Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft936_16 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 56 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft936_16a-0001 ID=EsuBft936_16a-0001|Name=EsuBft936_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=568bp|location=Sequence derived from alignment at Scaffold_350:127247..128327- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAAAGGGAATTGCTGCTTACACCGACCGCCTGGAGGCCCGCGCATCT
GCACCTTTGTACCTGGCGCACCAGTGCCGACCCAACTCCACCACTGCGCA
CGCCTCGCGGCGGGTGCGCCGCAGCAAGAAGGTATCGGTCCCTTGAGGGT
GAGTCTAGCCCTATTCGCTAGAAAGACCTCCCCCCCCCCTCTCGGTGTTT
GCCATCGAGGTTGGGTTTTCGTCGCTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCACAGGGGATGATCGCACCACGTTGTGTTAA
AATGGTCAAGCACCCTCG back to topprotein sequence of EsuBft936_16a-0001 >EsuBft936_16 ID=EsuBft936_16|Name=EsuBft936_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=56bp
MKRELLLTPTAWRPAHLHLCTWRTSADPTPPLRTPRGGCAAARRYRSLEG
ESSPIR back to topmRNA from alignment at Scaffold_350:127247..128327- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft936_16a-0001 ID=EsuBft936_16a-0001|Name=EsuBft936_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1081bp|location=Sequence derived from alignment at Scaffold_350:127247..128327- (Ectocarpus subulatus male Bft15b)
ATGAAAAGGGAATTGCTGCTTACACCGACCGCCTGGAGGCCCGCGCATCT
GCACCTTTGTACCTGGCGCACCAGTGCCGACCCAACTCCACCACTGCGCA
CGCCTCGCGGCGGGTGCGCCGCAGCAAGAAGGTATCGGTCCCTTGAGGGT
GAGTCTAGCCCTATTCGCTAGAAAGACCTCCCCCCCCCCTCTCGGTGTTT
GCCATCGAGGTTGGGTTTTCGTCGCTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCACAGTGCTTACAACTGTCTCTGGAAGTGAA
AGCACCAGAGAATAAATAAAGTCATACGCAGCTGTCATCCGAACGCAAGG
AAGTAAGCATAAGATGCCGAACTCCCTTAGCAGGATGCAGCGTACCCTTC
ATGCGACTCGCCGAATATCTCACGGCGCTTCGCGCTTGGTGATGTGAGAG
CCTGGTCCGGTGAGAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGGTTTTCGTCGCTTGGCAACGACGTTGTAAAAC
AAGCGAATTCACTTCGTGAACGCGGCAACCAGGTTACCGATTTTTTTTTT
TTCCTCCGTTTATTTTTTTTGGGCGGTAACCATAATGATGGTTGAGTAGA
TCATGTTGTGCGGGGTGAACCCTCACTCCGCGCAAGGGGGATGATCGCAC
CACGTTGTGTTAAAATGGTCAAGCACCCTCG back to topCoding sequence (CDS) from alignment at Scaffold_350:127247..128327- >EsuBft936_16a-0001 ID=EsuBft936_16a-0001|Name=EsuBft936_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=171bp|location=Sequence derived from alignment at Scaffold_350:127247..128327- (Ectocarpus subulatus male Bft15b)
ATGAAAAGGGAATTGCTGCTTACACCGACCGCCTGGAGGCCCGCGCATCT
GCACCTTTGTACCTGGCGCACCAGTGCCGACCCAACTCCACCACTGCGCA
CGCCTCGCGGCGGGTGCGCCGCAGCAAGAAGGTATCGGTCCCTTGAGGGT
GAGTCTAGCCCTATTCGCTAG back to top
|