Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 159749.K0T4Q0 |
| ProteomeId | EsuBft2083_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 202 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.63e-21 |
| EggNOG OGs | 2D06V@1|root,2SD1E@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2083_2a-0001 ID=EsuBft2083_2a-0001|Name=EsuBft2083_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2028bp|location=Sequence derived from alignment at Scaffold_373:12868..15905+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ACAGCATATAGGGACATCTCCCCTGCGGGTAACAGGCTCAACAAATCAGT
TTGGTAGCTGTCTTGTGTGTCTCATATATGTTTTGTTGGGAAGGTGCAGA
CGAGAGGTGTTGGGTACTGTTGGTTAGTCGGGCGTTTTGTGTGTGGCACC
CTGTTAGTTGTAGGATATACAGTCTCCATCAGTTTACATACGTGTTTTCA
GTTTGGTATGCATATGTGCGGAGTATGTGCGGCTGATGTGCGGGCACACG
GGAGTGGAAAATCGCTCAACAGCCTCGGGATCATCGGCCGACCACAGGAA
CGGCAGTTCAAGCGACAGCGGCGGGCTGGCTCCGACGCGACCCGCGCGGA
ATTTGCGATGCAGCAGATGCTCACCAGCCGCGAAAAACGCTCGATAGAGC
GGGGCAAGGATGGGTACTGGGGCTACGACCAGTTCGAAGAACAGGTCGAA
GACGTGATGGACGTCTTGGAGCACATCGATCCCGACATGCAAATAGTGTT
CGAGGTCGACCACTCGTCGGGCCATGGGAAGCAGCGAGAGGATGGTTTGC
ATGTATCGAACATGAACGTCAAGTATGGGGGGAAGCAAAAGGTGTTGCGG
GATTCGGTCATGACGGAGGAGTGCTTGGGTCCGGAGGAGGCGAAAATGTA
TTTCGCCAACGGCAGGTGGAGCACGAAGTTCAGCGAGGGGGCAGTGTGTG
TTGACCAGAAGCTGACGGTGGGCCAGACTCAGACTAGCACTTTCGCGGTA
TGTGCGCCTCCTCCGTTTTTCGAATGGCACGCTCCGCGCAAAGACAAGAA
GAACGCGAAGGGGAAGGTCAAGGAAGGGTACGAGGGGAAAGCGAAAGGGG
TCAGGCAGTACCTGTGGGAGCGTGGGTGGTGGAAGGACGGCATGTCAACA
GGGGCGGGAGTCAGTGACGATATGCACGTGGAAAAGGTTCTGCAAGCCTT
GCCTGACTTTAAGAATGAGAGGACAGCCCTGCAGCACCTGGTAGAGAGTA
GGGGACACATTCTTTTGTCGTCTCCGAAGTGTCACCCGGAGGTAGCGGGG
GTAGGGATCGAGTACTCGTGGGGGTTTTCCAAGCAGAAGTTTCGGCGGAA
GATCAATGATGAGGTCCCGAAGCACTTGCACGACAACATCGAAGAGTCGC
TGTGCATACACAAGTACTTGACAATCGGTCGGGTGCGGCGCTTTGCCCGG
CGAACACGAGACTACTGCCGGGCTTACCGCGAGATTGCGCTTCGCGGGGT
AGTCATCAGGAACAAGGAGTTCATCGAGAAGATGCGCAAGATCCAAAAGG
CCCACCGCAACATGTTGGACATGGAAACTAGTTTTCTTGGCTTCCAGTAA
CAACGTCAGCCGGCCGATGGCGAGGGGGGGGGGTCTCGAGTTGTGTGTGC
GTGTTTTGTTTTTTTCTGCGAGATAAACGGGTGTGGCGGGGGTGTGTTTA
