EsuBft1013_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_373:537237..539100+
coding sequence from alignment at Scaffold_373:537237..539100+

spliced messenger RNA

>EsuBft1013_2a-0001 ID=EsuBft1013_2a-0001|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=432bp|location=Sequence derived from alignment at Scaffold_373:537237..539100+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAAAAAAAATAGGCACGTCTCAAACCCAGACCGATGAGCTAGCTCT
TCTCGACGACGACGACAGCATGGACCCACAAGACCCGGAGGACGAGACAC
AAGGAATGGAGATCCCGACAGGCTTTCGCATTCAAGAAGTTAAACCCGTT
GCTCTTGACAGATTGCTTTTTCGACGTGGAGTGCTCGTCAGGCTAGGGAT
GGGGTGGTTTGGAGGGTTGATCATTCAGCAATCTCAGCAGGACACTCGCC
ACCTGTACGACTACTGTGTGCAGCTGGAGCTAGACCAGAGTACGCGCAAG
ATGAAGCTGCTCTTAGACGAGTACACCGGAGATCCGGATGCGGCGGTAGG
CTCCTGGGTTTTGCTTGAGAGCGTTAGTAGATCGGGGAGGGTACGTAGGA
CCAAGGTCACCCTTGTGGACCACGATGATTGA

protein sequence of EsuBft1013_2a-0001

>EsuBft1013_2 ID=EsuBft1013_2|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=143bp
MQKKIGTSQTQTDELALLDDDDSMDPQDPEDETQGMEIPTGFRIQEVKPV
ALDRLLFRRGVLVRLGMGWFGGLIIQQSQQDTRHLYDYCVQLELDQSTRK
MKLLLDEYTGDPDAAVGSWVLLESVSRSGRVRRTKVTLVDHDD

mRNA from alignment at Scaffold_373:537237..539100+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1013_2a-0001 ID=EsuBft1013_2a-0001|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1864bp|location=Sequence derived from alignment at Scaffold_373:537237..539100+ (Ectocarpus subulatus male Bft15b)
ATGCAAAAAAAAATAGGTGAGTTCATTAGTCTAATGTGACCCAAACGAAA
CAGACGTCACCTCCCCACTCGCTCGTGTGATTCACGATAATCTTTTCAAG
GAAATATCCGTTCAGAGTGCATAGATACTTTTGCCAGCGGCATCCACGGA
AGTTTGAATTCAACAGCGCCACAACTAAGAGCGACTGACACGTCACATGG
CTCGCTGAATCCCCTACACGGCAATTCCGCCCTTTCCCATCGCACCGAGC
AGATTGAGCGGACTCGTGGTGGAGTGAAAGAGTTCGTATCCGGTATCAGC
TTCCCGCCTCCGGCCCCGGAGTCCCGCCGATCCTGCCCTCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTCATTTCCTT
GTTGATGACGATGTCCACGTTGATATTTGCTTGGAATTGCTGATGTGCTG
TTTCCGCGTTCACGACTACGAGCAAATATGATAGGTTCATATTGAGTTTC
GCCGCGACACCGTACTTCTTGTGGTGTTTCACGGTGCCCCGTTCGCAGGC
ACGTCTCAAACCCAGACCGATGAGCTAGCTCTTCTCGACGACGACGACAG
CATGGACCCACAAGACCCGGAGGACGAGACACAAGGAATGGAGATCCCGA
CAGGCTTTCGCATTCAAGAAGTTAAACCCGTTGCTCTTGACAGATTGCTT
TTTCGACGTGGAGTGCTCGTCAGGCTAGGGATGGGGTGGTTTGGAGGGTT
GATCATTCAGCAATCTCAGCAGGACACTCGCCACCTGTACGACTACTGTG
TGCAGCTGGAGCTAGACCAGAGTACGCGCAAGATGAAGCTGCTCTTAGAC
GAGTACACCGGAGATCCGGATGCGGCGGTAGGCTCCTGGGTTTTGCTTGA
GAGCGTTAGTAGATCGGGGAGGGTACGTAGGACCAAGGTCACCCTTGTGG
ACCACGATGATTGA

Coding sequence (CDS) from alignment at Scaffold_373:537237..539100+

>EsuBft1013_2a-0001 ID=EsuBft1013_2a-0001|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=432bp|location=Sequence derived from alignment at Scaffold_373:537237..539100+ (Ectocarpus subulatus male Bft15b)
ATGCAAAAAAAAATAGGCACGTCTCAAACCCAGACCGATGAGCTAGCTCT
TCTCGACGACGACGACAGCATGGACCCACAAGACCCGGAGGACGAGACAC
AAGGAATGGAGATCCCGACAGGCTTTCGCATTCAAGAAGTTAAACCCGTT
GCTCTTGACAGATTGCTTTTTCGACGTGGAGTGCTCGTCAGGCTAGGGAT
GGGGTGGTTTGGAGGGTTGATCATTCAGCAATCTCAGCAGGACACTCGCC
ACCTGTACGACTACTGTGTGCAGCTGGAGCTAGACCAGAGTACGCGCAAG
ATGAAGCTGCTCTTAGACGAGTACACCGGAGATCCGGATGCGGCGGTAGG
CTCCTGGGTTTTGCTTGAGAGCGTTAGTAGATCGGGGAGGGTACGTAGGA
CCAAGGTCACCCTTGTGGACCACGATGATTGA