Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2505_2 |
| Protein domains | Coil |
| Protein domains | IPR001878 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 185 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2505_2a-0001 ID=EsuBft2505_2a-0001|Name=EsuBft2505_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1853bp|location=Sequence derived from alignment at Scaffold_347:214547..216399- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCAGGTCGCAAAAATGGGGGTGACTCCTCCAGCGACTCTGCGGCGGA
AGACAGAAAGAGGTCAAGAGAAGAGCTCGTGGTCCTGAGGACGCAAGTTA
GCTCGCTGACGGATCAGATGAGCCAGCTAATGTCGCTAGTGGAAGATACC
ATGAAGGCAAGCAAGAAGGAGGAGCCAGCTGGCACCATGGAGGGTGCCGC
TGATCGCGGCGATGCTAGGGAGAGCGCCGCCGCGGAGTCCACGAACGCCG
AAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACGGGAGGTACCTGCGC
GAACCTGTTCGAGAGTCTGGCCCGTCAGGGCGACACAGCGGCGAAGCAAG
GAGCGTTGTCGCCCAAGAGGTGAGAGTAGCCGCTGCTCACAATCAAGATT
ATAGTAGTGCCATGGGAGATGGTGGTGCTGCTGTTGGCTTGGGATACGGA
GCCACAACCCCAGCGACGGGGTACCAAAGTGTGCGGTACACTTCTCCTCC
GTTCAGCGGGAAATCGAAAGGTTTCAAAGAATGGCTAAATGATTTCCGCA
TGGCAGCTAATGGCGCAAACCTGTTGGGACAATTTGAAGAGAGCGGGAGC
TTAGAGATCCCCGTCAACAGCGGAAATAGCAAGTTTTCGCTGTCACAGCA
GCACCGGAGCGAGCAAGTAGAGCTCGCATTCCACGCGTGGAACTTCCTGT
CCCACGCGTTAAAAGAAAAATATCGGGAAATCATGAAGAGGGCAGAGACG
CCCCAGGGAGCTCTTCGTGAGCTCAAGACCATACACGACCCTGAATCATC
TGTACAGCCGTCAGAGGACCTCAAGTCCCTGACGTCGACCAAGATCTCTA
GAGGTGAAAACCCCCAAAACGACCTCAATGAAATGCTCCAAACCGCAAAG
TCCTTAACCGAGAAAGGACTAACTGTCAACGAAACGTTCGTCGTTCACCT
CTTCCTGGATGCCCTTTCAAACGAGTATGCTGTGACAAAGCACAACCTAC
GACACGCGAAGGAGTTGACGCGGACCGGTGTGCTAAAGGAAGTAATCATC
GAATACAAGGCGATCAAGGACAAGCTGGAGCAGGGGAAAGGAAATGGGGC
GAAGGGCGCAGAGCAAGCGTACTTCGCCGACGGTGAGGGCCGCAAGGAGC
GGTACTCAAGTAGGAGTCAGGGGCAAGGTCGTGGTCGTGGCGGCGGCCGT
GGCCGCAGCAGCAGTCGAGGCCGCGGCGGAGGCGGTCGCGGCGGCGGCGG
GGGCGGTCGCGGCGGCCGCTCAGGCGGATCCGGAGGAGTCGAGGAGAGCA
AGGGAAGCAGCAGTGGAGGCGCCGATGACGGCGGTGGCGGGGACTATAAG
TTCCCGGGCCGGTGCTTTAGGTGTGGACATCGTGGACATCAAGCGATCGG
CTGCACTACCGACGAGAAGGACTTCGTGCCGTGGTGTGCGCGCTGCGAGG
GGTGGGGCCACACCAAAGAAAAGTGTGCGACGGAGGAGGCCGTTCTAGCG
CAAGTGGTGGAGCATGAGAGCGACGTGGACCCCGTGGAAAACCAGGCGCT
TTGTGCCGTGGCAGTCCCCCCAGGCAAGTGTGGTACCGTTGGTGAAGTAG
GTCTAGTGGGGGTTGTAGAACAAGGCCAGGCGGTGTACGTGGCCGACACA
GCGGCCACGTGCTCCATGTTTCGGATGTGCAGACAACTTCGTGGACTACC
GTGAGCGTAGCGGTCGGGTGAAGGGGATCGGAGGCGACAAGGCCCCCGTT
CCTCTTCTAGGATACGGAGATGTGACCTTAGTCCTACAGACGGAAGATGG
TGGAGTACCCGTACCAGTACTGAATGCTGCCCATGTACCAGAGGCCCCCT
ACA back to topprotein sequence of EsuBft2505_2a-0001 >EsuBft2505_2 ID=EsuBft2505_2|Name=EsuBft2505_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=567bp
