Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 6669.EFX68856 |
| ProteomeId | EsuBft995_10 |
| Protein domains | IPR004875 |
| Protein domains | PTHR19303 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | jerky protein homolog-like os:homo sapiens gn:jrkl pe:2 sv:2 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 33208|Metazoa |
| Length | 1932 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.53e-70 |
| EggNOG OGs | KOG3105@1|root,KOG3105@2759|Eukaryota,38HJW@33154|Opisthokonta,3BCG5@33208|Metazoa,3CXR0@33213|Bilateria,420II@6656|Arthropoda |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Jerky protein homolog-like |
| COG category | BD |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft995_10a-0001 ID=EsuBft995_10a-0001|Name=EsuBft995_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1932bp|location=Sequence derived from alignment at Scaffold_444:75610..78546+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTGAAGCTGATGGATCAGAAGGTGACTCATGAGCAGCTAGCAGATCG
CTTCAAGTGCTCGGAACGGTTGGTCCGGGATGTGAAGAAGAACAGGAAGA
AGTACGAGACCGAGGCTGCTGCAGGACGCGGAGGAAGCAAGAAAAACGTG
CGCACAGGCAATAATCCGGAGGTGGACGCCATAGCTCTTGACCTACTAGA
GAAAGCCCGGAAGACCAAGATGCCCGTCACGCGCGACGTCCTTCGAAGCT
TCGGCCGTGCCGCCAGGGCAACCCTGCTGGCTGATCCAGCAGCTTCTAAG
GAAGTGAAGGCGAGGGTCGAGGATTTCAAGGCCGGCGAAAGGTGGGCCAG
GAACTTCGTGAAGCGCAACAGCATCGACAGCGTGAGACTTCATGGCGAGG
CTGGTAGCGTCAACAAGGAGGCCATCAAGGAAGCCATGGAGGAACTCAAG
GCCCTTTGCGCAAAGTACCCGGCTAGGCTCATCTTTAACGTCGACGAGAC
AGGCCTCCAGTGGAAGCTCATGCCCAGGCGCACGTACCTCTCCAACTTGG
AGGATCGGAAGACGGCGCGGGGCTCCAAGGGCATGTTCTTCAAGGATCGA
CTGTCTGCCATCATGTGCGCCAATGCCGACGGCACTGCAAAGGTTGACAT
GTCCATCATCGGGAAGGCAAAGGGTCCCCGCTGCTTCAACGACACGCCTT
CACCTCTCAAGTACTTCTCGAAGGCCAACGCCTGGTCCGACACCGCGACT
TTCCGCAAGTGGTGGTGTGAGGTCTTCCTCCCGTTCGTTCGGCGCTTCAC
TCACGAACCTGTGCTGCTTCTGATGGACGGCTGTGCTTCTCACGGTGATC
TAGTGGATGATCGGGGGCAAGTTACCATCAAGTTCTACCCTCCAAACTGC
ACCTCCGTACACCAGCCTATGGATCTGGGGATCATCGCCGAGACAAAGTG
CAACTACAGGAAGGAGCTGCTCGATGTGAAGACATCGACCATGTTGGTGG
CTGACACCCTTCGTGCCGAGGCCAAAGCTCGCAAAATGAAGGCCGGGACA
ATGGGGCTGGCGCAAGGGCACCAACCTCACGTGCGGGATGCCGCTGAACT
TCTCCAGAAAGCATGGGCCAGCGTCACCGCCCAGGACATCGCCAGGTGCT
TTGTCAAAGCCGAGACTCTTCCGGACGAGATGGCCGCTGAGCTCACCAAG
CAATACGGAAAGTCCCAGTTCCACGTCGCCGAGCCTACCTTGAAGGCTCT
CACGGAGACTCTCAACACGTTGAGCACGAGCGTGCACGAGGCGCACAAGC
