EsuBft446_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft446_2a-0001 ID=EsuBft446_2a-0001|Name=EsuBft446_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2235bp|location=Sequence derived from alignment at Scaffold_373:269019..271253- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CAGCATGGGGGAGGCTAAATTATCCTTCGGATTAAAAACAGAAACAGCAG
CAACAGAAGACAACTGCACCCGTCTACCAAGGCTATTACCTAGTCCTCGA
GTTCGTTTAGGAGTACTTTCACCAGTATCCTCCTTGTTTTCGCTACCATC
ATTTTTATCCTCATTTCGACAAGAAGAATCTCTGGGCAGTTCTTCCCTAG
CCCTACGTTTCTTGTTGTGGGGAAGGTCATCTGGCTCAAACCCTTTGCTC
TCTTCCACTCCTCCATGTTTTCGTGCTCCGTCGTCGTCTTCGTCCTCCTT
TCTTTCCTTTCCCTTTCCATCGCCTTCGTCACTCCCAAAAGAATTACCCT
CACTACTATCGTTGTCGCAGAGGTCCCAACCGATTGGCCCTGGTGGAAGT
TGGTCGATCAGTAGCCCATGACGTTTGAGCACATCGAGAGTTCGCATCGA
CAGAAAACGAGCTAGCTCGAAGGTAAACCGTCTCCGAATCCTGTTAGTAT
GAAAAGCTTTCAGGCGAACTAAGGCCCTCTCGTCGTCAAAATTTTCCCGG
CAAAAAGCTTCGTGCGCCAAGTGGTTGGCGATAGCAACGATGAGTCGATT
GGTGCCTTTGCCAAGACCACCATTCGTTGAAAAAGCAGCAGTAAGGAGGG
TAGATCTAGACGGGTTGAAAGTTCCCGCATAGTGATTTGCCTTACTTGCA
GCTCGATCTTCGAGGGCTGATCCTGGCTTAAGGATCGACTTGTCGATGCT
TCGACCTGCTGATGGGTTGACGATTGTTACGTCGATCAGAATGGACTTGG
TGCAGAGGTCCTCTTCCTTCTCTCCTGCGTGTAATCCTGGGGGGATTACC
AAATCCATCTTGTGTACAATTGTAGCCCCTTTTCCCTACCAGTGCCTGTG
GTAAAAGGGGAAGAATCCTCAACGGCGATGGGCATATGGCACTCGCGCAG
TGTCTTGAGGACCACTCGAACCATCCTGTTATGGAGGAAGGTTGAGGCGC
CGGTCTTGGTGCAGACGAGGGAGTGGGCTCGGCTCAAGCGGTCCTTGCAT
GGTAACAATGCACCTGCACCACAAAGTTTGCCTGTGTTGCAGTCTGCTCG
ATCGTGACTCCCCAGTACACGACCGATTGACTCTCGATATAGATCAGGCA
GCATTCTTTCATCTGCTGACAACCCTTGCGTTGTCAACCACGACAAAACT
CCCTTGCCTTTCGCTTCCTCCAAGCGGATCAACGCCCTCTTCTTTGGCGT
TTCCTCGCCTACTACTTTCTGCAAGTCTGTCTCCACCATGTGGCGCACTG
CTGCATGAAGAGGTTTCGAAAGGAGAGCTTGGGCTCCAAAGACTTGGTAG
TGTTGACCAAATTCATTTCGGCTGAAGGTAGACGGTGGTTGATGTTCTAC
GTCAGGGTTTCCATCTTCACGGGGTTTTCCCGCCTTCCCTGCTTCCAACA
AGTAAACTCCTTTGAGGGCGGGGGTTAACTCATCACTTGTGGCAAGTTTA
GCCCATGACTGCCCAACAGCTTTTTCAAGCTTGTCTTTGGTGATGATTTC
CTCTAGCTTCTTCAGCGAGTCAATCAGAGCCAATCCTGTCGGTAGCTGGG
CAAGCCGGGGTAGACATTGCTCAACTGTGTATCCTGTCGATGCTTGCACT
GACTTGGAGAACACCAGCGCTTGCCCTGCCACAAAAGCCGATTCTCGAAT
