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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FUY1 |
| ProteomeId | EsuBft207_11 |
| Protein domains | IPR004143 |
| Protein domains | SSF55681 |
| Protein domains | G3DSA |
| Protein domains | IPR020605 |
| Protein domains | IPR000544 |
| Protein domains | PTHR10993 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | octanoyltransferase os:synechococcus (strain atcc 27144 pcc 6301 saug 1402 1) gn:lipb pe:3 sv:1 [Automatic annotation] |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1389 |
| Hectar predicted targeting category | other localisation |
| Evalue | 9.03e-184 |
| EggNOG OGs | COG0321@1|root,KOG0325@2759|Eukaryota |
| Ec32 ortholog description | Lipoyl-[acyl-carrier-protein]-protein-N-lipoyltransferase (Lipoate-protein ligase B) |
| Ec32 ortholog | Ec-01_008620.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00039,RC00992,RC02867 |
| KEGG ko | ko:K03801 |
| KEGG Reaction | R07766,R07769 |
| KEGG Pathway | ko00785,ko01100,map00785,map01100 |
| EC | 2.3.1.181 |
| Description | octanoyl transferase activity (acting on glycine-cleavage complex H protein) |
| COG category | H |
| BRITE | ko00000,ko00001,ko01000 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0016415 |
| GO | 0009107 |
| GO | 0005737 |
| GO | 0004571 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft207_11a-0001 ID=EsuBft207_11a-0001|Name=EsuBft207_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1389bp|location=Sequence derived from alignment at Scaffold_358:250386..252189+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTGCACAGCAGCGTGCAGCGGGTCCGGGTTCTCAGTTACTGCTGCTTGTG
TGTTTTTCTCATGTGGCATAGAGCGTGTCACAGCTTGCAGCGGCAGAGAA
ACCGGCTGTCACCTCAGGCACTGCCACCGCCGGCACGAGCACCATCAATC
TCGTCAATATCTCACCAACAGAGGCGGCGGCACCCGGTTGACACTCGAGT
TAGCAGCCGGAGGTGCCTTGTAGGGACATCAACACCACCACCACCACCAC
CACCACCACTATCACCACCACCACCACCTCGCAGGTGCCTCGTGTACAAC
ATCACAGGTGGTACCGTCCCTTACGACCGGGCATGGCTGTGGCAGCAGCG
CCTGCTGCACGAGCGCATGGCCTGGCAGCGAGAGGAATCTCCAAGCCAGG
ACTCGCACGACGTCCTTCTCATGCTCGAACACCCTCCCGTCTACACGCTC
GGGCGGGGCTCGTCCCTGGACCACCTGCGCTTCGACCCGACGGACCCTTC
GTCTCTGGACGGGAGAGAAGTCCGCCGGACGGAGAGGGGAGGCGAGGTGA
CCTGGCACGGTCCAGGGCAGGTGGTGGGGTATCCTGTGCTGGACCTCAAC
TTTCACAACAAGGACTTGCACTGGTACATGAGGCAACTGGAAGAGGTTGT
