Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FI08 |
| ProteomeId | EsuBft1013_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 43 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.43e-64 |
| EggNOG OGs | 2DCSR@1|root,2S5KN@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1013_2a-0001 ID=EsuBft1013_2a-0001|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=432bp|location=Sequence derived from alignment at Scaffold_373:537237..539100+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCAAAAAAAAATAGGCACGTCTCAAACCCAGACCGATGAGCTAGCTCT
TCTCGACGACGACGACAGCATGGACCCACAAGACCCGGAGGACGAGACAC
AAGGAATGGAGATCCCGACAGGCTTTCGCATTCAAGAAGTTAAACCCGTT
GCTCTTGACAGATTGCTTTTTCGACGTGGAGTGCTCGTCAGGCTAGGGAT
GGGGTGGTTTGGAGGGTTGATCATTCAGCAATCTCAGCAGGACACTCGCC
ACCTGTACGACTACTGTGTGCAGCTGGAGCTAGACCAGAGTACGCGCAAG
ATGAAGCTGCTCTTAGACGAGTACACCGGAGATCCGGATGCGGCGGTAGG
CTCCTGGGTTTTGCTTGAGAGCGTTAGTAGATCGGGGAGGGTACGTAGGA
CCAAGGTCACCCTTGTGGACCACGATGATTGA back to topprotein sequence of EsuBft1013_2a-0001 >EsuBft1013_2 ID=EsuBft1013_2|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=143bp
MQKKIGTSQTQTDELALLDDDDSMDPQDPEDETQGMEIPTGFRIQEVKPV
ALDRLLFRRGVLVRLGMGWFGGLIIQQSQQDTRHLYDYCVQLELDQSTRK
MKLLLDEYTGDPDAAVGSWVLLESVSRSGRVRRTKVTLVDHDD back to topmRNA from alignment at Scaffold_373:537237..539100+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1013_2a-0001 ID=EsuBft1013_2a-0001|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1864bp|location=Sequence derived from alignment at Scaffold_373:537237..539100+ (Ectocarpus subulatus male Bft15b)
ATGCAAAAAAAAATAGGTGAGTTCATTAGTCTAATGTGACCCAAACGAAA
CAGACGTCACCTCCCCACTCGCTCGTGTGATTCACGATAATCTTTTCAAG
GAAATATCCGTTCAGAGTGCATAGATACTTTTGCCAGCGGCATCCACGGA
AGTTTGAATTCAACAGCGCCACAACTAAGAGCGACTGACACGTCACATGG
CTCGCTGAATCCCCTACACGGCAATTCCGCCCTTTCCCATCGCACCGAGC
AGATTGAGCGGACTCGTGGTGGAGTGAAAGAGTTCGTATCCGGTATCAGC
TTCCCGCCTCCGGCCCCGGAGTCCCGCCGATCCTGCCCTCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTCATTTCCTT
GTTGATGACGATGTCCACGTTGATATTTGCTTGGAATTGCTGATGTGCTG
TTTCCGCGTTCACGACTACGAGCAAATATGATAGGTTCATATTGAGTTTC
GCCGCGACACCGTACTTCTTGTGGTGTTTCACGGTGCCCCGTTCGCAGGC
ACGTCTCAAACCCAGACCGATGAGCTAGCTCTTCTCGACGACGACGACAG
CATGGACCCACAAGACCCGGAGGACGAGACACAAGGAATGGAGATCCCGA
CAGGCTTTCGCATTCAAGAAGTTAAACCCGTTGCTCTTGACAGATTGCTT
TTTCGACGTGGAGTGCTCGTCAGGCTAGGGATGGGGTGGTTTGGAGGGTT
GATCATTCAGCAATCTCAGCAGGACACTCGCCACCTGTACGACTACTGTG
TGCAGCTGGAGCTAGACCAGAGTACGCGCAAGATGAAGCTGCTCTTAGAC
GAGTACACCGGAGATCCGGATGCGGCGGTAGGCTCCTGGGTTTTGCTTGA
GAGCGTTAGTAGATCGGGGAGGGTACGTAGGACCAAGGTCACCCTTGTGG
ACCACGATGATTGA back to topCoding sequence (CDS) from alignment at Scaffold_373:537237..539100+ >EsuBft1013_2a-0001 ID=EsuBft1013_2a-0001|Name=EsuBft1013_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=432bp|location=Sequence derived from alignment at Scaffold_373:537237..539100+ (Ectocarpus subulatus male Bft15b)
ATGCAAAAAAAAATAGGCACGTCTCAAACCCAGACCGATGAGCTAGCTCT
TCTCGACGACGACGACAGCATGGACCCACAAGACCCGGAGGACGAGACAC
AAGGAATGGAGATCCCGACAGGCTTTCGCATTCAAGAAGTTAAACCCGTT
GCTCTTGACAGATTGCTTTTTCGACGTGGAGTGCTCGTCAGGCTAGGGAT
GGGGTGGTTTGGAGGGTTGATCATTCAGCAATCTCAGCAGGACACTCGCC
ACCTGTACGACTACTGTGTGCAGCTGGAGCTAGACCAGAGTACGCGCAAG
ATGAAGCTGCTCTTAGACGAGTACACCGGAGATCCGGATGCGGCGGTAGG
CTCCTGGGTTTTGCTTGAGAGCGTTAGTAGATCGGGGAGGGTACGTAGGA
CCAAGGTCACCCTTGTGGACCACGATGATTGA back to top
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