GAGAACATTGCTCGTGATTCCTAGTCCTCCTTCTCGCATGGGTAGGTGCA
CCTGCGCTCGAGCTGTCCCTTTGAAGAAATCTACCTCCTCGCTCTTCGTC
GGGTCTGCGCGTACCTCTTTGACCGTTGGTATTCTCATGCTGTCGGCCAT
CTTGCCAAGGACGATCTTACTCATTGCCCACATCATCATGTTGTCATGTA
TTTTTGCGGCAGAGTTGGTGATAGACGGTGCAATCGTCCTCAGCAGATGG
AACAAACGTGGCACACCAGATGAACACAGCAGTTGATAGCTGACTTGGGG
GTCGTCAATCGTTGCTAGGCGGAGTATCAATTCCGCCGGGTCACCACGGG
CGATTTTGGAAACGAAATTCCTCTGGAACTCTTCTGTTCCTACTGGGATC
CCGACAACTGGGATGCCACCTTCAGCAACTGACAGACCAATTTTCGTCAA
TTGTTGCTGTTCGTCGTTTGTCAAAGAGGACGTGCAAAGACCTTCGGGGA
AAAGCACTTTGGATTTCGGGAGACTGAGCTCAATT
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protein sequence of EsuBft446_2a-0001

>EsuBft446_2 ID=EsuBft446_2|Name=EsuBft446_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=49bp
MFSCSVVVFVLLSFLSLSIAFVTPKRITLTTIVVAEVPTDWPWWKLVDQ
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mRNA from alignment at Scaffold_373:269019..271253-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft446_2a-0001 ID=EsuBft446_2a-0001|Name=EsuBft446_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2235bp|location=Sequence derived from alignment at Scaffold_373:269019..271253- (Ectocarpus subulatus male Bft15b)
CAGCATGGGGGAGGCTAAATTATCCTTCGGATTAAAAACAGAAACAGCAG
CAACAGAAGACAACTGCACCCGTCTACCAAGGCTATTACCTAGTCCTCGA
GTTCGTTTAGGAGTACTTTCACCAGTATCCTCCTTGTTTTCGCTACCATC
ATTTTTATCCTCATTTCGACAAGAAGAATCTCTGGGCAGTTCTTCCCTAG
CCCTACGTTTCTTGTTGTGGGGAAGGTCATCTGGCTCAAACCCTTTGCTC
TCTTCCACTCCTCCATGTTTTCGTGCTCCGTCGTCGTCTTCGTCCTCCTT
TCTTTCCTTTCCCTTTCCATCGCCTTCGTCACTCCCAAAAGAATTACCCT
CACTACTATCGTTGTCGCAGAGGTCCCAACCGATTGGCCCTGGTGGAAGT
TGGTCGATCAGTAGCCCATGACGTTTGAGCACATCGAGAGTTCGCATCGA
CAGAAAACGAGCTAGCTCGAAGGTAAACCGTCTCCGAATCCTGTTAGTAT
GAAAAGCTTTCAGGCGAACTAAGGCCCTCTCGTCGTCAAAATTTTCCCGG
CAAAAAGCTTCGTGCGCCAAGTGGTTGGCGATAGCAACGATGAGTCGATT
GGTGCCTTTGCCAAGACCACCATTCGTTGAAAAAGCAGCAGTAAGGAGGG
TAGATCTAGACGGGTTGAAAGTTCCCGCATAGTGATTTGCCTTACTTGCA
GCTCGATCTTCGAGGGCTGATCCTGGCTTAAGGATCGACTTGTCGATGCT
TCGACCTGCTGATGGGTTGACGATTGTTACGTCGATCAGAATGGACTTGG
