EsuBft308_12 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	EsuBft308_12a-0001
Unique Name	EsuBft308_12
Type	polypeptide
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length	59

Homology

[Close]

BLAST of EsuBft308_12a-0001 vs. uniprot
Match: A0A6H5K7I7_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7I7_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 8.580e-36
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query:    1 MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDVPALAPGVVD 59
            MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDVPALAPGVVD
Sbjct:    1 MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDVPALAPGVVD 59

[Close]

BLAST of EsuBft308_12a-0001 vs. uniprot
Match: A0A6H5K7I7_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7I7_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 6.740e-31
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 2

Query:   17 MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDVPALAPGVVD 193
            MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDVPALAPGVVD
Sbjct:    1 MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDVPALAPGVVD 59

The following BLAST results are available for this feature:

BLAST of EsuBft308_12a-0001 vs. uniprot
BLAST of EsuBft308_12a-0001 vs. uniprot

BLAST of EsuBft308_12a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K7I7_9PHAE	8.580e-36	100.00	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]

BLAST of EsuBft308_12a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K7I7_9PHAE	6.740e-31	100.00	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 12..51 e-value: 6.4E-6 score: 27.9
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 27..53 e-value: 1.7E-5 score: 24.6
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 12..49

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold_161	contig	Scaffold_161:260436..260806 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b	2020-06-19

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft308_12a-0001	EsuBft308_12a-0001	Ectocarpus subulatus male Bft15b	mRNA	Scaffold_161 260420..264338 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>EsuBft308_12 ID=EsuBft308_12|Name=EsuBft308_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=59bp
MELILTSFLSPILWVIPRGAVQNMMTNLHPTDLTQVACVCQDWRQLAQDV
PALAPGVVD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR036047	F-box-like_dom_sf