TATGAGTCGGTTTCAAGCTGTAGTTTGCATCATTTTTTTCGGTAAGATTA
ACCGGTGCGAGAAGTTGTGTGTGTGTGTTGATGAGTCTTTCAGTTTGAAT
GTTGTTTGTAGATAAGCGGGTATTTTTTAACCGCTGTCAATCAACGAAGT
GTTTTTTTTTTTGTACAAGGAAATGTCAACTTTTGTGCGATTTGTGCAAA
ACATTTGTCATGCGTTTTTGGAGCGCTTACCTTCAGATTACAACCTCTTG
CATGTATGTGTGTCACGTCATTACGATCGATAAGCACCCATACCTACCTG
TCCAACCAAAGGGGTACAGTCAGCATCTGTGCACCTCTTGCCATCAGGCC
GCTTTCGCGCCCCTTTTCTCGGGCTGTGAGGCCTTCATTTTCCTACACAA
TTTCCGCCCCTGCACCCAGGTATCGAGGTCATTACGCAATTTGCTATTTC
CGAGCCGGTTTCCACGAACTAGAAGCTGAAATTTTGATATGTGATTGGGA
GTGGTCTTACAAATGCCCCCGAGTCAGGTGCCGTTTTTTTTTTTTTTAAG
CAACAAAAACCCGTATGTTAGGATTCTC back to topprotein sequence of EsuBft2083_2a-0001 >EsuBft2083_2 ID=EsuBft2083_2|Name=EsuBft2083_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=380bp
MHMCGVCAADVRAHGSGKSLNSLGIIGRPQERQFKRQRRAGSDATRAEFA
MQQMLTSREKRSIERGKDGYWGYDQFEEQVEDVMDVLEHIDPDMQIVFEV
DHSSGHGKQREDGLHVSNMNVKYGGKQKVLRDSVMTEECLGPEEAKMYFA
NGRWSTKFSEGAVCVDQKLTVGQTQTSTFAVCAPPPFFEWHAPRKDKKNA
KGKVKEGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVEKVLQALPD
FKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKIN
DEVPKHLHDNIEESLCIHKYLTIGRVRRFARRTRDYCRAYREIALRGVVI
RNKEFIEKMRKIQKAHRNMLDMETSFLGFQ back to topmRNA from alignment at Scaffold_373:12868..15905+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2083_2a-0001 ID=EsuBft2083_2a-0001|Name=EsuBft2083_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3038bp|location=Sequence derived from alignment at Scaffold_373:12868..15905+ (Ectocarpus subulatus male Bft15b)
ACAGCATATAGGGACATCTCCCCTGCGGGTAACAGGCTCAACAAATCAGT
TTGGTAGCTGTCTTGTGTGTCTCATATATGTTTTGTTGGGAAGGTGCAGA
CGAGAGGTGTTGGGTACTGTTGGTTAGTCGGGCGTTTTGTGTGTGGCACC
CTGTTAGTTGTAGGATATACAGTCTCCATCAGTTTACATACGTGTTTTCA
GTTTGGTATGCATATGTGCGGAGTATGTGCGGCTGATGTGCGGGCACACG
GGAGTGGTGTCACCGTATATAAAAAAAAAAAGATTTTTGAATTTTCGACG
GCATGCTTCGTACGCACAAGTGTAATCGCCCAACGTGATATCCACGTCCA
CATGAGTTGCCTTCATTACTCGTCTGTTGTTCTGGTACTAGAGACGCCTA
CAGCAGTACGCACAACGTGTTTTGCTACAATATGGTACCTGTACACCCCG
ATGTGTTTGCTGCAACCATGTGCTGCCGTATATGACACAAGATAACACAC
