EsuBft457_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft457_6a-0001 ID=EsuBft457_6a-0001|Name=EsuBft457_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=553bp|location=Sequence derived from alignment at Scaffold_373:377406..379334- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GCTTGGGGCTGAAATCGCAATGCTGCGGGGATCAGGCGAGGAAGATGAAG
AAGGAAACCCTATTCTTCCAGAAATAGACGACAGATTTCTCACAGTGGGG
CAAAGGCTCCGGCGCCTGCGTGACGCCAGGGATAATCTTGAACGCGAGAA
GCAGAGGGCGCATTTGGAGTACAGTCGACAGGTGAAAAGCAATCTCCGAG
AACGAAAACGTTTCGTTCTGGCGGAGAAACGGGCCGGACGCATTGCCAAA
TCTATGGACACCAAACAGCTCGTGGAGGCATTGAAAGAGAGGGGTTATGC
GACCAAGGGATCAGAACAGTTGGACCAGCTTAGGCGTGTATTCATTGAGG
GCATTCAGCCAGAGATTCGCGTCCGCCTTCACGCTACTTCAAGATGGACT
AAGAGCAGAAACAAGCACCGAGAGAGGACGGACACCGTTGAAGTCGGCGA
GATCGTTGCGAGGAGGCAACAACTCACGTCGTCAAAGCGGGTCACTCCAT
TTTCTCCCTCGCCAATCACCAGGCTCAACGTGCGACACGCCGCCACCGTA
TGA
back to top

protein sequence of EsuBft457_6a-0001

>EsuBft457_6 ID=EsuBft457_6|Name=EsuBft457_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=177bp
MLRGSGEEDEEGNPILPEIDDRFLTVGQRLRRLRDARDNLEREKQRAHLE
YSRQVKSNLRERKRFVLAEKRAGRIAKSMDTKQLVEALKERGYATKGSEQ
LDQLRRVFIEGIQPEIRVRLHATSRWTKSRNKHRERTDTVEVGEIVARRQ
QLTSSKRVTPFSPSPITRLNVRHAATV
back to top