AGGGTACCCAAATCGAGGACGAGGACATCGCCGAACTCATCGCCGAACTC
CGCATCGAACCCGGAAAGCCGCTCCTGGAGGAAGCGGTGAACGCGATTCA
AGGGTGGGCTACCATCGAGGACGACGATGAAGTGGTTGAGGCTCTCAGAG
AGGATACGGTGGAAGACATGACGGCACAGCTGGCTGGGACTCGAGTGTCT
ACCGGCCGCGAGGAGGAGGACGAGGAGGAGGACAGCGGCGATGACAACAC
GGGGCTCGCGCGCCGTGTCCCACCGGCTTATGGTGAACTGTCGTCTCACT
TCGGCGTCCTGGAAGCGGCAGCAGAGGAGAGCGGCAATGGAGACGCGGCG
CTCTACCTAGCGAAAGCGAAGATGGCGATGATTGCAGCGCATTCCAAGAG
GCGGGTGCGCCAGGCAGACATGAGGGAGTTTGTTGCTACGGAGTAAGGGC
GGGGAACAGCTGTGGCACTAAAAAAACGGTTGTTTGATTTTTGCGGTGCG
CTGCCCGTCGTGCATGTCATTTTTTTTTTCTTGCAACATCGAAGCGGGTG
CGCCAGGCAAACAGGAGAGAATTTGTCCCGACGACATACAGTAATAGTGT
CGATCCATTTCGTTCTTTGTTGGCCCCGTAAG back to topprotein sequence of EsuBft995_10a-0001 >EsuBft995_10 ID=EsuBft995_10|Name=EsuBft995_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=581bp
MLKLMDQKVTHEQLADRFKCSERLVRDVKKNRKKYETEAAAGRGGSKKNV
RTGNNPEVDAIALDLLEKARKTKMPVTRDVLRSFGRAARATLLADPAASK
EVKARVEDFKAGERWARNFVKRNSIDSVRLHGEAGSVNKEAIKEAMEELK
ALCAKYPARLIFNVDETGLQWKLMPRRTYLSNLEDRKTARGSKGMFFKDR
LSAIMCANADGTAKVDMSIIGKAKGPRCFNDTPSPLKYFSKANAWSDTAT
FRKWWCEVFLPFVRRFTHEPVLLLMDGCASHGDLVDDRGQVTIKFYPPNC
TSVHQPMDLGIIAETKCNYRKELLDVKTSTMLVADTLRAEAKARKMKAGT
MGLAQGHQPHVRDAAELLQKAWASVTAQDIARCFVKAETLPDEMAAELTK
QYGKSQFHVAEPTLKALTETLNTLSTSVHEAHKQGTQIEDEDIAELIAEL
RIEPGKPLLEEAVNAIQGWATIEDDDEVVEALREDTVEDMTAQLAGTRVS
TGREEEDEEEDSGDDNTGLARRVPPAYGELSSHFGVLEAAAEESGNGDAA
LYLAKAKMAMIAAHSKRRVRQADMREFVATE back to topmRNA from alignment at Scaffold_444:75610..78546+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft995_10a-0001 ID=EsuBft995_10a-0001|Name=EsuBft995_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2937bp|location=Sequence derived from alignment at Scaffold_444:75610..78546+ (Ectocarpus subulatus male Bft15b)
ATGCTGAAGCTGATGGATCAGAAGGTGACTCATGAGCAGCTAGCAGATCG
CTTCAAGTGCTCGGAACGGTTGGTCCGGGATGTGAAGAAGAACAGGAAGA
AGTACGAGACCGAGGCTGCTGCAGGACGCGGAGGAAGCAAGAAAAACGTG
CGCACAGGCAATAATCCGGAGGTGCGCTACTCTGCTGTTGTTTTAAAAAA
ATACGCGTAGTTCCCGCGCCTTCTTTGCCTTTTTTTTTTTGCCGGGCCTT
GTTTGCAAAGAGTTTTCGTTTTTGCAAGGACCTTTTTCTGTAGCCTTGTT
CGTCTATCTGATGTTCTTGTTCTTTTTTCTTCTTCTCTTGTCAAGTTGTT
CCCTGTTCTCTGTTCCCTTTCCCCATGTTTCTTCTATTTCTCGACTGTTA
CAGTACTTGTTGAGCTTATTCCCTCTCGTCGTTCGTTTGTGTCTTTTTTT
GTGTTACCTTTTTTTTCAACTTTCTTTGTTGTTTTATCGTTCGTGCGCTG
CTGCGCCAGCATATAAACTGCGAACCAAAAATGTGTACTTGTTTGTACTG
