Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1014_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 129 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1014_6a-0001 ID=EsuBft1014_6a-0001|Name=EsuBft1014_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1299bp|location=Sequence derived from alignment at Scaffold_119:186355..187849- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGGTCAAGGCGGCTAAACAGGCATAATCGAACCTCGGTATACTGTTGTCA
CACTCACACTTGAGGTGCTGGTGCAAGTTTTGGGCGTTCGGTAGCTATCT
GTGCTTCAAACCGAAGCTACCTCGCAAGAGGGCCTCAGCAGGGCTTCAAC
ACGCGGAGCATCTCGGTGCAGTCGGTGCAGCAGCGGCACCAGGCCCAGGT
TTGCCTTACGAGGAGAATCTTGCGGTCTCAGCGGGTGCGTCGTATAGGTC
AGGGTCTGTACTTGCTCAGGCTGAAACAGCATCGAGGATTACCAATTGTA
GACGCCAATACCGGCGATTCGGCCAGCAGCTATATACCGCCATTTTCAAC
GGTTTTTTCGGTTTTTCCAGGATGGTCCGGCAGCGCCGCGCCTCGTGTGG
CAAAGTGGTGCACGGCAAAGAACCGGCAGCGGCAGGGGAGCTTCGGCGAT
GCTTCGCATGTGACCGCCCCGGTAGCCGCGACGGGTGCTCGACCAATTGG
CAGCACGTGGTGGACTCCGAATACTGGGCGGAGCTGGGCGAGTGGTCTGC
AACGGTAGGGGAAGGGTGGACTCATGAGCGCGACCTTGTAGGAGACCCTC
TCAAGGCGGGAGAGTGCATCTGTCGCCGCGCCGACTGTGTGGTTAATTTG
TACCAAAGGTACAAGGGGAGGCGCCAGAGGGAAGAGAAAGGAGCTTTGCA
CACCATGGTGATTGGGCAGCGGTCGCCGATGGGCAGGTGACTCATGCGTC
CTGTCATATGCATCGATCTGGGCGAACTCTAGAACGTTGAAATTGTAGGA
AGACGCGACAACGTTGACCCCCGTGAAAACTTTCACCCCGTTCTATTTTT
TCTGGTCAAGTTATCCTTTCTACGTTCCCACGTGACTACGTAGATATGTA
TGTGAGTTTCTGGGATCGCGACCGTCACCATGTGCTGTTGATGGTGTAGT
ATTCTACCGAGTGGTGGACGTCCCATCTCTCAACCTTGCATCGGTAGCCC
TCGCCTTACTCCTTATTTCTCGAGTGGCATTGTTCCCTTTTCCTTTGTTT
TGGTTCTCACATAAGAAAATGGTAAGTAAGAGGATGCTGTGGTCGTGCAT
CGTTGTCTGTCCTGCCCGTGTTGGTCGAAGAGTCTCGTGGCAGGAGAGAG
GGAGTCGACCCCACCCCCACAAGTCAACGGCAAAAGATATGTAGAGCGCC
CGCGAGGAGGGTGGAAACAAACATATTTATGCTGCCAGCATGCCAGCATA
CTCCCTCTGCCAGGTAACACCTAACAAAATGAAGAAATATTAAGTACGA back to topprotein sequence of EsuBft1014_6a-0001 >EsuBft1014_6 ID=EsuBft1014_6|Name=EsuBft1014_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=122bp
MVRQRRASCGKVVHGKEPAAAGELRRCFACDRPGSRDGCSTNWQHVVDSE
YWAELGEWSATVGEGWTHERDLVGDPLKAGECICRRADCVVNLYQRYKGR
RQREEKGALHTMVIGQRSPMGR back to topmRNA from alignment at Scaffold_119:186355..187849- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1014_6a-0001 ID=EsuBft1014_6a-0001|Name=EsuBft1014_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1495bp|location=Sequence derived from alignment at Scaffold_119:186355..187849- (Ectocarpus subulatus male Bft15b)
