Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft468_3 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 9 |
| Length | 144 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft468_3a-0001 ID=EsuBft468_3a-0001|Name=EsuBft468_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1443bp|location=Sequence derived from alignment at Scaffold_189:351229..355526+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGGCCACCCAAGACATCGACATTGAGCTTCTTCGATCCCTCGTGGA
GGTAGCCATGATGAAGGGCTTCCGCGGCGGGAAGCTCGAGGAGGCTATCG
CGGCGGTGGCGCAGTACGACCGCCAGCAGGCTGTCGTTGCGATGATGAGG
AGCCTTCCCGAACGGCTGATGTCCAAGGCGGCCGAGGTTGCTCGCGACGT
CAGGAGGCGCTCCGACATCCAGCTCAGCCAGATCGCTGGGCTGGAGGAGG
AGGTGCTTCTGCTGGCCTCGACCGTAAAGGGGCTGCAGCACTCGGCCGCG
ATCGACGCCGCCCGCTTGGCGTCGGAGAGGACGGCTGCCAAGGCCGCCAG
CGACGACGCTGCTGCGCTCGCTCAAACCCTCCGAGCCGACGTCAAGAGGC
TGCAAGACACGGTCGTCAACCTAGAGACCGTTGCCGCTACTGACGCGGCG
AAGTTCCTCACGACGGAGGTCGACCTTCGCGCCGAGCTCGTCGCCGCTGA
CGGCACGATCGACTCCCTCAAGTCCACCGTGCGACAACAGCGCCAAGACC
TTGCGTCGTGCCAGCACGACATGGCAGAAGTGGACGAGGCGTCGTTCACC
CTCTCCCTCTTGGCGGGAGAGAGCACGCACCTCCTCAGAGGGGGTCTCCA
GCCGGCTACCCCCAGGCCTGCGGAGGCCACCACGTGGGCAGCGGCCGGCC
TGTCGGCAGCTCACGAGGCGCGTCAACGCACGTGCGGGCATGAGGAAGAA
GAGCGGCAGCGTCAGGCCCTCGAAGAGGAGATGGTGGACCTCCAGAACGA
AGTGGACGAGGCGGAGACGGCTGCCGATTCGTGTGCGGCCAGCCTGGAGA
AACTCGACGAGCAGACTGTTGCCGTTCTGACCGCGGTCGAGAAGACCGTT
GGCGCTCAGAGCACTCGCTTGGGGGAGATCGGAGACGTGGCGCTGTCCTT
CACCAGGCAGCTGCTGGACGACCTCTCCGGCTGCCGGCAACAGGTCGTAG
AAGTGGAGGAGAGGGCGATGGACCGCCTGGAGGAGACGATGGCCTCTGAG
GAAGAGTCTACATACATGCACAGCAGCGCTTCATGTGTTCAAGCATGCCT
TGAGCGGTCGCAACATCATCGCCGGGAGAGATCCAGCGGTGAGTTTGTAC
ACAGAAGGGGGGCTCGCGAGACCCAAGCGGCGTTTCGGGCGTGCGCAGCG
GGGCTCGAGCGACTGGATTCCCAGTCGCTAGACCTCGCCCGCTTCTTGGC
CGACAAGGCCATGCAAGCGGGAGCACCGGTGTCCATTGCGAATGCAGTGG
AGGCACCCAAGCCGCCGGGGTACGGCTTGCTGGACTCCTTATTCCGCCCA
CGGGGTGTCAGCGATGATGCCATGGTGAAGATAGTCCCGTCGCGAGTCGG
GTAAGCATTCTTATGCGTTGTTGGATGCAAGGGGAGAGTGCAT back to topprotein sequence of EsuBft468_3a-0001 >EsuBft468_3 ID=EsuBft468_3|Name=EsuBft468_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=467bp
MKATQDIDIELLRSLVEVAMMKGFRGGKLEEAIAAVAQYDRQQAVVAMMR
SLPERLMSKAAEVARDVRRRSDIQLSQIAGLEEEVLLLASTVKGLQHSAA
IDAARLASERTAAKAASDDAAALAQTLRADVKRLQDTVVNLETVAATDAA
KFLTTEVDLRAELVAADGTIDSLKSTVRQQRQDLASCQHDMAEVDEASFT