MSGRKNGGDSSSDSAAEDRKRSREELVVLRTQVSSLTDQMSQLMSLVEDT
MKASKKEEPAGTMEGAADRGDARESAAAESTNAEGGAPWTGSAQDGRYLR
EPVRESGPSGRHSGEARSVVAQEVRVAAAHNQDYSSAMGDGGAAVGLGYG
ATTPATGYQSVRYTSPPFSGKSKGFKEWLNDFRMAANGANLLGQFEESGS
LEIPVNSGNSKFSLSQQHRSEQVELAFHAWNFLSHALKEKYREIMKRAET
PQGALRELKTIHDPESSVQPSEDLKSLTSTKISRGENPQNDLNEMLQTAK
SLTEKGLTVNETFVVHLFLDALSNEYAVTKHNLRHAKELTRTGVLKEVII
EYKAIKDKLEQGKGNGAKGAEQAYFADGEGRKERYSSRSQGQGRGRGGGR
GRSSSRGRGGGGRGGGGGGRGGRSGGSGGVEESKGSSSGGADDGGGGDYK
FPGRCFRCGHRGHQAIGCTTDEKDFVPWCARCEGWGHTKEKCATEEAVLA
QVVEHESDVDPVENQALCAVAVPPGKCGTVGEVGLVGVVEQGQAVYVADT
AATCSMFRMCRQLRGLP back to topmRNA from alignment at Scaffold_347:214547..216399- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2505_2a-0001 ID=EsuBft2505_2a-0001|Name=EsuBft2505_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1853bp|location=Sequence derived from alignment at Scaffold_347:214547..216399- (Ectocarpus subulatus male Bft15b)
ATGTCAGGTCGCAAAAATGGGGGTGACTCCTCCAGCGACTCTGCGGCGGA
AGACAGAAAGAGGTCAAGAGAAGAGCTCGTGGTCCTGAGGACGCAAGTTA
GCTCGCTGACGGATCAGATGAGCCAGCTAATGTCGCTAGTGGAAGATACC
ATGAAGGCAAGCAAGAAGGAGGAGCCAGCTGGCACCATGGAGGGTGCCGC
TGATCGCGGCGATGCTAGGGAGAGCGCCGCCGCGGAGTCCACGAACGCCG
AAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACGGGAGGTACCTGCGC
GAACCTGTTCGAGAGTCTGGCCCGTCAGGGCGACACAGCGGCGAAGCAAG
GAGCGTTGTCGCCCAAGAGGTGAGAGTAGCCGCTGCTCACAATCAAGATT
ATAGTAGTGCCATGGGAGATGGTGGTGCTGCTGTTGGCTTGGGATACGGA
GCCACAACCCCAGCGACGGGGTACCAAAGTGTGCGGTACACTTCTCCTCC
GTTCAGCGGGAAATCGAAAGGTTTCAAAGAATGGCTAAATGATTTCCGCA
TGGCAGCTAATGGCGCAAACCTGTTGGGACAATTTGAAGAGAGCGGGAGC
TTAGAGATCCCCGTCAACAGCGGAAATAGCAAGTTTTCGCTGTCACAGCA
GCACCGGAGCGAGCAAGTAGAGCTCGCATTCCACGCGTGGAACTTCCTGT
CCCACGCGTTAAAAGAAAAATATCGGGAAATCATGAAGAGGGCAGAGACG
CCCCAGGGAGCTCTTCGTGAGCTCAAGACCATACACGACCCTGAATCATC
TGTACAGCCGTCAGAGGACCTCAAGTCCCTGACGTCGACCAAGATCTCTA
GAGGTGAAAACCCCCAAAACGACCTCAATGAAATGCTCCAAACCGCAAAG
TCCTTAACCGAGAAAGGACTAACTGTCAACGAAACGTTCGTCGTTCACCT
CTTCCTGGATGCCCTTTCAAACGAGTATGCTGTGACAAAGCACAACCTAC
GACACGCGAAGGAGTTGACGCGGACCGGTGTGCTAAAGGAAGTAATCATC
GAATACAAGGCGATCAAGGACAAGCTGGAGCAGGGGAAAGGAAATGGGGC
GAAGGGCGCAGAGCAAGCGTACTTCGCCGACGGTGAGGGCCGCAAGGAGC
GGTACTCAAGTAGGAGTCAGGGGCAAGGTCGTGGTCGTGGCGGCGGCCGT
GGCCGCAGCAGCAGTCGAGGCCGCGGCGGAGGCGGTCGCGGCGGCGGCGG
GGGCGGTCGCGGCGGCCGCTCAGGCGGATCCGGAGGAGTCGAGGAGAGCA
AGGGAAGCAGCAGTGGAGGCGCCGATGACGGCGGTGGCGGGGACTATAAG
TTCCCGGGCCGGTGCTTTAGGTGTGGACATCGTGGACATCAAGCGATCGG
CTGCACTACCGACGAGAAGGACTTCGTGCCGTGGTGTGCGCGCTGCGAGG
GGTGGGGCCACACCAAAGAAAAGTGTGCGACGGAGGAGGCCGTTCTAGCG
