Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft982_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 103 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft982_8a-0001 ID=EsuBft982_8a-0001|Name=EsuBft982_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1031bp|location=Sequence derived from alignment at Scaffold_360:355573..357340- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GACTATTATGGTGGGCGCGGATCCGCTGCTGCGTCCCACAGGAGATGCAG
TCTACCCGTGGCACATCATGTTGCATCATGCTAGAAGGGGTTACCCGCAG
CCGTTACTTCTCCTGCATCCCGCTGTAGCCACAGTAGATGCAGTCTACCC
GAAAGAATTTCGAAACAACTACTGCGAAGCACCGCGGACCCGGTGCAGTT
GACACTCTGCGCAATAGCCATTCCGTGCGCTGCAAGACGGCCGGTGTTCA
CGGACTCGTTTAGTGGCGAGACCTATGCTCCCTCCTCTACTCAAAACGCA
CATGTATCTGGTGTAAAAAATGGAGCCGAAGCAAGTCCCCACTACGACAT
TCAATGGCGCTCCCACCCTTGTCCTCTACAGGTCTGCAGAACGTAGTGTT
GAAAGTGAATGGGAGCGGGCGTTCGGTCGGCGAAAGGTGGGACACCTGCT
GGAAGACTCTCAACCAGGAGCCCCTGGTCAGGCTGTTCAAGGATAAGACT
TCCAAAAATTGCAAGTCGCGCTACGACAAGATCGTTGACGACCAGAGCAA
GAGCGATGGTAAAGCCCTGCGAGACTCCGGAGCCGGCACTGCTGAGAGTG
ACGCGGAGGACGAAGTAGAGAAGAATACCAAGGTCCAGCTGGACAAAGTT
CTGACCGCGATAGTGGACGCCAAGGCTGCCGCGAGGCAGGACTCGGAGGA
GACCAAGCAGAAGCAAGCCGACGAGGCGGCCTCGCACTCCGCGATGAGGA
TGTGGGCCATCAACCAGGGCAACGCCCGATGCGGGCCGGGCGCGAAGGCT
ACATCATTCCAAGAAGCTGTTGCCGCCGACAACATCGCGTTGGGTTCCCG
CTCCGGTGCAGTGGACGGTGGCCGTGCCAGCGGTCGGGTGAGTCCGGCCA
GCAGCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGGTGGCGCT
GCCAGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGCTAGACGACGAC
TTATCGCCCGCGGGGAGCGGGCCATCGAGGA back to topprotein sequence of EsuBft982_8a-0001 >EsuBft982_8 ID=EsuBft982_8|Name=EsuBft982_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=212bp
MALPPLSSTGLQNVVLKVNGSGRSVGERWDTCWKTLNQEPLVRLFKDKTS
KNCKSRYDKIVDDQSKSDGKALRDSGAGTAESDAEDEVEKNTKVQLDKVL
TAIVDAKAAARQDSEETKQKQADEAASHSAMRMWAINQGNARCGPGAKAT
SFQEAVAADNIALGSRSGAVDGGRASGRVSPASSIGGARPASEASAGGAA
SGRSSPTMSTGG back to topmRNA from alignment at Scaffold_360:355573..357340- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft982_8a-0001 ID=EsuBft982_8a-0001|Name=EsuBft982_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1768bp|location=Sequence derived from alignment at Scaffold_360:355573..357340- (Ectocarpus subulatus male Bft15b)
GACTATTATGGTGGGCGCGGATCCGCTGCTGCGTCCCACAGGAGATGCAG
TCTACCCGTGGCACATCATGTTGCATCATGCTAGAAGGGGTTACCCGCAG
CGTTACTTCTCCTGCATCCCGCTGTAGCCACAGTAGATGCAGTCTACCCG
TGGCACATCATGTTGCATCATGCTAGAAGGGGTTACCCGCAGCGTTACTT
CTCCTGCATCCCGCTGTAGCCACAGTAGATGCAGTCTACCCGTGGCACAT
CATGTTGCATCATGCTAGAAGGGGTTACCCGCAGCGTTACTTCTCCTGCA
