Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft981_7 |
| Protein domains | SignalP-TM |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 47 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft981_7a-0001 ID=EsuBft981_7a-0001|Name=EsuBft981_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=470bp|location=Sequence derived from alignment at Scaffold_347:331680..333205- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
NGGTGCATAGCTTGCTGCTTCTGGGTTCCTTGCTTACCTCACTTGAAGCC
CTGCTTACATCTACAGGAGGGTTCCCCCCCACTTCCATCCGCTCGACGTG
GGCATCGTCATGCCCGCCCTGGACGTCTGCCGCCTCTCCCGAAGATGTGG
GCAGCAAGTCGTGGCAGCAGCAGCAACGGCAGTGCGAAGAGTCCACTCGA
GCGGAGGCTATCGATTCCGTCTGGAGGTCGGCTCTCACGGCAGGGGGTGG
GGCGGCCGTGGGGGCACGAGCGTTGCTAGCTTCTCCGCAGCCGGCCTCCG
GCGAAGCGGTAGCGGCAGGTGCGGTGGAGGGAGGGGAGGCGGCGTCGACG
CGGCGGGTTTCCTCGGCGATGGAAGGCTTGGAGCGCATCCCCTGGCGGGA
AGAAGGGTACCTGTCGTGGGAGTACGACGGGCACAAGATCAACTACGTTG
ACGAGGGGGACAAGAGTAAG back to topprotein sequence of EsuBft981_7a-0001 >EsuBft981_7 ID=EsuBft981_7|Name=EsuBft981_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=113bp
MPALDVCRLSRRCGQQVVAAAATAVRRVHSSGGYRFRLEVGSHGRGWGGR
GGTSVASFSAAGLRRSGSGRCGGGRGGGVDAAGFLGDGRLGAHPLAGRRV
PVVGVRRAQDQLR back to topmRNA from alignment at Scaffold_347:331680..333205- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft981_7a-0001 ID=EsuBft981_7a-0001|Name=EsuBft981_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1526bp|location=Sequence derived from alignment at Scaffold_347:331680..333205- (Ectocarpus subulatus male Bft15b)
NGGTGCATAGCTTGCTGCTTCTGGGTTCCTTGCTTACCTCACTTGAAGCC
CTGCTTACATCTACAGGAGGGTGAGTGCTTGCCGAGGGGCTTTTGCTACT
ACGGCGGGGATGTGGAAACAGTTACTCTGCTGCTGTAGTCCAAGTGCTGA
CGTCAACATGGTGTTTTTCCTTTTACACAGCAATGATCCTTCAGCGCATC
CTCAGGTTGATGCTGGTGAGTTCCGGCGGCAGACCTGTTCTGCTGGACAA
GCGTCCGTCTTGACGTGCGTCCAACATATTCTCGTATGGTGTTGCTTCCT
CACTTTCGTTGCATGACCGGCAGAGGGTGACACCTGAAGAGCCCAGGCAG
AGGTCGGCAGTGACACACACAACTCGTCTACTTGTACCCCCCCCTTGTGA
AAGGATCTCAGTCTGGCTCCCTGCTACCACTGCATTCTCTCTGAACGAAG
CGAAGTCACGAAAGACAGGAGTAGCTACTAGTGGGGTGTGGTTGATGACG
AACGGTTTTCTTGGAAGCTTCGGCCACGTGAGATCCCAGCCCGAACCCTG
CAGCAGTAGTCACCCCGACTTTATCTCTAGGTTTGTCTGTTTTGTCTCTC
CCCCCCCCCATGCAGCCGCCACCCACTCTACCGCCCCCACGCTCTCCCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCGGAGAAGGGTATATATA
TAGATGCCCACCCTTCGCCACCAAGACCTCTTGGTGTGGCAAGGTTGCCT
CCCTGAGGATAACCCCTTTAATTCCGCCTTAGAAATGACTGCTGACACTT
GTTGTCCAGCATCATCTGTCGCCTCCGCTCCCTCTCCCTGACAGACCGAA
CGAGCAGCTGTTGGTCGAAGGTGGTTTATTTTCGGCCCGTCGTCGATTTG
GTGTTATTCTTCGATTCCGTATCGGTTGAGGTGTTGCTGCTTTCTTAGCG
GACTATGCATAAATGTTCATATCGTTCCGTTCCTTTGTTCCTCATGGAAT
CATTTCGAAATCCCATCTCTGACGACACACTAGCCCATGATAAACTTCCG
GTGTCTTGCGTATGTGACCCCTCCAACATTCTTTGGGGCCCTTCTCGTGT
CTCTGCCAAAACATAAACCGGCACAGGTTCCCCCCCACTTCCATCCGCTC
GACGTGGGCATCGTCATGCCCGCCCTGGACGTCTGCCGCCTCTCCCGAAG
ATGTGGGCAGCAAGTCGTGGCAGCAGCAGCAACGGCAGTGCGAAGAGTCC
ACTCGAGCGGAGGCTATCGATTCCGTCTGGAGGTCGGCTCTCACGGCAGG
GGGTGGGGCGGCCGTGGGGGCACGAGCGTTGCTAGCTTCTCCGCAGCCGG
CCTCCGGCGAAGCGGTAGCGGCAGGTGCGGTGGAGGGAGGGGAGGCGGCG
TCGACGCGGCGGGTTTCCTCGGCGATGGAAGGCTTGGAGCGCATCCCCTG
GCGGGAAGAAGGGTACCTGTCGTGGGAGTACGACGGGCACAAGATCAACT
ACGTTGACGAGGGGGACAAGAGTAAG back to topCoding sequence (CDS) from alignment at Scaffold_347:331680..333205- >EsuBft981_7a-0001 ID=EsuBft981_7a-0001|Name=EsuBft981_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=342bp|location=Sequence derived from alignment at Scaffold_347:331680..333205- (Ectocarpus subulatus male Bft15b)
ATGCCCGCCCTGGACGTCTGCCGCCTCTCCCGAAGATGTGGGCAGCAAGT
CGTGGCAGCAGCAGCAACGGCAGTGCGAAGAGTCCACTCGAGCGGAGGCT
ATCGATTCCGTCTGGAGGTCGGCTCTCACGGCAGGGGGTGGGGCGGCCGT
GGGGGCACGAGCGTTGCTAGCTTCTCCGCAGCCGGCCTCCGGCGAAGCGG
TAGCGGCAGGTGCGGTGGAGGGAGGGGAGGCGGCGTCGACGCGGCGGGTT
TCCTCGGCGATGGAAGGCTTGGAGCGCATCCCCTGGCGGGAAGAAGGGTA
CCTGTCGTGGGAGTACGACGGGCACAAGATCAACTACGTTGA back to top
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