LSLLAGESTHLLRGGLQPATPRPAEATTWAAAGLSAAHEARQRTCGHEEE
ERQRQALEEEMVDLQNEVDEAETAADSCAASLEKLDEQTVAVLTAVEKTV
GAQSTRLGEIGDVALSFTRQLLDDLSGCRQQVVEVEERAMDRLEETMASE
EESTYMHSSASCVQACLERSQHHRRERSSGEFVHRRGARETQAAFRACAA
GLERLDSQSLDLARFLADKAMQAGAPVSIANAVEAPKPPGYGLLDSLFRP
RGVSDDAMVKIVPSRVG back to topmRNA from alignment at Scaffold_189:351229..355526+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft468_3a-0001 ID=EsuBft468_3a-0001|Name=EsuBft468_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4298bp|location=Sequence derived from alignment at Scaffold_189:351229..355526+ (Ectocarpus subulatus male Bft15b)
ATGAAGGCCACCCAAGACATCGACATTGAGCTTCTTCGATCCCTCGTGGA
GGTAGCCATGATGAAGGGCTTCCGCGGCGGGAAGCTCGAGGAGGCTATCG
CGGCGGTGGCGCAGTACGACCGCCAGCAGGCTGTCGTTGCGATGATGAGG
TGAGAGGGCAGTGTCACGTTGTTGTTTTTTTGCCCTTTGTCCGTCTGGTC
ACTCCTCCGATCATCAAAGTCCACGATTGATCATCAAATCGTGCTGTTTT
CCAAGGTCCTCCCCCCCGCCAACGGAGTCAAGGTCGGGAGCAATAGCTAG
CTCGGTGGGAGTCATGTACCGTGAGTCTCTGTGCTCGGTGCCATGTGCAG
TAGATGTAGCATGCGTGACTGCTGCGGTGTTACCGCGGTGCACGTTCGTG
GTGCGCCGTTTGTCCATCATTTCCATCATGGCGGAGGTTACGTAGATCGA
GCTGTTTCGTACAACACGTGCGCGTTCCTACGTAGCCGCCGTGTCTGAAG
GACCCGCACTGTTTTTTCCAATCCGCCGTCTGGTACTTCCGCATCGATGC
CGTTTCCGTTCTTGGAATTTGTTTTCAGGAGCCTTCCCGAACGGCTGATG
TCCAAGGCGGCCGAGGTTGCTCGCGACGTCAGGGTAAGCCCTATCTCGTC
CATCCACTAGAGTGATGGATTGCTGAGTGCGGTATAGACGTCTCCGGCAG
TTCCCATGAGCTGCTATTTTTACAAAGGCAACACAAAAATAGCCTGAGAC
AACATTTCGCTTCGCGGTACACCCCATCGTGGTTATGTGTGTTACCATGT
CACCGCTCGCTGTAGTGTACACTCGGAGTAACGAACGTGGTACCGTGAAA
CCGTCGTGATGTGTACGTGTCCTTCCTTCAGTGGACGCCACCCCCCACCC
CCCCCCAATAGACGACAAACCGTGTTTCACAACAACCGTCGAGAAACCGC
AGGCTTTTTTTTTGCGCCAGGCAGTGTGTCGCTCCGTGGAATCACAGGAA
TATCCATCGCACACACGCTCGCATTCCGGCAGCGTTGTTGCCGCTCTTGT
TGCTGTTGCGGTTTCTTGGCGTAGTTGTTGTCGGTGTCTTTACAGTTGCT
CCGAAGTTTCTCCTCCACACTCACACGCCCCTTCTTCTTCCATTTCCACC
CGCCATGATACGTGGTAACGTGCCGCCAGAGGCGCTCCGACATCCAGCTC
AGCCAGATCGCTGGGCTGGAGGAGGAGGTGCTTCTGCTGGCCTCGACCGT
AAAGGGGCTGCAGCACTCGGCCGCGATCGACGCCGCCCGCTTGGCGTCGG
AGAGGACGGCTGCCAAGGCCGCCAGCGACGACGCTGCTGCGCTCGCTCAA
ACCCTCCGAGCCGACGTCAAGAGGCTGCAAGACACGGTCGTCAACCTAGA
GACCGTTGCCGCTACTGACGCGGCGAAGTTCCTCACGACGGAGGTCGACC
TTCGCGCCGAGCTCGTCGCCGCTGACGGCACGATCGACTCCCTCAAGTCC
ACCGTGCGACAACAGCGCCAAGACCTTGCGTCGTGCCAGCACGACATGGC
AGAAGTGGACGAGGCGTCGTTCACCCTCTCCCTCTTGGCGGGAGAGAGCA
CGCACCTCCTCAGAGGGGGTCTCCAGCCGGCTACCCCCAGGCCTGCGGAG
