Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 946362.XP_004995034.1 |
| ProteomeId | EsuBft2505_3 |
| Protein domains | IPR013103 |
| Protein domains | PTHR11439 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | copia protein os:drosophila melanogaster gn:gip pe:1 sv:3 [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 33154|Opisthokonta |
| Length | 1477 |
| Hectar predicted targeting category | other localisation |
| Evalue | 7.37e-14 |
| EggNOG OGs | COG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Encoded by |
| COG category | J |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003824 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2505_3a-0001 ID=EsuBft2505_3a-0001|Name=EsuBft2505_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1477bp|location=Sequence derived from alignment at Scaffold_347:211699..214545- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCTCCTCTCGCTGTCTTCGTTGGCGGAGGAGGGCCACACGTATTCGGGGA
TGAAGGGGGGCCTCACGCTGACCACGAAAGCCGGGGGGGAGGTGTGGTTC
CCCCGGACTGGAAAGCTGCTGACCCAACGAGGCGATCAAATAAAGCCAAC
GCTACACACCACCTGTGCAGCACTCATTGTTCCTGGCGATGCGAAAGCAT
CCACCCCCACTGACCTCAACGAGTACGACCTCGCGCACGGCCATGCCCAC
GAGATATTGCTCAGGATCACGGTGGAGAAGCAGGGAGTGCAGCTGACGGA
TGGACCGCTGCTACCCTGTCTTGGCTGTTCGATGTCCAAGGGACAGGTGA
AACCCGTCCAGAAGAGCACGAGCACACGCGCACTGCTACCTCTCGCAGAT
GACGAGGAGGGCGGGGAGGGCGAGAGCAGAGCGGATGCATCACGCCAAGG
TTGGGGGGGGGAGAGAGACTCAGAGAGCGAGTCCGACCTCGACGTGATGG
AGGCTCGTGGGCCAGGGCAAGCGACGCCGTTTGTGCCCGAGGAGGCGCCG
ACGGCACCCGGCAACGGGATTCGGAGGCAGCGTTCCCCCGTCACCCCTTT
CGGGAAGGGGCGACTTCGGCGGAGTGACGCCGGCGGTGCTGGCGGCTCGG
GCGGCGAAGAGCCCGGCGACCCAGGTGGGGACGGCGGTAGCGGTGGTGAT
CCCGGCGACTCCGAGAACCTCGAGGAGTTGAAGTATGATCCAGCCGACGA
CCGCTACCCCCGCGGGCTAGAAGGGAAGAAACTCCTCTGGGGCGCCTCGA
ACGCTGGCCCGCTGCGCCATGGGCTTGAGAGTGGCCGCACGCGGAAGCAG
ACCCGGGAGATGCAAGGTGCCGGGGAGATGCCGGGGCCCGGAGAAACACC
GGACCCGGAAGAAGAACTGCTGGCGACCATCCTGGAAACTGGCGGGACGG
GGATTGTTGAGGACTACATCTGCAACTCGCTTGTGAAGGAGCAGTGGGAC
GAGGAGCAGACACGCCGAAAGGAGGAGGAGATGTACAGGCGCGAGATGCA
GGAGGTTCAAGTGGGTTGGACGACGAATGAGAAGGGCCTGATAGTCGACT