GCCCCTGGACGGATTTTGAAAGCTCGATTCATCACCAGCAGAACGAGTCG
CAGCGCCGAAAACGGCGGTGTTGAAGCCGTCTTGTCGAGACCTCTCCGGA
AACGTATCGTGTCGTTCATGCATCCTCTTCGTCGTGGAGTAATCGAGCTG
TGGAAATCGACCCAGGGGGTGTGTTATCATGTGTCGTACTTCGGTCTGAA
AGTAAAACTCTGCATGAAAATGCGCCGATGTCGTCACACTTTCGCGAAAG
GTTGACCGGTTGTTGCACCTCTGCACATCATGTACTACTTGGGTGATCTC
CAACTCTAAAGTACTTGCTGCAAGTACTGCTGTAGTGCAAAACAACGAAT
AACAATGTGCCGCATTGCCTCGTGCTTCAAACTCCCAACCGCCGCTCATG
CAGGAAAATCGCTCAACAGCCTCGGGATCATCGGCCGACCACAGGAACGG
CAGTTCAAGCGACAGCGGCGGGCTGGCTCCGACGCGACCCGCGCGGAATT
TGCGATGCAGCAGATGCTCACCAGCCGCGAAAAACGCTCGATAGAGCGGG
GTTGGAGAAGGAGAGACAGAAAGCTTCGAAAGGCCTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGACCCGCGCGGAATTTTCGATGCAGCAGATGCTCA
CCAGCCGCGAAAAACGCTCGATAGAGCGGGGCTGGAGAAGGAGAGACAGA
AAGCTTCGAAAGGCCTAGGCCTACCTCAGCGGCCGGATCAAAGACTTGAC
GGCAAACGTTGCAGCCAACGAGCAACACATCAAGCGTCTCCAGGACGCCC
TCCGGACTNAAAGGCAAGGATGGGTACTGGGGCTACGACCAGTTCGAAGA
ACAGGTCGAAGACGTGATGGACGTCTTGGAGCACATCGATCCCGACATGC
AAATAGTGTTCGAGGTCGACCACTCGTCGGGCCATGGGAAGCAGCGAGAG
GATGGTTTGCATGTATCGAACATGAACGTCAAGTATGGGGGGAAGCAAAA
GGTGTTGCGGGATTCGGTCATGACGGAGGAGTGCTTGGGTCCGGAGGAGG
CGAAAATGTATTTCGCCAACGGCAGGTGGAGCACGAAGTTCAGCGAGGGG
GCAGTGTGTGTTGACCAGAAGCTGACGGTGGGCCAGACTCAGACTAGCAC
TTTCGCGGTATGTGCGCCTCCTCCGTTTTTCGAATGGCACGCTCCGCGCA
AAGACAAGAAGAACGCGAAGGGGAAGGTCAAGGAAGGGTACGAGGGGAAA
GCGAAAGGGGTCAGGCAGTACCTGTGGGAGCGTGGGTGGTGGAAGGACGG
CATGTCAACAGGGGCGGGAGTCAGTGACGATATGCACGTGGAAAAGGTTC
TGCAAGCCTTGCCTGACTTTAAGAATGAGAGGACAGCCCTGCAGCACCTG
GTAGAGAGTAGGGGACACATTCTTTTGTCGTCTCCGAAGTGTCACCCGGA
GGTAGCGGGGGTAGGGATCGAGTACTCGTGGGGGTTTTCCAAGCAGAAGT
TTCGGCGGAAGATCAATGATGAGGTCCCGAAGCACTTGCACGACAACATC
GAAGAGTCGCTGTGCATACACAAGTACTTGACAATCGGTCGGGTGCGGCG
CTTTGCCCGGCGAACACGAGACTACTGCCGGGCTTACCGCGAGATTGCGC
TTCGCGGGGTAGTCATCAGGAACAAGGAGTTCATCGAGAAGATGCGCAAG
ATCCAAAAGGCCCACCGCAACATGTTGGACATGGAAACTAGTTTTCTTGG
CTTCCAGTAACAACGTCAGCCGGCCGATGGCGAGGGGGGGGGGTCTCGAG
TTGTGTGTGCGTGTTTTGTTTTTTTCTGCGAGATAAACGGGTGTGGCGGG
GGTGTGTTTATATGAGTCGGTTTCAAGCTGTAGTTTGCATCATTTTTTTC
GGTAAGATTAACCGGTGCGAGAAGTTGTGTGTGTGTGTTGATGAGTCTTT