mRNA from alignment at Scaffold_373:377406..379334-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft457_6a-0001 ID=EsuBft457_6a-0001|Name=EsuBft457_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1929bp|location=Sequence derived from alignment at Scaffold_373:377406..379334- (Ectocarpus subulatus male Bft15b)
GCTTGGGGCTGAAATCGCAATGCTGCGGGTACGATTTCGATCGAAGTTTG
CGCTGTTCAAGACAAGGCCGACTGTGCGGTAGCATCACTTTTGGTTATGA
CGAAACGTTCACCATACTCTGATTGTTCATCACTGCCAGCAAAATTCATC
TCACAACAGCTTACCAGACGAACACATCCGGCTCGGGCAACAAACCTTAG
GCCTTCTTCCGCTACGTATGGGACATTCCGAGTTCGACATGGCACTCAAG
GTACGAAGGGTTACCGCATCCGGACGAAAACCCAGACTCCAGCCCAGGCT
GTGGGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGGGCCCCCCCCCCCCCCGCCATTGCCGCCGCCCGTTGT
GTCCAGGGATCAGGCGAGGAAGATGAAGAAGGAAACCCTATTCTTCCAGA
AATAGACGACAGATTTCTCACAGTGGGGCAAAGGCTCCGGCGCCTGCGTG
ACGCCAGGGATAATCTTGAACGCGAGAAGCAGAGGGCGCATTTGGAGTAC
AGGTCCGATGAAACCGGCTTCCCTCCGTTGTAACCACCTGCATGGCCAGG
ACGATTTACGACTAGACCAGCAGTACTCATCAGCTGGCTAATATGTAGGT
GTATCCGAGAGCTGAGTGACACGGGGCCAGGAGGCTAAACTTCGGTATGA
TTCGCCGTCGTCATCGATTGTATCGCCCACGATAGCGGGCTTGTACGGAC
GGTAAGCGCACAGCAGCACCAAAATCAGCATGGATAACAGGAACAAAAAC
ATCGCTCACGGTACTCTAGACGCCACTGAACCGTTGTGTTTTTTCCAGCA
TCAGATTGATGATTCGTAGTTCGACTTTTCCATCCACACGGTGCGGATAT
TATAAGGCACCGAGCGGCGACCGTTTTTGGAATGTGAAGGCAACCACATC
AACAACAGCAGTACCTCTCTAGCCGAAGAGCTCTGAACCATGCATCTCCT
TTTGCAGTCGACAGGTGAAAAGCAATCTCCGAGAACGAAAACGTTTCGTT
CTGGCGGAGAAACGGGCCGGACGCATTGCCAAATCTATGGACACCAAACA
GCTCGTGGAGGCATTGAAAGAGAGGGGTTATGCGACCAAGGGATCAGAAC
AGTTGGACCAGCTTAGGCGTGTATTCATTGAGGGCATTCAGCCAGAGATT
CGCGTCCGCCTTCACGCTACTTCAAGGTGAGCGCGAAACGGACCTGCGCC
CCACTAACGGAGATGCAGGGCGGCGAATTTCAGTGTGTGCAACAACAAAT
CCGAAGAACAGCGGTTTCACATGACGTTAACTCCCTTGTGGGTTTGGGGC
ATTCGATACGCGATTGTGTCGTGTTCAACATGTGAACAGGGCGTGTGTGC
GAAAAGCTGTTAATACAAACTCCATATGGCAACGCGATGGTGCGTCTGTC
AGGAAGGTACCCCCTGCAGGGTAGAGCGTAAGATGTGAACACAGCAGTTG
CACAGCTACAATAATAGCGCTACCTACAATATGGAGTTTGTCGACCTTCC
CGTGTTTTACCTTGTTGTGTATCAACACCCGCGAAAACTCTGACGCCAGA
TCTCAGTCGATGTACATCAGGGCAACCTCCAGTCGGGTTTGAGGTCCTTT
GCACGCGGACATTTCGCAGACTCCACTCCCCCGCTACCAACATTTTCCCC
TCTGACGCCCATTCCCCAGATGGACTAAGAGCAGAAACAAGCACCGAGAG
AGGACGGACACCGTTGAAGTCGGCGAGATCGTTGCGAGGAGGCAACAACT
CACGTCGTCAAAGCGGGTCACTCCATTTTCTCCCTCGCCAATCACCAGGC
TCAACGTGCGACACGCCGCCACCGTATGA
back to top

Coding sequence (CDS) from alignment at Scaffold_373:377406..379334-

>EsuBft457_6a-0001 ID=EsuBft457_6a-0001|Name=EsuBft457_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=534bp|location=Sequence derived from alignment at Scaffold_373:377406..379334- (Ectocarpus subulatus male Bft15b)
ATGCTGCGGGGATCAGGCGAGGAAGATGAAGAAGGAAACCCTATTCTTCC
AGAAATAGACGACAGATTTCTCACAGTGGGGCAAAGGCTCCGGCGCCTGC
GTGACGCCAGGGATAATCTTGAACGCGAGAAGCAGAGGGCGCATTTGGAG
TACAGTCGACAGGTGAAAAGCAATCTCCGAGAACGAAAACGTTTCGTTCT
GGCGGAGAAACGGGCCGGACGCATTGCCAAATCTATGGACACCAAACAGC
TCGTGGAGGCATTGAAAGAGAGGGGTTATGCGACCAAGGGATCAGAACAG
TTGGACCAGCTTAGGCGTGTATTCATTGAGGGCATTCAGCCAGAGATTCG
CGTCCGCCTTCACGCTACTTCAAGATGGACTAAGAGCAGAAACAAGCACC
GAGAGAGGACGGACACCGTTGAAGTCGGCGAGATCGTTGCGAGGAGGCAA
CAACTCACGTCGTCAAAGCGGGTCACTCCATTTTCTCCCTCGCCAATCAC
CAGGCTCAACGTGCGACACGCCGCCACCGTATGA
back to top