GCCACCACGTGGGCAGCGGCCGGCCTGTCGGCAGCTCACGAGGCGCGTCA
ACGCACGTGGTGAGCGAGCTCTTCAGCGTGCTAGCGCCCCCACGTAAATT
GTGGTAATTTGGCGCGGATCTACGCGGTGTCGGTGGTGCTTGTTGTTTGT
GGTTCGTTTGGTTGTTGATGATGAGGTTGGAATTGGCGCTTGGTTCCGAT
GATTTGTCGACCCCTCTCTCACCGTTGGTGTACAGTAGCAGGGAGTGTTT
GATGTCGATGGCTAAAGGTTGTTCGTGTAGCGGGGTACAGGATGAACTTG
AAATGTTGAACCGAGGGTGTGCTGGTATTTACGAATTCTTTCCCTATCGA
GGAACCATCAAGGCAATCTCGGCTTGCCGCAGGTGGACAGCAACATGTCC
ACTCGTCAACCTTTACACCACGTTGTGCGATTTGATGCGAAATATGAAAT
GGCTCTGCCTCTGTTGCGATTGAGTTGCGGCGGCTCTCACTCAAATCCTT
GACGGTGTCAACACTCCCGATCCTCCTGATTCGAATAACAGCCAAGCCGT
TCATGTTCAAGCCGGCCCGGTCGGTACTCCTATTGTCAAGGTACTCCTAT
TGCCATTCTTGTTTCAGGGCGTTGCTCCCCGCTGTATCTCACAATGCCCT
GACCCCGCAGTGACCGGGCATCAACAGCAGAGCGTGTGCCCATTCTCTCC
CTGCTTGTGGTGTGTTGCAGTGCTCGCCTGGATGGAGTCGCGACGACGAT
CTACTCCTTCTCGGCCAAGCATGAGGAAGAAGAGCGGCAGCGTCAGGCCC
TCGAAGAGGAGATGGTGGACCTCCAGAACGAAGTAAGTACCCCGTCTGAG
TTTTTTTTAGTGTTTTTGGACGCGTGCTGCTGTCTGCAGTGCAGTGATGT
GTAGTGTATGGCCTGAAAGACCGAGAACAACCATCGAAGGGAAGACAGCA
ACCCTCTTGACCCTCATCGCTCACCCGCTCTCCGCCCTCCCCACACCGCA
ATCTCGCCACTGCCTTTGTTTTGGCTCGAAATCTGGTCGCCGTTAACCGT
GCGCAGGTGGACGAGGCGGAGACGGCTGCCGATTCGTGTGCGGCCAGCCT
GGAGAAACTCGACGAGCAGACTGTTGCCGTTCTGACCGCGGTCGAGAAGA
CCGTTGGCGCTCAGAGGTGGGGCGGGGAAGGGAGCGTCTCCTCCGCGGCA
ACCTACGACAAGATCCGGTACGTCCTCGTCGTTGTTTCCGGTTGACCTCA
AGGGGGGGGGGCACGTGATGGGGCAATAGTGTCGGTTTGGCAGTGACTAC
CGTTGGTGTCGTTGTGCTTGGCGATGGTTGCTCGTGAAAGCGTTGTTGCT
GCTGTCACTAGCCAGTTGTTTCTGTAGTTTGTGCGGGCGGACCCGTGCAG
TCTCGACGACCTGTTTGGTAACATGGGAGCCATTTGGGGAGATATGTTCA
CCCAGGATTGAAGTCCTGATCGTTGTGGAGCGTCCCGCTCGCGCCGTGTG
TTGCTTGGTCCCGACAACTTTCGACAGTTGCTAGCCGCAATTTTCATGGT
CGGGCCTAGGTGTTTGCACGACCAAACGAACCCTGGACACCCCCTGCCGC
CCTCTGTCTTGAAATGAGGCGAGAGGCTAGAGGAGGGGCGACAGAAGCAA
GCAGTAGCCGTGGCCCTCCCCTTCACCCTCCGCTCCCTCGTCTCGGCTGC
TTCGATGCTCTTCATTTAGCACTCGCTTGGGGGAGATCGGAGACGTGGCG
CTGTCCTTCACCAGGCAGCTGCTGGACGACCTCTCCGGCTGCCGGCAACA
GGTCGTAGAAGTGGAGGAGAGGGCGATGGACCGCCTGGAGGAGACGATGG
CCTCTGAGGAAGAGGTATGCATCAGATGCACCTGCCTGAGCGTGACGCCA
AGGGTACTGTACCGTGTGTCACTCTATTGCTGGTATCAGGGTGATCAATC
ACGGGGCCCGACTATTCCGATCAATAGTCTACATACATGCACAGCAGCGC
TTCATGTGTTCAAGCATGCCTTGAGCGGTCGCAACATCATCGCCGGGAGA
GATCCAGCGGTGAGTTTGTACACAGAAGGGGGGTGGGGGAAAGTGATGCT
CGATGTCACCCTTTGGCATCGAACGAAATAGGCAGTGGATCATGGATCAT
GCGTTGGGAATGGGGGGAGGGGGGGGTACATACACGCTTGTCGAACCTGT