CATCCGAGTGCTCGGGAGATATGGCCTCGAGGGCGAGCGAGAAACGGAAC
ACACGGGCGTGTGGGTGGGCGGCGCCAAGGTCGCGGCCATCGGGCTGAAC
GCCAGCCGCTGGGTCACCTCGCACGGCTTCGCGCTCAACGTCAACCCGGA
CCTGAGCGCCTTCGAGGCTATCGTGCCTTGCGGCATCCAGGGTCGGCCTG
TCACGAGGCTGTGCGACCTCGTTGGTACCGAGACCTGGTTTCCGCCCTCG
GCGGAACAAATCGAGAACGCGGCACGCGTCGATGGAACAGATGTCACTGC
TTCGAACGCCGCGGATAACCATGCGGTCGACATGGGCTCCGTTCGGTCGC
TCGTGATGCAGGAGTTCGAGGGCGTGTTCGGCTTGAGGATAGAAGTCGTA
GACGTTGACGCTGCAGCAGATGGTAGCGGTGACGACGACTTGGAAAGAGA
GATCTTCCCGGCAGACTGCGAGCCGCAGCTGCTGGCGCGCCTACAAGCCG
ATAGCTTGCGACAGTTAGAGCTGACGAGGCGATGACGGCGCTGACTGACT
CCAAATAGTTGTTGGTATTTATGGTGCCATCTCACGTGTGTGGAAGATAG
CATCATCCGCCGTGCTGCGACGCACATTCGAAAGGGGTTGGCGTCGGGCT
TCGCGCGCAAAGCCGGGGATCCATCCGTGAAGATCGTGCAGGCAGATACA
GAACAAGCATTGCATACTTTGGTCTTCAAGGGCCAGCGA back to topprotein sequence of EsuBft207_11a-0001 >EsuBft207_11 ID=EsuBft207_11|Name=EsuBft207_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=272bp
MAWQREESPSQDSHDVLLMLEHPPVYTLGRGSSLDHLRFDPTDPSSLDGR
EVRRTERGGEVTWHGPGQVVGYPVLDLNFHNKDLHWYMRQLEEVVIRVLG
RYGLEGERETEHTGVWVGGAKVAAIGLNASRWVTSHGFALNVNPDLSAFE
AIVPCGIQGRPVTRLCDLVGTETWFPPSAEQIENAARVDGTDVTASNAAD
NHAVDMGSVRSLVMQEFEGVFGLRIEVVDVDAAADGSGDDDLEREIFPAD
CEPQLLARLQADSLRQLELTRR back to topmRNA from alignment at Scaffold_358:250386..252189+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft207_11a-0001 ID=EsuBft207_11a-0001|Name=EsuBft207_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1804bp|location=Sequence derived from alignment at Scaffold_358:250386..252189+ (Ectocarpus subulatus male Bft15b)
GTGCACAGCAGCGTGCAGCGGGTCCGGGTTCTCAGTTACTGCTGCTTGTG
TGTTTTTCTCATGTGGCATAGAGCGTGTCACAGCTTGCAGCGGCAGAGAA
ACCGGCTGTCACCTCAGGCACTGCCACCGCCGGCACGAGCACCATCAATC
TCGTCAATATCTCACCAACAGAGGCGGCGGCACCCGGTTGACACTCGAGT
TAGCAGCCGGAGGTGCCTTGTAGGGACATCAACACCACCACCACCACCAC
CACCACCACTATCACCACCACCACCACCTCGCAGGTGCCTCGTGTACAAC
ATCACAGGTGGTACCGTCCCTTACGACCGGGCATGGCTGTGGCAGCAGCG
CCTGCTGCACGAGCGCATGGCCTGGCAGCGAGAGGAATCTCCAAGCCAGG
ACTCGCACGACGTCCTTCTCATGCTCGAACACCCTCCCGTCTACACGCTC
GGGCGGGGCTCGTCCCTGGACCACCTGCGCTTCGACCCGACGGACCCTTC
GTCTCTGGACGGGAGAGAAGTCCGCCGGACGGAGAGGGGAGGCGAGGTGA
CCTGGCACGGTCCAGGGCAGGTGGTGGGGTATCCTGTGCTGGACCTCAAC
TTTCACAACAAGGACTTGCACTGGTACATGAGGCAACTGGAAGAGGTGAT
GACTCCCGCGCGAGAGCTGCTGGGAACATGCTGGCTCTTTCGTGCACCAT
GGTATGGGCTGTCACCTTTCCATGCTCCTACTGTGTTGCGACTTGTTCTG