TCAAGGCCCGTATGGTTGCGCGGGGTTTCTCTCAAATCCCCGGCATCGAC
TTCCACCATTCATCCTCAGCGTTCCCGTCTGCAGCGTCTATCAAGACGGT
GATTGCCGTAGCCACTGAAAAGGGCAAGAAACTCGCGCACTGGGATGTGA
AGCAAGCGTACATCCACGCTAAGATAAAAGAAGAAATATACCTCAGGTTC
CCGGAAGGCTGTGGTAGCATGTCCGGCAAGGTGGTCAAGGTTGAGCGTGC
CCTGTATGGCCTACAGCGAGGAGCAAGCACATCGACGTGCGGTTCCATTT
CATTCGCGAGCTCTTCAACTCGGGCAAGATCACTGCAGAGTATGTTCCGA
CTGGAGAGCAGCACGCCGACATGCTGA back to topprotein sequence of EsuBft2505_3a-0001 >EsuBft2505_3 ID=EsuBft2505_3|Name=EsuBft2505_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=475bp
MKGGLTLTTKAGGEVWFPRTGKLLTQRGDQIKPTLHTTCAALIVPGDAKA
STPTDLNEYDLAHGHAHEILLRITVEKQGVQLTDGPLLPCLGCSMSKGQV
KPVQKSTSTRALLPLADDEEGGEGESRADASRQGWGGERDSESESDLDVM
EARGPGQATPFVPEEAPTAPGNGIRRQRSPVTPFGKGRLRRSDAGGAGGS
GGEEPGDPGGDGGSGGDPGDSENLEELKYDPADDRYPRGLEGKKLLWGAS
NAGPLRHGLESGRTRKQTREMQGAGEMPGPGETPDPEEELLATILETGGT
GIVEDYICNSLVKEQWDEEQTRRKEEEMYRREMQEVQVGWTTNEKGLIVD
FKARMVARGFSQIPGIDFHHSSSAFPSAASIKTVIAVATEKGKKLAHWDV
KQAYIHAKIKEEIYLRFPEGCGSMSGKVVKVERALYGLQRGASTSTCGSI
SFASSSTRARSLQSMFRLESSTPTC back to topmRNA from alignment at Scaffold_347:211699..214545- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2505_3a-0001 ID=EsuBft2505_3a-0001|Name=EsuBft2505_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2847bp|location=Sequence derived from alignment at Scaffold_347:211699..214545- (Ectocarpus subulatus male Bft15b)
CCTCCTCTCGCTGTCTTCGTTGGCGGAGGAGGGCCACACGTATTCGGGGA
TGAAGGGGGGCCTCACGCTGACCACGAAAGCCGGGGGGGAGGTGTGGTTC
CCCCGGACTGGAAAGCTGCTGACCCAACGAGGCGATCAAATAAAGCCAAC
GCTACACACCACCTGTGCAGCACTCATTGTTCCTGGCGATGCGAAAGCAT
CCACCCCCACTGACCTCAACGAGTACGACCTCGCGCACGGCCATGCCCAC
GAGATATTGCTCAGGATCACGGTGGAGAAGCAGGGAGTGCAGCTGACGGA
TGGACCGCTGCTACCCTGTCTTGGCTGTTCGATGTCCAAGGGACAGGTGA
AACCCGTCCAGAAGAGCACGAGCACACGCGCAGTTAAGAAGTTATTTCGC
GTGTAACTCGACTTGGGGGGAAAGATGAAAACCAGGATCATTGCTGGCAA
CTGGTACACACTGATCATTAGAGACTATTTCTCCCGTTGGACGCGTGTTT
TCTTCTTGAAGCACACGTCTGACGCAGCGGTTGGGTTTGAGAAGTTCCTG
GCGGACTACCGAACGAAAGGGGTTCCGTGTGAGGTTTATATCGCACGTAC
CGACGGTGGCGGCGAGTTCCAGGGGCAGTTTGCGGAAGTTTGCCGCAGAC