TGCAGAGGTCCTCTTCCTTCTCTCCTGCGTGTAATCCTGGGGGGATTACC
AAATCCATCTTGTGTACAATTGTAGCCCCTTTTCCCTACCAGTGCCTGTG
GTAAAAGGGGAAGAATCCTCAACGGCGATGGGCATATGGCACTCGCGCAG
TGTCTTGAGGACCACTCGAACCATCCTGTTATGGAGGAAGGTTGAGGCGC
CGGTCTTGGTGCAGACGAGGGAGTGGGCTCGGCTCAAGCGGTCCTTGCAT
GGTAACAATGCACCTGCACCACAAAGTTTGCCTGTGTTGCAGTCTGCTCG
ATCGTGACTCCCCAGTACACGACCGATTGACTCTCGATATAGATCAGGCA
GCATTCTTTCATCTGCTGACAACCCTTGCGTTGTCAACCACGACAAAACT
CCCTTGCCTTTCGCTTCCTCCAAGCGGATCAACGCCCTCTTCTTTGGCGT
TTCCTCGCCTACTACTTTCTGCAAGTCTGTCTCCACCATGTGGCGCACTG
CTGCATGAAGAGGTTTCGAAAGGAGAGCTTGGGCTCCAAAGACTTGGTAG
TGTTGACCAAATTCATTTCGGCTGAAGGTAGACGGTGGTTGATGTTCTAC
GTCAGGGTTTCCATCTTCACGGGGTTTTCCCGCCTTCCCTGCTTCCAACA
AGTAAACTCCTTTGAGGGCGGGGGTTAACTCATCACTTGTGGCAAGTTTA
GCCCATGACTGCCCAACAGCTTTTTCAAGCTTGTCTTTGGTGATGATTTC
CTCTAGCTTCTTCAGCGAGTCAATCAGAGCCAATCCTGTCGGTAGCTGGG
CAAGCCGGGGTAGACATTGCTCAACTGTGTATCCTGTCGATGCTTGCACT
GACTTGGAGAACACCAGCGCTTGCCCTGCCACAAAAGCCGATTCTCGAAT
GAGAACATTGCTCGTGATTCCTAGTCCTCCTTCTCGCATGGGTAGGTGCA
CCTGCGCTCGAGCTGTCCCTTTGAAGAAATCTACCTCCTCGCTCTTCGTC
GGGTCTGCGCGTACCTCTTTGACCGTTGGTATTCTCATGCTGTCGGCCAT
CTTGCCAAGGACGATCTTACTCATTGCCCACATCATCATGTTGTCATGTA
TTTTTGCGGCAGAGTTGGTGATAGACGGTGCAATCGTCCTCAGCAGATGG
AACAAACGTGGCACACCAGATGAACACAGCAGTTGATAGCTGACTTGGGG
GTCGTCAATCGTTGCTAGGCGGAGTATCAATTCCGCCGGGTCACCACGGG
CGATTTTGGAAACGAAATTCCTCTGGAACTCTTCTGTTCCTACTGGGATC
CCGACAACTGGGATGCCACCTTCAGCAACTGACAGACCAATTTTCGTCAA
TTGTTGCTGTTCGTCGTTTGTCAAAGAGGACGTGCAAAGACCTTCGGGGA
AAAGCACTTTGGATTTCGGGAGACTGAGCTCAATT
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Coding sequence (CDS) from alignment at Scaffold_373:269019..271253-

>EsuBft446_2a-0001 ID=EsuBft446_2a-0001|Name=EsuBft446_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=150bp|location=Sequence derived from alignment at Scaffold_373:269019..271253- (Ectocarpus subulatus male Bft15b)
ATGTTTTCGTGCTCCGTCGTCGTCTTCGTCCTCCTTTCTTTCCTTTCCCT
TTCCATCGCCTTCGTCACTCCCAAAAGAATTACCCTCACTACTATCGTTG
TCGCAGAGGTCCCAACCGATTGGCCCTGGTGGAAGTTGGTCGATCAGTAG
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