EsuBft103_7 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEsuBft103_7a-0001
Unique NameEsuBft103_7
Typepolypeptide
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length70
Homology
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: D7G710_ECTSI (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G710_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.050e-41
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70
            MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT
Sbjct:    1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A835ZC95_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC95_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.280e-16
Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVR 67
            MS    S KGVLITCDVPTKQFI+ L+++ A   +++DLD TH+FV+  +V EI+ +LE+L E NVYVR
Sbjct:    1 MSNVRTSRKGVLITCDVPTKQFILHLNSKQAQGFIINDLDETHLFVEASAVHEIREQLERLQEMNVYVR 69          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A383WPN6_TETOB (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPN6_TETOB)

HSP 1 Score: 55.8 bits (133), Expect = 9.570e-9
Identity = 26/67 (38.81%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    7 SSKGVLITCDVPTKQFIMSLD-----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 68
            ++ G L+TCDVPTK+F++ L+      + A ++ +LD TH+ VK+D V+ +Q +++  + KNVY  P
Sbjct:    4 ATSGALLTCDVPTKEFLVWLNNQNKATKRAFIIKELDDTHLLVKEDMVEFVQEQVKAFNNKNVYTPP 70          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A6T6HXU1_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HXU1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.130e-8
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    7 SSKGVLITCDVPTKQFIMSLDARLAC----VVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
            +S G LITCDVPTKQ+I  L+   A     ++ DLDATH+ VKK +  EI+R +E   ++NV+
Sbjct:   36 ASAGYLITCDVPTKQYIQYLNEMKAVDKKFIIEDLDATHLLVKKKARAEIERRVESWMDENVF 98          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A2V3IN38_9FLOR (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN38_9FLOR)

HSP 1 Score: 56.2 bits (134), Expect = 1.700e-8
Identity = 26/61 (42.62%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    7 SSKGVLITCDVPTKQFIMSLDARLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
            ++ GVLI+CD+P KQF++ +D +     ++SDLD THV VK+ ++  I+ +L++L+E+N Y
Sbjct:   50 ATAGVLISCDIPVKQFLLHVDEKDTGKFIISDLDETHVLVKESALDYIKSQLDKLYEENQY 110          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: M2VWH3_GALSU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWH3_GALSU)

HSP 1 Score: 55.1 bits (131), Expect = 1.710e-8
Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    9 KGVLITCDVPTKQFIMSLDARLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
            +GVLITCD+P KQFI+ LD   A    V+++LD T +F++  ++K +Q +LE+L+E+N +
Sbjct:    6 RGVLITCDIPMKQFILKLDEDQAPNRFVIANLDETSLFIQSWALKLVQEKLEELYEENYF 65          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: I0Z2U2_COCSC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z2U2_COCSC)

HSP 1 Score: 51.6 bits (122), Expect = 4.170e-7
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    9 KGVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPR 69
            +GVL+ CDVPTK+FI+SL+         V+ DLD T +FV+   V+ +++ L++ +E+N Y  PR
Sbjct:    2 RGVLLQCDVPTKEFILSLNDSKPTNERFVILDLDDTRLFVQPTVVEWLEKRLKEFNEENTYQPPR 66          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A1X6PEZ7_PORUM (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEZ7_PORUM)

HSP 1 Score: 50.4 bits (119), Expect = 1.140e-6
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    7 SSKGVLITCDVPTKQFIMSLDARLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
            ++ GVL+TCDVP KQF++ LD   A    +V+ LD TH+F+   +V  I+ +LE+L  +N Y
Sbjct:    4 ATHGVLVTCDVPVKQFLLKLDNDRAPDRFIVAKLDETHLFIHAWAVDMIKDQLERLFAENQY 65          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A4S7H4_OSTLU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7H4_OSTLU)

HSP 1 Score: 49.3 bits (116), Expect = 3.720e-6
Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 0
Query:   10 GVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 68
            GV+IT DVP KQ+I+ L+    A    VV DLDA  V V+ D+V  I RE+E   +   YV P
Sbjct:    7 GVMITADVPIKQYILHLNDVAPAERKFVVVDLDARRVLVQPDAVDAIHREIEAFQQSTQYVAP 69          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: B5Y3U5_PHATC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3U5_PHATC)

HSP 1 Score: 49.7 bits (117), Expect = 5.710e-6
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    8 SKGVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 65
            S G L++CDVPTKQFI  L+         ++ DLDATH+ V+  +  EI+R++E+  + NV+
Sbjct:   37 SAGYLVSCDVPTKQFIQHLNDLKPVDKKFILQDLDATHLLVELKARDEIRRKVEEWEDSNVF 98          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: D7G710_ECTSI (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G710_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.760e-37
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1
Query:   43 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 252
            MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT
Sbjct:    1 MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPRT 70          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A835ZC95_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC95_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.330e-13
Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
Query:   43 MSTGYRSSKGVLITCDVPTKQFIMSLDARLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVR 243
            MS    S KGVLITCDVPTKQFI+ L+++ A   +++DLD TH+FV+  +V EI+ +LE+L E NVYVR
Sbjct:    1 MSNVRTSRKGVLITCDVPTKQFILHLNSKQAQGFIINDLDETHLFVEASAVHEIREQLERLQEMNVYVR 69          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A383WPN6_TETOB (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPN6_TETOB)

HSP 1 Score: 55.8 bits (133), Expect = 1.130e-6
Identity = 26/67 (38.81%), Postives = 45/67 (67.16%), Query Frame = 1
Query:   61 SSKGVLITCDVPTKQFIMSLD-----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRP 246
            ++ G L+TCDVPTK+F++ L+      + A ++ +LD TH+ VK+D V+ +Q +++  + KNVY  P
Sbjct:    4 ATSGALLTCDVPTKEFLVWLNNQNKATKRAFIIKELDDTHLLVKEDMVEFVQEQVKAFNNKNVYTPP 70          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A2V3IN38_9FLOR (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN38_9FLOR)