ATACGAACCCCGGCGTCACGTAGTATTTTCTGTAGCATATCTATTCTTGT
GCACCCCGCTACTGCTGTTGGCCCTCGTAGCGGCAGGATAAGGCTTGTGT
CGAGGTTGACCGTAAAGACATGCAGCAGCCACGCCCGTATCGACACAAGT
ACACCTGCGTTGTGACACGCACACCAAGAGTGCCTCCCAATTCCGCCCCC
TACCCTGCCTGTTGCATATCTGTTGCATTCGCACGCTTCCTCAATGTCCG
CGCACACCACTTTCGGCCCTCATCGTTTCTGGACCTTTAACGGTCGCTCA
ATACACAAAGGTTGTCATCCGAGTGCTCGGGAGATATGGCCTCGAGGGCG
AGCGAGAAACGGAACACACGGGCGTGTGGGTGGGCGGCGCCAAGGTCGCG
GCCATCGGGCTGAACGCCAGCCGCTGGGTCACCTCGCACGGCTTCGCGCT
CAACGTCAACCCGGACCTGAGCGCCTTCGAGGCTATCGTGCCTTGCGGCA
TCCAGGGTCGGCCTGTCACGAGGCTGTGCGACCTCGTTGGTACCGAGACC
TGGTTTCCGCCCTCGGCGGAACAAATCGAGAACGCGGCACGCGTCGATGG
AACAGATGTCACTGCTTCGAACGCCGCGGATAACCATGCGGTCGACATGG
GCTCCGTTCGGTCGCTCGTGATGCAGGAGTTCGAGGGCGTGTTCGGCTTG
AGGATAGAAGTCGTAGACGTTGACGCTGCAGCAGATGGTAGCGGTGACGA
CGACTTGGAAAGAGAGATCTTCCCGGCAGACTGCGAGCCGCAGCTGCTGG
CGCGCCTACAAGCCGATAGCTTGCGACAGTTAGAGCTGACGAGGCGATGA
CGGCGCTGACTGACTCCAAATAGTTGTTGGTATTTATGGTGCCATCTCAC
GTGTGTGGAAGATAGCATCATCCGCCGTGCTGCGACGCACATTCGAAAGG
GGTTGGCGTCGGGCTTCGCGCGCAAAGCCGGGGATCCATCCGTGAAGATC
GTGCAGGCAGATACAGAACAAGCATTGCATACTTTGGTCTTCAAGGGCCA
GCGA back to topCoding sequence (CDS) from alignment at Scaffold_358:250386..252189+ >EsuBft207_11a-0001 ID=EsuBft207_11a-0001|Name=EsuBft207_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=819bp|location=Sequence derived from alignment at Scaffold_358:250386..252189+ (Ectocarpus subulatus male Bft15b)
ATGGCCTGGCAGCGAGAGGAATCTCCAAGCCAGGACTCGCACGACGTCCT
TCTCATGCTCGAACACCCTCCCGTCTACACGCTCGGGCGGGGCTCGTCCC
TGGACCACCTGCGCTTCGACCCGACGGACCCTTCGTCTCTGGACGGGAGA
GAAGTCCGCCGGACGGAGAGGGGAGGCGAGGTGACCTGGCACGGTCCAGG
GCAGGTGGTGGGGTATCCTGTGCTGGACCTCAACTTTCACAACAAGGACT
TGCACTGGTACATGAGGCAACTGGAAGAGGTTGTCATCCGAGTGCTCGGG
AGATATGGCCTCGAGGGCGAGCGAGAAACGGAACACACGGGCGTGTGGGT
GGGCGGCGCCAAGGTCGCGGCCATCGGGCTGAACGCCAGCCGCTGGGTCA
CCTCGCACGGCTTCGCGCTCAACGTCAACCCGGACCTGAGCGCCTTCGAG
GCTATCGTGCCTTGCGGCATCCAGGGTCGGCCTGTCACGAGGCTGTGCGA
CCTCGTTGGTACCGAGACCTGGTTTCCGCCCTCGGCGGAACAAATCGAGA
ACGCGGCACGCGTCGATGGAACAGATGTCACTGCTTCGAACGCCGCGGAT
AACCATGCGGTCGACATGGGCTCCGTTCGGTCGCTCGTGATGCAGGAGTT
CGAGGGCGTGTTCGGCTTGAGGATAGAAGTCGTAGACGTTGACGCTGCAG
CAGATGGTAGCGGTGACGACGACTTGGAAAGAGAGATCTTCCCGGCAGAC
TGCGAGCCGCAGCTGCTGGCGCGCCTACAAGCCGATAGCTTGCGACAGTT
AGAGCTGACGAGGCGATGA back to top
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