Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FZ45 |
| ProteomeId | EsuBft457_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 51 |
| Evalue | 4.79e-97 |
| EggNOG OGs | 2AWDH@1|root,2RZYI@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | DDE superfamily endonuclease |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft457_2a-0001 ID=EsuBft457_2a-0001|Name=EsuBft457_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=514bp|location=Sequence derived from alignment at Scaffold_373:356744..357524- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTACGAGATGGCCCGTCTGGAACTCGACGACATGCCCACGAGTATCGCAC
GTAGGGAAGTGACAGCATTCTTCAGCCCACAGGACTGGGTCAACTTTCTA
CGTTTCACGCAATCGCAAGTTATGCTGATGCTGGATCTGCTGTTGATCCC
CGCGTTCATCCGCACTGACTGCGGGTTCGTGGTAAGCGGACGGGAGGCTC
TGTGCGTGCTCCTGTATCGGCTCGCTTTCCCATGCCGCCTGAAGGACATG
CGCTTGGTTTTCGGGCTGAGCGAATCGTGTATCTGCGAAGCCTTCAACTG
GATGCTGCATTTTCTAGACTTCAGGTGGGGGTATCTGCTGTCCCTCGACG
TGGCACGCCTGCAGCCGCACCTGATCGAGTTTGCGGAAGCAATCTTCAAC
TCCGGCTGTCCTCCCACTCACTGTTGGGGATCTATCGATGGCACCGTGCG
GGCATTGCAAGGTGAAGTCANCTGTGCGTGCTCCTGTATCGGCTCGCTTT
CCCATGCCGCCTGA back to topprotein sequence of EsuBft457_2a-0001 >EsuBft457_2 ID=EsuBft457_2|Name=EsuBft457_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=168bp
MARLELDDMPTSIARREVTAFFSPQDWVNFLRFTQSQVMLMLDLLLIPAF
IRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWML
HFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPPTHCWGSIDGTVRAL
QGEVXCACSCIGSLSHAA back to topmRNA from alignment at Scaffold_373:356744..357524- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft457_2a-0001 ID=EsuBft457_2a-0001|Name=EsuBft457_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=781bp|location=Sequence derived from alignment at Scaffold_373:356744..357524- (Ectocarpus subulatus male Bft15b)
CTACGAGATGGCCCGTCTGGAACTCGACGACATGCCCACGAGTATCGCAC
GTAGGGAAGTGACAGCATTCTTCAGCCCACAGGACTGGGTCAACTTTCTA
CGTTTCACGCAATCGCAAGTGAGTACATGTCGCAGCTAAATATTATATCG
TTGCTGTGGCTTGGACATGTGTACTCCGGCTATCAGCAGCAGCAGTGTGT
GTGTCAGTGTGTCGTTCGACAGCCGCAGCAGTATGTCAGCATCCCGTGGG
TCGCGAGGGGTTAGCCGTTCTGGGTGCGTCAAGCCACCGTGCTATGTTAG
ACCCACAAGCCAACGGAGAGGTGTGCACTGGAATAACAAGTAACACATCG
TTCTTTGCTTTCCTGTGTGGTGTCACGTGATGCAGGTTATGCTGATGCTG
GATCTGCTGTTGATCCCCGCGTTCATCCGCACTGACTGCGGGTTCGTGGT
AAGCGGACGGGAGGCTCTGTGCGTGCTCCTGTATCGGCTCGCTTTCCCAT
GCCGCCTGAAGGACATGCGCTTGGTTTTCGGGCTGAGCGAATCGTGTATC
TGCGAAGCCTTCAACTGGATGCTGCATTTTCTAGACTTCAGGTGGGGGTA
TCTGCTGTCCCTCGACGTGGCACGCCTGCAGCCGCACCTGATCGAGTTTG
CGGAAGCAATCTTCAACTCCGGCTGTCCTCCCACTCACTGTTGGGGATCT
ATCGATGGCACCGTGCGGGCATTGCAAGGTGAAGTCANCTGTGCGTGCTC
CTGTATCGGCTCGCTTTCCCATGCCGCCTGA back to topCoding sequence (CDS) from alignment at Scaffold_373:356744..357524- >EsuBft457_2a-0001 ID=EsuBft457_2a-0001|Name=EsuBft457_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=507bp|location=Sequence derived from alignment at Scaffold_373:356744..357524- (Ectocarpus subulatus male Bft15b)
ATGGCCCGTCTGGAACTCGACGACATGCCCACGAGTATCGCACGTAGGGA
AGTGACAGCATTCTTCAGCCCACAGGACTGGGTCAACTTTCTACGTTTCA
CGCAATCGCAAGTTATGCTGATGCTGGATCTGCTGTTGATCCCCGCGTTC
ATCCGCACTGACTGCGGGTTCGTGGTAAGCGGACGGGAGGCTCTGTGCGT
GCTCCTGTATCGGCTCGCTTTCCCATGCCGCCTGAAGGACATGCGCTTGG
TTTTCGGGCTGAGCGAATCGTGTATCTGCGAAGCCTTCAACTGGATGCTG
CATTTTCTAGACTTCAGGTGGGGGTATCTGCTGTCCCTCGACGTGGCACG
CCTGCAGCCGCACCTGATCGAGTTTGCGGAAGCAATCTTCAACTCCGGCT
GTCCTCCCACTCACTGTTGGGGATCTATCGATGGCACCGTGCGGGCATTG
CAAGGTGAAGTCANCTGTGCGTGCTCCTGTATCGGCTCGCTTTCCCATGC
CGCCTGA back to top
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