TACTGGTACATTACATCGCACGCACACCTATTCTTTCAAACGAGTTACAA
TACATAAATACACATGCGGATGCAGCGGCGAGCTTCTGTGGTTTTTCAAA
TGCCCGGAAATGTTTCCTTCCCACTACGATGCACTGTGCAACGAGGCTTA
ATGTTCGAAACTAATCGTGCTATCTTTTGTACCCTCTTTATTGTTTACTC
CTCGTTTGACGGTCAATAGGTGGACGCCATAGCTCTTGACCTACTAGAGA
AAGCCCGGAAGACCAAGATGCCCGTCACGCGCGACGTCCTTCGAAGCTTC
GGCCGTGCCGCCAGGGCAACCCTGCTGGCTGATCCAGCAGCTTCTAAGGA
AGTGAAGGCGAGGGTCGAGGATTTCAAGGCCGGCGAAAGGTGGGCCAGGA
ACTTCGTGAAGCGCAACAGCATCGACAGCGTGAGACTTCATGGCGAGGCT
GGTAGCGTCAACAAGGAGGCCATCAAGGAAGCCATGGAGGAACTCAAGGC
CCTTTGCGCAAAGTACCCGGCTAGGCTCATCTTTAACGTCGACGAGACAG
GCCTCCAGTGGAAGCTCATGCCCAGGCGCACGTACCTCTCCAACTTGGAG
GATCGGAAGACGGCGCGGGGCTCCAAGGGCATGTTCTTCAAGGATCGACT
GTCTGCCATCATGTGCGCCAATGCCGACGGCACTGCAAAGGTTGACATGT
CCATCATCGGGAAGGCAAAGGGTCCCCGCTGCTTCAACGACACGCCTTCA
CCTCTCAAGTACTTCTCGAAGGCCAACGCCTGGTCCGACACCGCGACTTT
CCGCAAGTGGTGGTGTGAGGTCTTCCTCCCGTTCGTTCGGCGCTTCACTC
ACGAACCTGTGCTGCTTCTGATGGACGGCTGTGCTTCTCACGGTGATCTA
GTGGATGATCGGGGGCAAGTTACCATCAAGTTCTACCCTCCAAACTGCAC
CTCCGTACACCAGCCTATGGATCTGGGGATCATCGCCGAGACAAAGTGCA
ACTACAGGAAGGAGCTGCTCGATGTGAAGACATCGACCATGTTGGTGGCT
GACACCCTTCGTGCCGAGGCCAAAGCTCGCAAAATGAAGGCCGGGACAAT
GGGGCTGGCGCAAGGGCACCAACCTCACGTGCGGGATGCCGCTGAACTTC
TCCAGAAAGCATGGGCCAGCGTCACCGCCCAGGACATCGCCAGGTGAGGT
TTGAGCATGTGCAATCGCTGTTTATAATGTAAACTGTTCAACTCGCGCCT
TGGTGCACATAGCTTTGGTGGTACAAAGGTAACGTGGGTAAGGTTGTACG
GATAGATTATATTGTTTTCGACTGAGTTTTCCAACATCCGAATACATATC
TTCTTTGCTTTTCGCAAAAACTTGAGTCCTCCCCCGCCTATGAGTCTTTG
ATCGTCCCTGGGTTCATCTAACATCCGCTTGTTGTCCACCCACAAACGTA
TGCATGACATTTTCTGCGCTACCTGGGATCAGGTGCTTTGTCAAAGCCGA
GACTCTTCCGGACGAGATGGCCGCTGAGCTCACCAAGCAATACGGAAAGT
CCCAGTTCCACGTCGCCGAGCCTACCTTGAAGGCTCTCACGGAGACTCTC
AACACGTTGAGCACGAGCGTGCACGAGGCGCACAAGCAGGGTACCCAAAT
CGAGGACGAGGACATCGCCGAACTCATCGCCGAACTCCGCATCGAACCCG
GAAAGCCGCTCCTGGAGGAAGCGGTGAACGCGATTCAAGGGTGGGCTACC
ATCGAGGACGACGATGAAGTGGTTGAGGCTCTCAGAGAGGATACGGTGGA
AGACATGACGGCACAGCTGGCTGGGACTCGAGTGTCTACCGGCCGCGAGG
AGGAGGACGAGGAGGAGGACAGCGGCGATGACAACACGGGGCTCGCGCGC
CGTGTCCCACCGGCTTATGGTGAACTGTCGTCTCACTTCGGCGTCCTGGA
AGCGGCAGCAGAGGAGAGCGGCAATGGAGACGCGGCGCTCTACCTAGCGA
AAGCGAAGATGGCGATGATTGCAGCGCATTCCAAGAGGCGGGTGCGCCAG
GCAGACATGAGGGAGTTTGTTGCTACGGAGTAAGGGCGGGGAACAGCTGT
GGCACTAAAAAAACGGTTGTTTGATTTTTGCGGTGCGCTGCCCGTCGTGC
ATGTCATTTTTTTTTTCTTGCAACATCGAAGCGGGTGCGCCAGGCAAACA
GGAGAGAATTTGTCCCGACGACAGTACACAAATAAGCAAATAAGTGAGGT
