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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7G873 |
ProteomeId | EsuBft99_22 |
Protein domains | Coil |
Protein domains | IPR000477 |
Protein domains | PTHR19446 |
Owner | apollo_admin@sb-roscoff.fr |
Note | probable rna-directed dna polymerase from transposon x-element os:drosophila melanogaster gn:x- [Automatic annotation] |
Nb exon | 4 |
Max annot lvl | 2759|Eukaryota |
Length | 1145 |
Evalue | 1.57e-45 |
EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
Date last modified | 2016-06-15 |
Date creation | 2016-06-15 |
KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
KEGG Module | M00089 |
EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
Description | acetylation-dependent protein binding |
COG category | BK |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft99_22a-0001 ID=EsuBft99_22a-0001|Name=EsuBft99_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1145bp|location=Sequence derived from alignment at Scaffold_501:257606..260038+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACA TCGACCGATCTAGAAAGAAGGGGAGTAAGAAACAGAGGAAAGCGTTCCGG TGGAACGTAGAGCGTTTGGGAGACGATGGGACACGGGATGAATTCCAGAA GGTGGACATACAAGCAGCAGGGGACAGGGTCATTGAAGGGTGGGAGTCCA TAGTGAACACAACGGCAGAGAGAGTCGTGGGAAAGAAGGTGGTGAAAGGA CTAGTGAAAAAGAAGAAAAAGTGCATTTGGGACGAAGTAGTGCAGAAGGC CAACGGAGGCCTGGAGGGGAACGTCAAGCAGATGTGGGAAGGGATAAGAG GAATTGTAAAAAAGACCGCGCAAGGGGGGGATACAGGGGTAGCAACTTTG CGAGGAGCGGATGGGATAGTCAAGGAGTTCATGAAGTTTGGGGGAAAGGG GATGATCCAGCTGATGGTACTGCTATACAATTGGGTGTGGAAAAACGAGT ATACGCCAAGTAGATGGAGGGAAGGAGTGGTTGTGAACTTGTTTAAGAAA GGAGACAAGACTGACCCAGGAAACTACAGGGGGATCACACTGTTGAACAC AGTAGGAAAAGTGTTCTGTAAGCTGCTGAACGATAGGATAGTGGGAGTAT TGGAGAAGGAACATAGCATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAG AGGGGGTGCGTAGACCACGTGTTCACGGTAGGGAGAATCATCCAAGGTAG AAAGAGGGCGGGAAAGCCGACGTACTGCTTCTTCCTGGACGTGAAAAGGC ATAAGACACCGTATGAAGAAATGGGCTGTGGAAATAAGTGTCCAAGTACG GGACCAAGGGGAAAATGTGGAGAGAGCTGAAGAAGATGACAGAGTGAACG CAAAGCGCGGTCATGATAGACGGAGAACTGTCTAAATTCTTCGAC back to topprotein sequence of EsuBft99_22a-0001 >EsuBft99_22 ID=EsuBft99_22|Name=EsuBft99_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=359bp
MAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNIDRSRKKGSKKQRKAFR WNVERLGDDGTRDEFQKVDIQAAGDRVIEGWESIVNTTAERVVGKKVVKG LVKKKKKCIWDEVVQKANGGLEGNVKQMWEGIRGIVKKTAQGGDTGVATL RGADGIVKEFMKFGGKGMIQLMVLLYNWVWKNEYTPSRWREGVVVNLFKK GDKTDPGNYRGITLLNTVGKVFCKLLNDRIVGVLEKEHSISEGQAGFRKK RGCVDHVFTVGRIIQGRKRAGKPTYCFFLDVKRHKTPYEEMGCGNKCPST GPRGKCGES back to topmRNA from alignment at Scaffold_501:257606..260038+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft99_22a-0001 ID=EsuBft99_22a-0001|Name=EsuBft99_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2433bp|location=Sequence derived from alignment at Scaffold_501:257606..260038+ (Ectocarpus subulatus male Bft15b) ATGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACA
TCGACCGATCTAGAAAGAAGGGGAGTAAGAAACAGAGGAAAGCGTTCCGG
TGGAACGTAGAGCGTTTGGGAGACGATGGGACACGGGATGAATTCCAGAA
GGTACTGGCTGGTAGTGTACAACCTTTCAGCAAACTGCTGAGAAGCGTTG
AAGACGGACAGGTGGACATACAAGCAGCAGGGGACAGGGTCATTGAAGGG
TGGGAGTCCATAGTGAACACAACGGCAGAGAGAGTCGTGGGAAAGAAGGT
