-associated Sm-like protein LSm4 n=2 Tax=E...	[more]
A0A7S2E5C6_9STRA	3.830e-42	73.47	U6 snRNA-associated Sm-like protein LSm4 (Fragment...	[more]
A0A836C9X5_9STRA	3.590e-41	76.34	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=T...	[more]
A0A7S2FS84_9STRA	2.850e-40	75.28	U6 snRNA-associated Sm-like protein LSm4 (Fragment...	[more]
W7TE23_9STRA	2.330e-39	76.14	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=N...	[more]
A0A7S2UV99_9STRA	3.010e-39	69.70	U6 snRNA-associated Sm-like protein LSm4 (Fragment...	[more]
A0A7S2W2A9_9STRA	3.560e-39	70.41	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=R...	[more]
H3G5G4_PHYRM	6.940e-39	67.71	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=P...	[more]
G4ZVC6_PHYSP	9.970e-39	68.75	U6 snRNA-associated Sm-like protein LSm4 n=7 Tax=P...	[more]
A0A6A3LNI3_9STRA	4.230e-38	70.79	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=P...	[more]

Pages

BLAST of EsuBft98_3a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8J7_ECTSI	1.740e-54	100.00	U6 snRNA-associated Sm-like protein LSm4 n=2 Tax=E...	[more]
A0A7S2E5C6_9STRA	5.840e-38	73.47	U6 snRNA-associated Sm-like protein LSm4 (Fragment...	[more]
A0A836C9X5_9STRA	5.120e-37	76.34	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=T...	[more]
A0A7S2FS84_9STRA	3.070e-36	75.28	U6 snRNA-associated Sm-like protein LSm4 (Fragment...	[more]
W7TE23_9STRA	2.260e-35	76.14	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=N...	[more]
A0A7S2UV99_9STRA	2.700e-35	69.70	U6 snRNA-associated Sm-like protein LSm4 (Fragment...	[more]
A0A7S2W2A9_9STRA	3.470e-35	70.41	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=R...	[more]
H3G5G4_PHYRM	8.380e-35	67.71	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=P...	[more]
G4ZVC6_PHYSP	1.280e-34	68.75	U6 snRNA-associated Sm-like protein LSm4 n=7 Tax=P...	[more]
A0A6A3LNI3_9STRA	3.240e-34	70.79	U6 snRNA-associated Sm-like protein LSm4 n=1 Tax=P...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001163	LSM domain, eukaryotic/archaea-type	SMART	SM00651	Sm3	coord: 5..71 e-value: 3.9E-17 score: 72.9
IPR001163	LSM domain, eukaryotic/archaea-type	PFAM	PF01423	LSM	coord: 6..70 e-value: 1.0E-16 score: 60.4
None	No IPR available	GENE3D	2.30.30.100		coord: 1..83 e-value: 3.8E-31 score: 108.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..130
None	No IPR available	PANTHER	PTHR23338:SF42	SM-LIKE PROTEIN LSM4	coord: 1..112
IPR027141	Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3	PANTHER	PTHR23338	SMALL NUCLEAR RIBONUCLEOPROTEIN SM	coord: 1..112
IPR034101	Sm-like protein Lsm4	CDD	cd01723	LSm4	coord: 2..77 e-value: 7.1924E-45 score: 140.404
IPR010920	LSM domain superfamily	SUPERFAMILY	50182	Sm-like ribonucleoproteins	coord: 3..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold_510	contig	Scaffold_510:257973..260902 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b	2020-06-19

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft98_3a-0001	EsuBft98_3a-0001	Ectocarpus subulatus male Bft15b	mRNA	Scaffold_510 256665..260922 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>EsuBft98_3 ID=EsuBft98_3|Name=EsuBft98_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=165bp
MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDA
DKFVKMVEVYVRGNSIKYVTIPEEVLDMVQEEDLSKEKRAMGGRGRGRGR
GGRDGGRGGGRGRGDGRGRGRGRGGRDGGRGGGGRGRGGGRGGGRGRGEG
RGAAGRGDGGGRGRG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001163	LSM_dom_euk/arc
IPR027141	LSm4/Sm_D1/D3
IPR034101	Lsm4
IPR010920	LSM_dom_sf