Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft820_8 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 53 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft820_8a-0001 ID=EsuBft820_8a-0001|Name=EsuBft820_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=530bp|location=Sequence derived from alignment at Scaffold_347:151315..151927+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGGTGCAGGTCTCGGCAGACGTATCCGGAGTAACGTGCGTGGTAAG
GAAGTGGGAACAAGGGGTGGCAGTGTCGGGGGTCTGGGGGAGCATGGGCT
TGAATGGGGATTGCCTCAGAAAGAGCAAGACGGCGGATGTTTTTCTCTTG
GTGTGACCGGTGGCAATATCGATCAGCAATGTCGCACAGACTTTTGCGCG
CCGAAATATGCGTGCGACAGCTTTAACCTAACCACGTCGGTGGAAAGCGG
ATTTCTGTTCAATACGGTGTCAGGGGTACCAGGGAAGACGGGGCCGAGTT
TTGTTTGATTTCGGGTGGATGAGGTTGGGGTTTTGTTCGTTTTTCTCCAT
CTAAGGTTCGTGCCTAGAGTTCAGCTGTAGTGTTTCGACAAAAGTTTTGT
TGACTTAGAGGCAAACATTCCTAGCTATTGGGCATCGAGTTAATTTGGCT
TGGAATGACGGCCTTTACGATCGACTTTTTATGTATGTCTGGATTTATCT
GCACTTGTCGGAGGGCAAACAAAAAAATAA back to topprotein sequence of EsuBft820_8a-0001 >EsuBft820_8 ID=EsuBft820_8|Name=EsuBft820_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=51bp
MSVQVSADVSGVTCVVRKWEQGVAVSGVWGSMGLNGDCLRKSKTADVFLL
V back to topmRNA from alignment at Scaffold_347:151315..151927+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft820_8a-0001 ID=EsuBft820_8a-0001|Name=EsuBft820_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=613bp|location=Sequence derived from alignment at Scaffold_347:151315..151927+ (Ectocarpus subulatus male Bft15b)
ATGTCGGTGCAGGTCTCGGCAGACGTATCCGGAGTAACGTGCGTAAGTAA
ATGCAGCCGCGATACGCACAACAATCATCATGTCGGGAGTGCTGAGGGGG
GAGGGCTTGGCCCTTGTGGTTGAAGGTGGTAAGGAAGTGGGAACAAGGGG
TGGCAGTGTCGGGGGTCTGGGGGAGCATGGGCTTGAATGGGGATTGCCTC
AGAAAGAGCAAGACGGCGGATGTTTTTCTCTTGGTGTGACCGGTGGCAAT
ATCGATCAGCAATGTCGCACAGACTTTTGCGCGCCGAAATATGCGTGCGA
CAGCTTTAACCTAACCACGTCGGTGGAAAGCGGATTTCTGTTCAATACGG
TGTCAGGGGTACCAGGGAAGACGGGGCCGAGTTTTGTTTGATTTCGGGTG
GATGAGGTTGGGGTTTTGTTCGTTTTTCTCCATCTAAGGTTCGTGCCTAG
AGTTCAGCTGTAGTGTTTCGACAAAAGTTTTGTTGACTTAGAGGCAAACA
TTCCTAGCTATTGGGCATCGAGTTAATTTGGCTTGGAATGACGGCCTTTA
CGATCGACTTTTTATGTATGTCTGGATTTATCTGCACTTGTCGGAGGGCA
AACAAAAAAATAA back to topCoding sequence (CDS) from alignment at Scaffold_347:151315..151927+ >EsuBft820_8a-0001 ID=EsuBft820_8a-0001|Name=EsuBft820_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=156bp|location=Sequence derived from alignment at Scaffold_347:151315..151927+ (Ectocarpus subulatus male Bft15b)
ATGTCGGTGCAGGTCTCGGCAGACGTATCCGGAGTAACGTGCGTGGTAAG
GAAGTGGGAACAAGGGGTGGCAGTGTCGGGGGTCTGGGGGAGCATGGGCT
TGAATGGGGATTGCCTCAGAAAGAGCAAGACGGCGGATGTTTTTCTCTTG
GTGTGA back to top
|