ACGGCATCAAACAAGAGTTTACCCCCCCTCACACCCCAAAGTACAACGGT
GTAGCGGAGAGAGCGCTAGGGTTGATCACTGATGCAGCGGTTGCGTCACG
CATCCAAGCGACGCAGCTGTTCCCCGACGCACCGCACCACCCCGGGTTGT
GGGCCGAGGCCATTTCGTGTGCATGCCATTAGCTGAACTGCACCGCCCCT
AAATCAAACGAGGGACACAAATCCGCCTACGAGATGTTCCACGACTCCCC
ACCGCCTGTCGGGTCTACATACCCGTTTCTCAAACCAGCCGTGTTCAAGT
CGAGAAGAAAAGCAAAGTCGCAACCCAAGGGCGAAAAAGGATGGTACCTT
GGTCCTGCCCACAATCACGCCCGTGACTGCGTTCGCATGATAACCGAAGC
TGGAACCGTAATAACCACCCGCAATTTCACCTGGCGCCACGTGCCCGCTG
CATCGCCCGCTCCCCCGCAGCTGCTACCTCTCGCAGATGACGAGGAGGGC
GGGGAGGGCGAGAGCAGAGCGGATGCATCACGCCAAGGTTGGGGGGGGGA
GAGAGACTCAGAGAGCGAGTCCGACCTCGACGTGATGGAGGCTCGTGGGC
CAGGGCAAGCGACGCCGTTTGTGCCCGAGGAGGCGCCGACGGCACCCGGC
AACGGGATTCGGAGGCAGCGTTCCCCCGTCACCCCTTTCGGGAAGGGGCG
ACTTCGGCGGAGGTAGTGACACCCCCACCGACAGCAGCAACAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCCCGAGCAGCAGGAAAAAAGGATCAAA
ATCTGTTGCAGAATCTAAATCTCAAGATAGAAAAATTGTTTATAATCAAA
AAGGATTGGAAAGAGAAATTTTACAACTTTGTACAGATTATTAAAAATTA
CGAATAAAACTGAGAGTAATACTTTATTATCTCTTTTAGATAAATCAATT
AAATCTATGGTTATTGAAGAAATTACAAAATGAACGTATTAAAGAGAAAA
TAAATGCTATTAAAGAGGATTTATCTAATATTAAAAAAGATAAAGAAATA
CAGCCTTTTAATTTTGATTCATATCAGCAGTGACGCCGGCGGTGCTGGCG
GCTCGGGCGGCGAAGAGCCCGGCGACCCAGGTGGGGACGGCGGTAGCGGT
GGTGATCCCGGCGACTCCGAGAACCTCGAGGAGTTGAAGTATGATCCAGC
CGACGACCGCTACCCCCGCGGGCTAGAAGGGAAGAAACTCCTCTGGGGCG
CCTCGAACGCTGGCCCGCTGCGCCATGGGCTTGAGAGTGGCCGCACGCGG
AAGCAGACCCGGGAGATGCAAGGTGCCGGGGAGATGCCGGGGCCCGGAGA
AACACCGGACCCGGAAGAAGAACTGCTGGCGACCATCCTGGAAACTGGCG
GGACGGGGATTGTTGAGGACTACATCTGCAACTCGCTTGTGAAGGAGCAG
TGGGACGAGGAGCAGACACGCCGAAAGGAGGAGGAGATGTACAGGCGCGA
GATGCAGGAGGTGGCCCGAAACAGCAGGCGTTCGGGGCCGAGGTCGACGC
CAGCGGGTCTTCGCAACCACTCCCAGACCCACAACTAAGTATGACCTCGC
CAATCGGGCAGAAGCCGAGTGAGGTGGAAGCAGTACCAATGACGTACAAG
GATGTGATGTGTTCCAAGTGCAAGGTTTTTTGGGAGGCGGCCACGAAGAA
AGAGACAGATGGCCACGACAAGACTGGAACCTTTACCAAGGTCAGAAAGC
TGCCCGAGGGGCGGAAGGCCATAGGTTCAAGTGGGTTGGACGACGAATGA
GAAGGGCCTGATAGTCGACTTCAAGGCCCGTATGGTTGCGCGGGGTTTCT
CTCAAATCCCCGGCATCGACTTCCACCATTCATCCTCAGCGTTCCCGTCT
GCAGCGTCTATCAAGACGGTGATTGCCGTAGCCACTGAAAAGGGCAAGAA
ACTCGCGCACTGGGATGTGAAGCAAGCGTACATCCACGCTAAGATAAAAG