TCCCGCTGTAGCCACAGTAGATGCAGTCTACCCGAAAGAATTTCGAAACA
ACTACTGCGAAGCACCGCGGACCCGGTGCAGTTGACACTCTGCGCAATAG
CCATTCCGTGCGCTGCAAGACGGCCGGTGTTCACGGACTCGTTTAGTGGC
GAGACCTATGCTCCCTCCTCTACTCAAAACGCACATGTATCTGGTGTAAA
AAATGGAGCCGAAGCAAGTCCCCACTACGACATTCAATGGCGCTCCCACC
CTTGTCCTCTACAGGTCTGCAGAACGTAGTGTTGAAAGTGAATGGGAGCG
GGCGTTCGGTCGGCGAAAGGTGGGACACCTGCTGGAAGACTCTCAACCAG
GAGCCCCTGGTCAGGCTGTTCAAGGATAAGACTTCCAAAAATTGCAAGTC
GCGCTACGACAAGATCGTTGACGACCAGAGCAAGAGCGATGGTAAAGCCC
TGCGAGACTCCGGAGCCGGCACTGCTGAGAGTGACGCGGAGGACGAAGTA
GAGAAGAATACCAAGGTCCAGCTGGTGAGGGGTCTAGAGCCAGTAAGCTA
TCTCTACCTTTTGTGACGGGCGCAAGCCTGAGTGTACACGATCATGGCAC
AGTCTAAACAAGACGGGCACAAATATCTGCACATGGAGAATCCACAATCC
ATAGGGTATCGTGAAACACCTGCGCTGTCCCGACCGAAGAAAATGCCTGC
CGTCGTCACCAACGTTACACTTGCAGAGAAGAGGGGTACGCACAGGGTTA
GCTGTAAGTCCAACTTAAAATGCGCAGCATGACAAAATAAAGACAGAGGT
AGATAGACAGCATGAAAGTTCGAGTGCTACACGCCAGGCGACGCAAAACG
TGCAGAGTTAGCTTGCTGAGACGGTCCTTCAACCACAAAATAAAAACAGC
GTCGAGGTTTTCACTCCCACTCTGTATTGTTTAGGGGCGTGACGTAGCAG
TGTTGACACGGAAGTACAAAACAGACGATGCATATAGCTATCGCCGACGC
TAGTGATGCACTTTGTAAGTCGTAGAGCTGACGAGATGCCGCGCCGCTGT
TGCTTCTTGTCCGCGATGTGCCGCACAGGACAAAGTTCTGACCGCGATAG
TGGACGCCAAGGCTGCCGCGAGGCAGGACTCGGAGGAGACCAAGCAGAAG
CAAGCCGACGAGGCGGCCTCGCACTCCGCGATGAGGATGTGGGCCATCAA
CCAGGGCAACGCCCGATGCGGGCCGGGCGCGAAGGCTACATCATTCCAAG
AAGCTGTTGCCGCCGACAACATCGCGTTGGGTTCCCGCTCCGGTGCAGTG
GACGGTGGCCGTGCCAGCGGTCGGGTGAGTCCGGCCAGCAGCATCGGGGG
GGCGAGGCCCGCGTCGGAGGCTTCGGCGGGTGGCGCTGCCAGCGGTCGAT
CGAGCCCGACCATGAGTACGGGCGGCTAGACGACGACTTATCGCCCGCGG
GGAGCGGGCCATCGAGGA back to topCoding sequence (CDS) from alignment at Scaffold_360:355573..357340- >EsuBft982_8a-0001 ID=EsuBft982_8a-0001|Name=EsuBft982_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=639bp|location=Sequence derived from alignment at Scaffold_360:355573..357340- (Ectocarpus subulatus male Bft15b)
ATGGCGCTCCCACCCTTGTCCTCTACAGGTCTGCAGAACGTAGTGTTGAA
AGTGAATGGGAGCGGGCGTTCGGTCGGCGAAAGGTGGGACACCTGCTGGA
AGACTCTCAACCAGGAGCCCCTGGTCAGGCTGTTCAAGGATAAGACTTCC
AAAAATTGCAAGTCGCGCTACGACAAGATCGTTGACGACCAGAGCAAGAG
CGATGGTAAAGCCCTGCGAGACTCCGGAGCCGGCACTGCTGAGAGTGACG
CGGAGGACGAAGTAGAGAAGAATACCAAGGTCCAGCTGGACAAAGTTCTG
ACCGCGATAGTGGACGCCAAGGCTGCCGCGAGGCAGGACTCGGAGGAGAC
CAAGCAGAAGCAAGCCGACGAGGCGGCCTCGCACTCCGCGATGAGGATGT
GGGCCATCAACCAGGGCAACGCCCGATGCGGGCCGGGCGCGAAGGCTACA
TCATTCCAAGAAGCTGTTGCCGCCGACAACATCGCGTTGGGTTCCCGCTC
CGGTGCAGTGGACGGTGGCCGTGCCAGCGGTCGGGTGAGTCCGGCCAGCA
GCATCGGGGGGGCGAGGCCCGCGTCGGAGGCTTCGGCGGGTGGCGCTGCC
AGCGGTCGATCGAGCCCGACCATGAGTACGGGCGGCTAG back to top
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