GCAGAAGAAAATGAAGAACCAAAGAGCGCCCCAAGACAACAAAAAGAAAA
CTCAACTCTGCCCACGCCCATGCTGGAACTTCACTCAACAGTACAGTAAT
AGTGTCGATCCATTTCGTTCTTTGTTGGCCCCGTAAG back to topCoding sequence (CDS) from alignment at Scaffold_444:75610..78546+ >EsuBft995_10a-0001 ID=EsuBft995_10a-0001|Name=EsuBft995_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1746bp|location=Sequence derived from alignment at Scaffold_444:75610..78546+ (Ectocarpus subulatus male Bft15b)
ATGCTGAAGCTGATGGATCAGAAGGTGACTCATGAGCAGCTAGCAGATCG
CTTCAAGTGCTCGGAACGGTTGGTCCGGGATGTGAAGAAGAACAGGAAGA
AGTACGAGACCGAGGCTGCTGCAGGACGCGGAGGAAGCAAGAAAAACGTG
CGCACAGGCAATAATCCGGAGGTGGACGCCATAGCTCTTGACCTACTAGA
GAAAGCCCGGAAGACCAAGATGCCCGTCACGCGCGACGTCCTTCGAAGCT
TCGGCCGTGCCGCCAGGGCAACCCTGCTGGCTGATCCAGCAGCTTCTAAG
GAAGTGAAGGCGAGGGTCGAGGATTTCAAGGCCGGCGAAAGGTGGGCCAG
GAACTTCGTGAAGCGCAACAGCATCGACAGCGTGAGACTTCATGGCGAGG
CTGGTAGCGTCAACAAGGAGGCCATCAAGGAAGCCATGGAGGAACTCAAG
GCCCTTTGCGCAAAGTACCCGGCTAGGCTCATCTTTAACGTCGACGAGAC
AGGCCTCCAGTGGAAGCTCATGCCCAGGCGCACGTACCTCTCCAACTTGG
AGGATCGGAAGACGGCGCGGGGCTCCAAGGGCATGTTCTTCAAGGATCGA
CTGTCTGCCATCATGTGCGCCAATGCCGACGGCACTGCAAAGGTTGACAT
GTCCATCATCGGGAAGGCAAAGGGTCCCCGCTGCTTCAACGACACGCCTT
CACCTCTCAAGTACTTCTCGAAGGCCAACGCCTGGTCCGACACCGCGACT
TTCCGCAAGTGGTGGTGTGAGGTCTTCCTCCCGTTCGTTCGGCGCTTCAC
TCACGAACCTGTGCTGCTTCTGATGGACGGCTGTGCTTCTCACGGTGATC
TAGTGGATGATCGGGGGCAAGTTACCATCAAGTTCTACCCTCCAAACTGC
ACCTCCGTACACCAGCCTATGGATCTGGGGATCATCGCCGAGACAAAGTG
CAACTACAGGAAGGAGCTGCTCGATGTGAAGACATCGACCATGTTGGTGG
CTGACACCCTTCGTGCCGAGGCCAAAGCTCGCAAAATGAAGGCCGGGACA
ATGGGGCTGGCGCAAGGGCACCAACCTCACGTGCGGGATGCCGCTGAACT
TCTCCAGAAAGCATGGGCCAGCGTCACCGCCCAGGACATCGCCAGGTGCT
TTGTCAAAGCCGAGACTCTTCCGGACGAGATGGCCGCTGAGCTCACCAAG
CAATACGGAAAGTCCCAGTTCCACGTCGCCGAGCCTACCTTGAAGGCTCT
CACGGAGACTCTCAACACGTTGAGCACGAGCGTGCACGAGGCGCACAAGC
AGGGTACCCAAATCGAGGACGAGGACATCGCCGAACTCATCGCCGAACTC
CGCATCGAACCCGGAAAGCCGCTCCTGGAGGAAGCGGTGAACGCGATTCA
AGGGTGGGCTACCATCGAGGACGACGATGAAGTGGTTGAGGCTCTCAGAG
AGGATACGGTGGAAGACATGACGGCACAGCTGGCTGGGACTCGAGTGTCT
ACCGGCCGCGAGGAGGAGGACGAGGAGGAGGACAGCGGCGATGACAACAC
GGGGCTCGCGCGCCGTGTCCCACCGGCTTATGGTGAACTGTCGTCTCACT
TCGGCGTCCTGGAAGCGGCAGCAGAGGAGAGCGGCAATGGAGACGCGGCG
CTCTACCTAGCGAAAGCGAAGATGGCGATGATTGCAGCGCATTCCAAGAG
GCGGGTGCGCCAGGCAGACATGAGGGAGTTTGTTGCTACGGAGTAA back to top
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