GGTACGATGTGGGGTATCGGTTAAGTGGTGGGATGACGAGCTGAAAGAAG
AAATAGGGGAACGTAGAGAAGTCTTCAAGCAGTACCTGAGTGAGGCGTCT
GAGGATACTTGAGAAAAGTACAGGGCCAAAGTAAAACAGGTGAAAGGACT
AGTGAAAAAGAAGAAAAAGTGCATTTGGGACGAAGTAGTGCAGAAGGCCA
ACGGAGGCCTGGAGGGGAACGTCAAGCAGATGTGGGAAGGGATAAGAGGA
ATTGTAAAAAAGACCGCGCAAGGGGGGGATACAGGGGTAGCAACTTTGCG
AGGTGTGCACGGTGGACTACCGTAAAAATCGGGGTCTTCGCACACTGTGC
GGTCGCCTTTTTTAATGTCTTCGTTCTTCGCACAGGGGTGCGGAGACGCC
GATATGTGCGGAGACCCCGATACATGTGCGGAAATCGAATTAAATTATTT
GGTTGTACAGTATTATCGCACACCCCGTGCGATGACGCCGATACGTGCGG
TATTGAATAGAATTGAAGGGGGTTAAGGTGGGGTGCTTTGAACGCACACC
CTGTGCGAAGACTCCGATATGTGCGCTCCAAATGAAATCACAGCGGACAT
TGCAGTACTCCACGTGAAAGGTAGTCCTGCATGATCCGTCAAAACACAGG
AAAAAAGCACGCACACACACACGTCGCACACTGTGTTACCAAGCGGCCTC
GTCACGACCCTCACGGGCGGGCAGGCTAAGAATACATAGGTGGCTCCATC
CATCTCACAGCCTACATCTGGCNCGGAAGCGCCCAATCTCATTGCTAGGA
TCGGGGTCTCCGCACAGTGTGCGTAGACCCCGATCCCTGTGCGAGAATCG
AATCAAATCATGTGGAACCCGGTTTTTGTTACGCACCTCTGTGCCATGAC
CCCGACCCGTGCGGAGACTCCGATCCGTGCGAAGACCCCGATTCTTACGG
TAGTCAGCAGTGGGGGGGGGGGGGGGTACNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
AACCCAACCCCGATGGCAAAACACCGGGGGGGGGGTCAGCAGTGGGAAGG
GAAAAAAAGAAGCTCTAGCAGGACACTATAATCCAAGAGACTTGGAGTGC
CCTCGGGGAATGAAGTTTTTGACCGAGTGTTCAAGAAGGAGGTGGACGCA
TGGGGTTGTGTGTGAACAAGCTGCAGTGCCACAAAGCAGCAGGAGCGGAT
GGGATAGTCAAGGAGTTCATGAAGTTTGGGGGAAAGGGGATGATCCAGCT
GATGGTACTGCTATACAATTGGGTGTGGAAAAACGAGTATACGCCAAGTA
GATGGAGGGAAGGAGTGGTTGTGAACTTGTTTAAGAAAGGAGACAAGACT
GACCCAGGAAACTACAGGGGGATCACACTGTTGAACACAGTAGGAAAAGT
GTTCTGTAAGCTGCTGAACGATAGGATAGTGGGAGTATTGGAGAAGGAAC
ATAGCATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGTA
GACCACGTGTTCACGGTAGGGAGAATCATCCAAGGTAGAAAGAGGGCGGG
AAAGCCGACGTACTGCTTCTTCCTGGACGTGAAAAGGCATAAGACACCGT
ATGAAGAAATGGGCTGTGGAAATAAGTGTCCAAGTACGGGACCAAGGGGA
AAATGTGGAGAGAGCTGAAGAAGATGACAGAGTGAACGCAAAGCGCGGTC
ATGATAGACGGAGAACTGTCTAAATTCTTCGAC back to topCoding sequence (CDS) from alignment at Scaffold_501:257606..260038+ >EsuBft99_22a-0001 ID=EsuBft99_22a-0001|Name=EsuBft99_22a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1080bp|location=Sequence derived from alignment at Scaffold_501:257606..260038+ (Ectocarpus subulatus male Bft15b) ATGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACA TCGACCGATCTAGAAAGAAGGGGAGTAAGAAACAGAGGAAAGCGTTCCGG TGGAACGTAGAGCGTTTGGGAGACGATGGGACACGGGATGAATTCCAGAA GGTGGACATACAAGCAGCAGGGGACAGGGTCATTGAAGGGTGGGAGTCCA TAGTGAACACAACGGCAGAGAGAGTCGTGGGAAAGAAGGTGGTGAAAGGA CTAGTGAAAAAGAAGAAAAAGTGCATTTGGGACGAAGTAGTGCAGAAGGC CAACGGAGGCCTGGAGGGGAACGTCAAGCAGATGTGGGAAGGGATAAGAG GAATTGTAAAAAAGACCGCGCAAGGGGGGGATACAGGGGTAGCAACTTTG CGAGGAGCGGATGGGATAGTCAAGGAGTTCATGAAGTTTGGGGGAAAGGG GATGATCCAGCTGATGGTACTGCTATACAATTGGGTGTGGAAAAACGAGT ATACGCCAAGTAGATGGAGGGAAGGAGTGGTTGTGAACTTGTTTAAGAAA GGAGACAAGACTGACCCAGGAAACTACAGGGGGATCACACTGTTGAACAC AGTAGGAAAAGTGTTCTGTAAGCTGCTGAACGATAGGATAGTGGGAGTAT TGGAGAAGGAACATAGCATTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAG AGGGGGTGCGTAGACCACGTGTTCACGGTAGGGAGAATCATCCAAGGTAG AAAGAGGGCGGGAAAGCCGACGTACTGCTTCTTCCTGGACGTGAAAAGGC ATAAGACACCGTATGAAGAAATGGGCTGTGGAAATAAGTGTCCAAGTACG GGACCAAGGGGAAAATGTGGAGAGAGCTGA back to top
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