CAAGTGGTGGAGCATGAGAGCGACGTGGACCCCGTGGAAAACCAGGCGCT
TTGTGCCGTGGCAGTCCCCCCAGGCAAGTGTGGTACCGTTGGTGAAGTAG
GTCTAGTGGGGGTTGTAGAACAAGGCCAGGCGGTGTACGTGGCCGACACA
GCGGCCACGTGCTCCATGTTTCGGATGTGCAGACAACTTCGTGGACTACC
GTGAGCGTAGCGGTCGGGTGAAGGGGATCGGAGGCGACAAGGCCCCCGTT
CCTCTTCTAGGATACGGAGATGTGACCTTAGTCCTACAGACGGAAGATGG
TGGAGTACCCGTACCAGTACTGAATGCTGCCCATGTACCAGAGGCCCCCT
ACA back to topCoding sequence (CDS) from alignment at Scaffold_347:214547..216399- >EsuBft2505_2a-0001 ID=EsuBft2505_2a-0001|Name=EsuBft2505_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1704bp|location=Sequence derived from alignment at Scaffold_347:214547..216399- (Ectocarpus subulatus male Bft15b)
ATGTCAGGTCGCAAAAATGGGGGTGACTCCTCCAGCGACTCTGCGGCGGA
AGACAGAAAGAGGTCAAGAGAAGAGCTCGTGGTCCTGAGGACGCAAGTTA
GCTCGCTGACGGATCAGATGAGCCAGCTAATGTCGCTAGTGGAAGATACC
ATGAAGGCAAGCAAGAAGGAGGAGCCAGCTGGCACCATGGAGGGTGCCGC
TGATCGCGGCGATGCTAGGGAGAGCGCCGCCGCGGAGTCCACGAACGCCG
AAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACGGGAGGTACCTGCGC
GAACCTGTTCGAGAGTCTGGCCCGTCAGGGCGACACAGCGGCGAAGCAAG
GAGCGTTGTCGCCCAAGAGGTGAGAGTAGCCGCTGCTCACAATCAAGATT
ATAGTAGTGCCATGGGAGATGGTGGTGCTGCTGTTGGCTTGGGATACGGA
GCCACAACCCCAGCGACGGGGTACCAAAGTGTGCGGTACACTTCTCCTCC
GTTCAGCGGGAAATCGAAAGGTTTCAAAGAATGGCTAAATGATTTCCGCA
TGGCAGCTAATGGCGCAAACCTGTTGGGACAATTTGAAGAGAGCGGGAGC
TTAGAGATCCCCGTCAACAGCGGAAATAGCAAGTTTTCGCTGTCACAGCA
GCACCGGAGCGAGCAAGTAGAGCTCGCATTCCACGCGTGGAACTTCCTGT
CCCACGCGTTAAAAGAAAAATATCGGGAAATCATGAAGAGGGCAGAGACG
CCCCAGGGAGCTCTTCGTGAGCTCAAGACCATACACGACCCTGAATCATC
TGTACAGCCGTCAGAGGACCTCAAGTCCCTGACGTCGACCAAGATCTCTA
GAGGTGAAAACCCCCAAAACGACCTCAATGAAATGCTCCAAACCGCAAAG
TCCTTAACCGAGAAAGGACTAACTGTCAACGAAACGTTCGTCGTTCACCT
CTTCCTGGATGCCCTTTCAAACGAGTATGCTGTGACAAAGCACAACCTAC
GACACGCGAAGGAGTTGACGCGGACCGGTGTGCTAAAGGAAGTAATCATC
GAATACAAGGCGATCAAGGACAAGCTGGAGCAGGGGAAAGGAAATGGGGC
GAAGGGCGCAGAGCAAGCGTACTTCGCCGACGGTGAGGGCCGCAAGGAGC
GGTACTCAAGTAGGAGTCAGGGGCAAGGTCGTGGTCGTGGCGGCGGCCGT
GGCCGCAGCAGCAGTCGAGGCCGCGGCGGAGGCGGTCGCGGCGGCGGCGG
GGGCGGTCGCGGCGGCCGCTCAGGCGGATCCGGAGGAGTCGAGGAGAGCA
AGGGAAGCAGCAGTGGAGGCGCCGATGACGGCGGTGGCGGGGACTATAAG
TTCCCGGGCCGGTGCTTTAGGTGTGGACATCGTGGACATCAAGCGATCGG
CTGCACTACCGACGAGAAGGACTTCGTGCCGTGGTGTGCGCGCTGCGAGG
GGTGGGGCCACACCAAAGAAAAGTGTGCGACGGAGGAGGCCGTTCTAGCG
CAAGTGGTGGAGCATGAGAGCGACGTGGACCCCGTGGAAAACCAGGCGCT
TTGTGCCGTGGCAGTCCCCCCAGGCAAGTGTGGTACCGTTGGTGAAGTAG
GTCTAGTGGGGGTTGTAGAACAAGGCCAGGCGGTGTACGTGGCCGACACA
GCGGCCACGTGCTCCATGTTTCGGATGTGCAGACAACTTCGTGGACTACC
GTGA back to top
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