TGGTCAAGGCGGCTAAACAGGTACGCCGGGCACTCGCAGATGGTATCCTG
TTTTCTTTTTGACCCCCCCTCAAAAGCCCCCTGGGCAGCAGGCTGCATGC
CACAGCAGGCTGCGTGTTCACAGAGCCGTAGGAGCCTCGTCGTCGCCAAC
AGGCATAATCGAACCTCGGTATACTGTTGTCACACTCACACTTGAGGTGC
TGGTGCAAGTTTTGGGCGTTCGGTAGCTATCTGTGCTTCAAACCGAAGCT
ACCTCGCAAGAGGGCCTCAGCAGGGCTTCAACACGCGGAGCATCTCGGTG
CAGTCGGTGCAGCAGCGGCACCAGGCCCAGGTTTGCCTTACGAGGAGAAT
CTTGCGGTCTCAGCGGGTGCGTCGTATAGGTCAGGGTCTGTACTTGCTCA
GGCTGAAACAGCATCGAGGATTACCAATTGTAGACGCCAATACCGGCGAT
TCGGCCAGCAGCTATATACCGCCATTTTCAACGGTTTTTTCGGTTTTTCC
AGGATGGTCCGGCAGCGCCGCGCCTCGTGTGGCAAAGTGGTGCACGGCAA
AGAACCGGCAGCGGCAGGGGAGCTTCGGCGATGCTTCGCATGTGACCGCC
CCGGTAGCCGCGACGGGTGCTCGACCAATTGGCAGCACGTGGTGGACTCC
GAATACTGGGCGGAGCTGGGCGAGTGGTCTGCAACGGTAGGGGAAGGGTG
GACTCATGAGCGCGACCTTGTAGGAGACCCTCTCAAGGCGGGAGAGTGCA
TCTGTCGCCGCGCCGACTGTGTGGTTAATTTGTACCAAAGGTACAAGGGG
AGGCGCCAGAGGGAAGAGAAAGGAGCTTTGCACACCATGGTGATTGGGCA
GCGGTCGCCGATGGGCAGGTACCCGTCGACGGGCTCCCAGGTATGACACC
GCAGAAACACCACCTTTAGTGCGGCGGTGTAGGTGACTCATGCGTCCTGT
CATATGCATCGATCTGGGCGAACTCTAGAACGTTGAAATTGTAGGAAGAC
GCGACAACGTTGACCCCCGTGAAAACTTTCACCCCGTTCTATTTTTTCTG
GTCAAGTTATCCTTTCTACGTTCCCACGTGACTACGTAGATATGTATGTG
AGTTTCTGGGATCGCGACCGTCACCATGTGCTGTTGATGGTGTAGTATTC
TACCGAGTGGTGGACGTCCCATCTCTCAACCTTGCATCGGTAGCCCTCGC
CTTACTCCTTATTTCTCGAGTGGCATTGTTCCCTTTTCCTTTGTTTTGGT
TCTCACATAAGAAAATGGTAAGTAAGAGGATGCTGTGGTCGTGCATCGTT
GTCTGTCCTGCCCGTGTTGGTCGAAGAGTCTCGTGGCAGGAGAGAGGGAG
TCGACCCCACCCCCACAAGTCAACGGCAAAAGATATGTAGAGCGCCCGCG
AGGAGGGTGGAAACAAACATATTTATGCTGCCAGCATGCCAGCATACTCC
CTCTGCCAGGTAACACCTAACAAAATGAAGAAATATTAAGTACGA back to topCoding sequence (CDS) from alignment at Scaffold_119:186355..187849- >EsuBft1014_6a-0001 ID=EsuBft1014_6a-0001|Name=EsuBft1014_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=369bp|location=Sequence derived from alignment at Scaffold_119:186355..187849- (Ectocarpus subulatus male Bft15b)
ATGGTCCGGCAGCGCCGCGCCTCGTGTGGCAAAGTGGTGCACGGCAAAGA
ACCGGCAGCGGCAGGGGAGCTTCGGCGATGCTTCGCATGTGACCGCCCCG
GTAGCCGCGACGGGTGCTCGACCAATTGGCAGCACGTGGTGGACTCCGAA
TACTGGGCGGAGCTGGGCGAGTGGTCTGCAACGGTAGGGGAAGGGTGGAC
TCATGAGCGCGACCTTGTAGGAGACCCTCTCAAGGCGGGAGAGTGCATCT
GTCGCCGCGCCGACTGTGTGGTTAATTTGTACCAAAGGTACAAGGGGAGG
CGCCAGAGGGAAGAGAAAGGAGCTTTGCACACCATGGTGATTGGGCAGCG
GTCGCCGATGGGCAGGTGA back to top
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