CAGTTTGAATGTTGTTTGTAGATAAGCGGGTATTTTTTAACCGCTGTCAA
TCAACGAAGTGTTTTTTTTTTTGTACAAGGAAATGTCAACTTTTGTGCGA
TTTGTGCAAAACATTTGTCATGCGTTTTTGGAGCGCTTACCTTCAGATTA
CAACCTCTTGCATGTATGTGTGTCACGTCATTACGATCGATAAGCACCCA
TACCTACCTGTCCAACCAAAGGGGTACAGTCAGCATCTGTGCACCTCTTG
CCATCAGGCCGCTTTCGCGCCCCTTTTCTCGGGCTGTGAGGCCTTCATTT
TCCTACACAATTTCCGCCCCTGCACCCAGGTATCGAGGTCATTACGCAAT
TTGCTATTTCCGAGCCGGTTTCCACGAACTAGAAGCTGAAATTTTGATAT
GTGATTGGGAGTGGTCTTACAAATGCCCCCGAGTCAGGTGCCGTTTTTTT
TTTTTTTAAGCAACAAAAACCCGTATGTTAGGATTCTC back to topCoding sequence (CDS) from alignment at Scaffold_373:12868..15905+ >EsuBft2083_2a-0001 ID=EsuBft2083_2a-0001|Name=EsuBft2083_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1143bp|location=Sequence derived from alignment at Scaffold_373:12868..15905+ (Ectocarpus subulatus male Bft15b)
ATGCATATGTGCGGAGTATGTGCGGCTGATGTGCGGGCACACGGGAGTGG
AAAATCGCTCAACAGCCTCGGGATCATCGGCCGACCACAGGAACGGCAGT
TCAAGCGACAGCGGCGGGCTGGCTCCGACGCGACCCGCGCGGAATTTGCG
ATGCAGCAGATGCTCACCAGCCGCGAAAAACGCTCGATAGAGCGGGGCAA
GGATGGGTACTGGGGCTACGACCAGTTCGAAGAACAGGTCGAAGACGTGA
TGGACGTCTTGGAGCACATCGATCCCGACATGCAAATAGTGTTCGAGGTC
GACCACTCGTCGGGCCATGGGAAGCAGCGAGAGGATGGTTTGCATGTATC
GAACATGAACGTCAAGTATGGGGGGAAGCAAAAGGTGTTGCGGGATTCGG
TCATGACGGAGGAGTGCTTGGGTCCGGAGGAGGCGAAAATGTATTTCGCC
AACGGCAGGTGGAGCACGAAGTTCAGCGAGGGGGCAGTGTGTGTTGACCA
GAAGCTGACGGTGGGCCAGACTCAGACTAGCACTTTCGCGGTATGTGCGC
CTCCTCCGTTTTTCGAATGGCACGCTCCGCGCAAAGACAAGAAGAACGCG
AAGGGGAAGGTCAAGGAAGGGTACGAGGGGAAAGCGAAAGGGGTCAGGCA
GTACCTGTGGGAGCGTGGGTGGTGGAAGGACGGCATGTCAACAGGGGCGG
GAGTCAGTGACGATATGCACGTGGAAAAGGTTCTGCAAGCCTTGCCTGAC
TTTAAGAATGAGAGGACAGCCCTGCAGCACCTGGTAGAGAGTAGGGGACA
CATTCTTTTGTCGTCTCCGAAGTGTCACCCGGAGGTAGCGGGGGTAGGGA
TCGAGTACTCGTGGGGGTTTTCCAAGCAGAAGTTTCGGCGGAAGATCAAT
GATGAGGTCCCGAAGCACTTGCACGACAACATCGAAGAGTCGCTGTGCAT
ACACAAGTACTTGACAATCGGTCGGGTGCGGCGCTTTGCCCGGCGAACAC
GAGACTACTGCCGGGCTTACCGCGAGATTGCGCTTCGCGGGGTAGTCATC
AGGAACAAGGAGTTCATCGAGAAGATGCGCAAGATCCAAAAGGCCCACCG
CAACATGTTGGACATGGAAACTAGTTTTCTTGGCTTCCAGTAA back to top
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