Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft100_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 121 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft100_11a-0001 ID=EsuBft100_11a-0001|Name=EsuBft100_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1215bp|location=Sequence derived from alignment at Scaffold_441:204763..205977+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCGTGGTGTACATCGGGACTGTTTTTACAGGGCGATTATTTTTTAAGCC
TGCGGCTCCTCGTACGTGTACGAGGCCGTGTATGTGCGTTCGAGTAATGA
AAGCACAGGAGGATGTGGGGAGTTCAATAACATGCACTAGTTGAAACTAT
TGATTGCTAGACTATCCTCATTTTTGTTTTCATCGACTTGCGATTTTTAG
TCTGGGACAAAAGAAGCATGTAGCGATATCCTAGCTCTGGCTGGGCTTGA
GTTGCCTCCTTGGGTGCCATCCGCTCTTTTTATCATTGGCCTCTTGGGTT
CTGGCGGGAGGGCTTACATGGGTCTTCGTTGCGTTTTAATACGGAGTTTG
CGAACATCGGAATTCGATTTGATTTCGATCTTTTTTATCCACCCGAGCGC
CGAAGACCGCGGGATCTTTTAGGAATTTGATCTTTCGCTTTATCGAATTG
CCCTCAAAGACCGCAGAAAAGATCGAATTCCATCTTGCTTGCATCTATCT
TTTTGGGAACAGTTTCTGGTTGGCCTGTACTTCCCGAGATACTCCCGACG
TTGTCCGGACACATGCCGCACCAGCCCGTGAGGCTAGCTATGCACCCACA
CCTCGGCCGTGATACACACTACCATGGCGAGCCAGCTACAGTACCGCAAG
ACAGTTAGACAGTCGTCACTGCACGCCAGACCCGGTGCAATGCATGCTGC
CGATATGGTGCATTTGCGCCCTTTGAACCGCAGCATACCGTTCTACATGC
TCTTCTTGAGTGACACACCAAGTCGGCGTGACGAGGATGACGGCGATGCT
GCGAGCGGCATAGATCTTAGGAGTGCTGCACAGGTGGAGGCGGAGGTGAC
GGGGTTAGGGATGCTTCAAGCGGCGTGGGAGCGTGAAGAGCTGCTGTGCG
TGCGTCCTGTGGACCGTGCTCCGGTGATACGTCTGTCGCGGACGATCGAC
TCCGTTGATGACTGCGACGCGTATCACTAAACCGCGGGGCAGCGGTAGTA
GGAGGAGGAGGTCCTTGGCCTTCGTGCTGTGTGTTCACCGAAACTCTGGC
GAGGGGAGCGGCCCTCGCCGGAGGACTCGTGTTGCCATGAACACCCGGCA
ACTGAACCGGGCCAGCCTTCTCATGAGTACGTTGACCTCCATCGTTCTCC
ATGATTGTTTAACAGCGGTTGTGAGTGTAATGTGGTGGTAGCCTTGCGGT
GGGGGTGGAGGCGGA back to topprotein sequence of EsuBft100_11a-0001 >EsuBft100_11 ID=EsuBft100_11|Name=EsuBft100_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=118bp
MASQLQYRKTVRQSSLHARPGAMHAADMVHLRPLNRSIPFYMLFLSDTPS
RRDEDDGDAASGIDLRSAAQVEAEVTGLGMLQAAWEREELLCVRPVDRAP
VIRLSRTIDSVDDCDAYH back to topmRNA from alignment at Scaffold_441:204763..205977+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft100_11a-0001 ID=EsuBft100_11a-0001|Name=EsuBft100_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1215bp|location=Sequence derived from alignment at Scaffold_441:204763..205977+ (Ectocarpus subulatus male Bft15b)
GTCGTGGTGTACATCGGGACTGTTTTTACAGGGCGATTATTTTTTAAGCC
TGCGGCTCCTCGTACGTGTACGAGGCCGTGTATGTGCGTTCGAGTAATGA
AAGCACAGGAGGATGTGGGGAGTTCAATAACATGCACTAGTTGAAACTAT
TGATTGCTAGACTATCCTCATTTTTGTTTTCATCGACTTGCGATTTTTAG
TCTGGGACAAAAGAAGCATGTAGCGATATCCTAGCTCTGGCTGGGCTTGA
GTTGCCTCCTTGGGTGCCATCCGCTCTTTTTATCATTGGCCTCTTGGGTT
CTGGCGGGAGGGCTTACATGGGTCTTCGTTGCGTTTTAATACGGAGTTTG
CGAACATCGGAATTCGATTTGATTTCGATCTTTTTTATCCACCCGAGCGC
CGAAGACCGCGGGATCTTTTAGGAATTTGATCTTTCGCTTTATCGAATTG
CCCTCAAAGACCGCAGAAAAGATCGAATTCCATCTTGCTTGCATCTATCT
TTTTGGGAACAGTTTCTGGTTGGCCTGTACTTCCCGAGATACTCCCGACG
TTGTCCGGACACATGCCGCACCAGCCCGTGAGGCTAGCTATGCACCCACA
CCTCGGCCGTGATACACACTACCATGGCGAGCCAGCTACAGTACCGCAAG
ACAGTTAGACAGTCGTCACTGCACGCCAGACCCGGTGCAATGCATGCTGC
CGATATGGTGCATTTGCGCCCTTTGAACCGCAGCATACCGTTCTACATGC
TCTTCTTGAGTGACACACCAAGTCGGCGTGACGAGGATGACGGCGATGCT
GCGAGCGGCATAGATCTTAGGAGTGCTGCACAGGTGGAGGCGGAGGTGAC
GGGGTTAGGGATGCTTCAAGCGGCGTGGGAGCGTGAAGAGCTGCTGTGCG
TGCGTCCTGTGGACCGTGCTCCGGTGATACGTCTGTCGCGGACGATCGAC
TCCGTTGATGACTGCGACGCGTATCACTAAACCGCGGGGCAGCGGTAGTA
GGAGGAGGAGGTCCTTGGCCTTCGTGCTGTGTGTTCACCGAAACTCTGGC
GAGGGGAGCGGCCCTCGCCGGAGGACTCGTGTTGCCATGAACACCCGGCA
ACTGAACCGGGCCAGCCTTCTCATGAGTACGTTGACCTCCATCGTTCTCC
ATGATTGTTTAACAGCGGTTGTGAGTGTAATGTGGTGGTAGCCTTGCGGT
GGGGGTGGAGGCGGA back to topCoding sequence (CDS) from alignment at Scaffold_441:204763..205977+ >EsuBft100_11a-0001 ID=EsuBft100_11a-0001|Name=EsuBft100_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=357bp|location=Sequence derived from alignment at Scaffold_441:204763..205977+ (Ectocarpus subulatus male Bft15b)
ATGGCGAGCCAGCTACAGTACCGCAAGACAGTTAGACAGTCGTCACTGCA
CGCCAGACCCGGTGCAATGCATGCTGCCGATATGGTGCATTTGCGCCCTT
TGAACCGCAGCATACCGTTCTACATGCTCTTCTTGAGTGACACACCAAGT
CGGCGTGACGAGGATGACGGCGATGCTGCGAGCGGCATAGATCTTAGGAG
TGCTGCACAGGTGGAGGCGGAGGTGACGGGGTTAGGGATGCTTCAAGCGG
CGTGGGAGCGTGAAGAGCTGCTGTGCGTGCGTCCTGTGGACCGTGCTCCG
GTGATACGTCTGTCGCGGACGATCGACTCCGTTGATGACTGCGACGCGTA
TCACTAA back to top
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