AAGAAATATACCTCAGGTTCCCGGAAGGCTGTGGTAGCATGTCCGGCAAG
GTGGTCAAGGTTGAGCGTGCCCTGTATGGCCTACAGCGAGGAGCAAGCAC
ATCGACGTGCGGTTCCATTTCATTCGCGAGCTCTTCAACTCGGGCAAGAT
CACTGCAGAGTATGTTCCGACTGGAGAGCAGCACGCCGACATGCTGA back to topCoding sequence (CDS) from alignment at Scaffold_347:211699..214545- >EsuBft2505_3a-0001 ID=EsuBft2505_3a-0001|Name=EsuBft2505_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1428bp|location=Sequence derived from alignment at Scaffold_347:211699..214545- (Ectocarpus subulatus male Bft15b)
ATGAAGGGGGGCCTCACGCTGACCACGAAAGCCGGGGGGGAGGTGTGGTT
CCCCCGGACTGGAAAGCTGCTGACCCAACGAGGCGATCAAATAAAGCCAA
CGCTACACACCACCTGTGCAGCACTCATTGTTCCTGGCGATGCGAAAGCA
TCCACCCCCACTGACCTCAACGAGTACGACCTCGCGCACGGCCATGCCCA
CGAGATATTGCTCAGGATCACGGTGGAGAAGCAGGGAGTGCAGCTGACGG
ATGGACCGCTGCTACCCTGTCTTGGCTGTTCGATGTCCAAGGGACAGGTG
AAACCCGTCCAGAAGAGCACGAGCACACGCGCACTGCTACCTCTCGCAGA
TGACGAGGAGGGCGGGGAGGGCGAGAGCAGAGCGGATGCATCACGCCAAG
GTTGGGGGGGGGAGAGAGACTCAGAGAGCGAGTCCGACCTCGACGTGATG
GAGGCTCGTGGGCCAGGGCAAGCGACGCCGTTTGTGCCCGAGGAGGCGCC
GACGGCACCCGGCAACGGGATTCGGAGGCAGCGTTCCCCCGTCACCCCTT
TCGGGAAGGGGCGACTTCGGCGGAGTGACGCCGGCGGTGCTGGCGGCTCG
GGCGGCGAAGAGCCCGGCGACCCAGGTGGGGACGGCGGTAGCGGTGGTGA
TCCCGGCGACTCCGAGAACCTCGAGGAGTTGAAGTATGATCCAGCCGACG
ACCGCTACCCCCGCGGGCTAGAAGGGAAGAAACTCCTCTGGGGCGCCTCG
AACGCTGGCCCGCTGCGCCATGGGCTTGAGAGTGGCCGCACGCGGAAGCA
GACCCGGGAGATGCAAGGTGCCGGGGAGATGCCGGGGCCCGGAGAAACAC
CGGACCCGGAAGAAGAACTGCTGGCGACCATCCTGGAAACTGGCGGGACG
GGGATTGTTGAGGACTACATCTGCAACTCGCTTGTGAAGGAGCAGTGGGA
CGAGGAGCAGACACGCCGAAAGGAGGAGGAGATGTACAGGCGCGAGATGC
AGGAGGTTCAAGTGGGTTGGACGACGAATGAGAAGGGCCTGATAGTCGAC
TTCAAGGCCCGTATGGTTGCGCGGGGTTTCTCTCAAATCCCCGGCATCGA
CTTCCACCATTCATCCTCAGCGTTCCCGTCTGCAGCGTCTATCAAGACGG
TGATTGCCGTAGCCACTGAAAAGGGCAAGAAACTCGCGCACTGGGATGTG
AAGCAAGCGTACATCCACGCTAAGATAAAAGAAGAAATATACCTCAGGTT
CCCGGAAGGCTGTGGTAGCATGTCCGGCAAGGTGGTCAAGGTTGAGCGTG
CCCTGTATGGCCTACAGCGAGGAGCAAGCACATCGACGTGCGGTTCCATT
TCATTCGCGAGCTCTTCAACTCGGGCAAGATCACTGCAGAGTATGTTCCG
ACTGGAGAGCAGCACGCCGACATGCTGA back to top
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