HSP 1 Score: 56.6 bits (135), Expect = 1.600e-6
Identity = 28/80 (35.00%), Postives = 49/80 (61.25%), Query Frame = 1
Query:    7 RPLAHSTLPRCAMSTGYRSSKGVLITCDVPTKQFIMSLDARLA--CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYV 240
            +P     +     S    ++ GVLI+CD+P KQF++ +D +     ++SDLD THV VK+ ++  I+ +L++L+E+N Y 
Sbjct:   32 KPRTRGNVKTRTQSEMVTATAGVLISCDIPVKQFLLHVDEKDTGKFIISDLDETHVLVKESALDYIKSQLDKLYEENQYT 111          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: A0A6T6HXU1_9STRA (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HXU1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.040e-6
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1
Query:   61 SSKGVLITCDVPTKQFIMSLDARLAC----VVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 237
            +S G LITCDVPTKQ+I  L+   A     ++ DLDATH+ VKK +  EI+R +E   ++NV+
Sbjct:   36 ASAGYLITCDVPTKQYIQYLNEMKAVDKKFIIEDLDATHLLVKKKARAEIERRVESWMDENVF 98          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: M2VWH3_GALSU (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWH3_GALSU)

HSP 1 Score: 54.7 bits (130), Expect = 2.550e-6
Identity = 27/60 (45.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query:   67 KGVLITCDVPTKQFIMSLDARLA---CVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVY 237
            +GVLITCD+P KQFI+ LD   A    V+++LD T +F++  ++K +Q +LE+L+E+N +
Sbjct:    6 RGVLITCDIPMKQFILKLDEDQAPNRFVIANLDETSLFIQSWALKLVQEKLEELYEENYF 65          
BLAST of EsuBft103_7a-0001 vs. uniprot
Match: I0Z2U2_COCSC (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z2U2_COCSC)

HSP 1 Score: 51.6 bits (122), Expect = 3.310e-5
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 1
Query:   67 KGVLITCDVPTKQFIMSLD----ARLACVVSDLDATHVFVKKDSVKEIQRELEQLHEKNVYVRPR 249
            +GVL+ CDVPTK+FI+SL+         V+ DLD T +FV+   V+ +++ L++ +E+N Y  PR
Sbjct:    2 RGVLLQCDVPTKEFILSLNDSKPTNERFVILDLDDTRLFVQPTVVEWLEKRLKEFNEENTYQPPR 66          
The following BLAST results are available for this feature:
BLAST of EsuBft103_7a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G710_ECTSI2.050e-41100.00General transcription and DNA repair factor IIH su... [more]
A0A835ZC95_9STRA6.280e-1656.52General transcription and DNA repair factor IIH su... [more]
A0A383WPN6_TETOB9.570e-938.81General transcription and DNA repair factor IIH su... [more]
A0A6T6HXU1_9STRA1.130e-847.62General transcription and DNA repair factor IIH su... [more]
A0A2V3IN38_9FLOR1.700e-842.62General transcription and DNA repair factor IIH su... [more]
M2VWH3_GALSU1.710e-845.00General transcription and DNA repair factor IIH su... [more]
I0Z2U2_COCSC4.170e-741.54General transcription and DNA repair factor IIH su... [more]
A0A1X6PEZ7_PORUM1.140e-643.55General transcription and DNA repair factor IIH su... [more]
A4S7H4_OSTLU3.720e-646.03General transcription and DNA repair factor IIH su... [more]
B5Y3U5_PHATC5.710e-641.94General transcription and DNA repair factor IIH su... [more]

Pages

back to top
BLAST of EsuBft103_7a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G710_ECTSI1.760e-37100.00General transcription and DNA repair factor IIH su... [more]
A0A835ZC95_9STRA3.330e-1356.52General transcription and DNA repair factor IIH su... [more]
A0A383WPN6_TETOB1.130e-638.81General transcription and DNA repair factor IIH su... [more]
A0A2V3IN38_9FLOR1.600e-635.00General transcription and DNA repair factor IIH su... [more]
A0A6T6HXU1_9STRA2.040e-647.62General transcription and DNA repair factor IIH su... [more]
M2VWH3_GALSU2.550e-645.00General transcription and DNA repair factor IIH su... [more]
I0Z2U2_COCSC3.310e-541.54General transcription and DNA repair factor IIH su... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009400TFIIH subunit TTDA/Tfb5SMARTSM01395Tbf5_2coord: 4..67
e-value: 4.7E-16
score: 69.3
IPR009400TFIIH subunit TTDA/Tfb5PFAMPF06331Tfb5coord: 6..66
e-value: 8.5E-23
score: 80.2
IPR009400TFIIH subunit TTDA/Tfb5PANTHERPTHR28580GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5coord: 7..68
IPR035935TFB5-like superfamilyGENE3D3.30.70.1220coord: 2..67
e-value: 3.1E-21
score: 76.9
IPR035935TFB5-like superfamilySUPERFAMILY142897TFB5-likecoord: 9..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_344contigScaffold_344:70479..72248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft103_7a-0001EsuBft103_7a-0001Ectocarpus subulatus male Bft15bmRNAScaffold_344 70437..73031 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EsuBft103_7 ID=EsuBft103_7|Name=EsuBft103_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=70bp
MSTGYRSSKGVLITCDVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVK
EIQRELEQLHEKNVYVRPRT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009400TFIIH_TTDA/Tfb5
IPR035935TFB5-like_sf