TGGTATTGGGGTGCATGGGCAGCCCACCGTCCGTGGATAGATAGCACAGC
CCGACCCCCGGAGAGCCAGTCATGAAGAGAGCGACTCTGTAACCCCCGTC
TACAAGCCGTCGGCCCCTACCGCTGTGTCTCGTTGGTTGTTTTTGTGCGA
CTCTCACTTGTAACAGGCTCGCGAGACCCAAGCGGCGTTTCGGGCGTGCG
CAGCGGGGCTCGAGCGACTGGATTCCCAGTCGCTAGACCTCGCCCGCTTC
TTGGCCGACAAGGCCATGCAAGCGGGAGCACCGGTGTCCATTGCGAATGC
AGTGGAGGCACCCAAGCCGCCGGGGTACGGCTTGCTGGACTCCTTATTCC
GCCCACGGGGTGTCAGCGATGATGCCATGGTGAAGATAGTCCCGTCGCGA
GTCGGGTAAGCATTCTTATGCGTTGTTGGATGCAAGGGGAGAGTGCAT back to topCoding sequence (CDS) from alignment at Scaffold_189:351229..355526+ >EsuBft468_3a-0001 ID=EsuBft468_3a-0001|Name=EsuBft468_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1404bp|location=Sequence derived from alignment at Scaffold_189:351229..355526+ (Ectocarpus subulatus male Bft15b)
ATGAAGGCCACCCAAGACATCGACATTGAGCTTCTTCGATCCCTCGTGGA
GGTAGCCATGATGAAGGGCTTCCGCGGCGGGAAGCTCGAGGAGGCTATCG
CGGCGGTGGCGCAGTACGACCGCCAGCAGGCTGTCGTTGCGATGATGAGG
AGCCTTCCCGAACGGCTGATGTCCAAGGCGGCCGAGGTTGCTCGCGACGT
CAGGAGGCGCTCCGACATCCAGCTCAGCCAGATCGCTGGGCTGGAGGAGG
AGGTGCTTCTGCTGGCCTCGACCGTAAAGGGGCTGCAGCACTCGGCCGCG
ATCGACGCCGCCCGCTTGGCGTCGGAGAGGACGGCTGCCAAGGCCGCCAG
CGACGACGCTGCTGCGCTCGCTCAAACCCTCCGAGCCGACGTCAAGAGGC
TGCAAGACACGGTCGTCAACCTAGAGACCGTTGCCGCTACTGACGCGGCG
AAGTTCCTCACGACGGAGGTCGACCTTCGCGCCGAGCTCGTCGCCGCTGA
CGGCACGATCGACTCCCTCAAGTCCACCGTGCGACAACAGCGCCAAGACC
TTGCGTCGTGCCAGCACGACATGGCAGAAGTGGACGAGGCGTCGTTCACC
CTCTCCCTCTTGGCGGGAGAGAGCACGCACCTCCTCAGAGGGGGTCTCCA
GCCGGCTACCCCCAGGCCTGCGGAGGCCACCACGTGGGCAGCGGCCGGCC
TGTCGGCAGCTCACGAGGCGCGTCAACGCACGTGCGGGCATGAGGAAGAA
GAGCGGCAGCGTCAGGCCCTCGAAGAGGAGATGGTGGACCTCCAGAACGA
AGTGGACGAGGCGGAGACGGCTGCCGATTCGTGTGCGGCCAGCCTGGAGA
AACTCGACGAGCAGACTGTTGCCGTTCTGACCGCGGTCGAGAAGACCGTT
GGCGCTCAGAGCACTCGCTTGGGGGAGATCGGAGACGTGGCGCTGTCCTT
CACCAGGCAGCTGCTGGACGACCTCTCCGGCTGCCGGCAACAGGTCGTAG
AAGTGGAGGAGAGGGCGATGGACCGCCTGGAGGAGACGATGGCCTCTGAG
GAAGAGTCTACATACATGCACAGCAGCGCTTCATGTGTTCAAGCATGCCT
TGAGCGGTCGCAACATCATCGCCGGGAGAGATCCAGCGGTGAGTTTGTAC
ACAGAAGGGGGGCTCGCGAGACCCAAGCGGCGTTTCGGGCGTGCGCAGCG
GGGCTCGAGCGACTGGATTCCCAGTCGCTAGACCTCGCCCGCTTCTTGGC
CGACAAGGCCATGCAAGCGGGAGCACCGGTGTCCATTGCGAATGCAGTGG
AGGCACCCAAGCCGCCGGGGTACGGCTTGCTGGACTCCTTATTCCGCCCA
CGGGGTGTCAGCGATGATGCCATGGTGAAGATAGTCCCGTCGCGAGTCGG
GTAA back to top
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