EsuBft359_10a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft359_10a-0001
Unique Name	EsuBft359_10a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_233:264811..266299-
coding sequence from alignment at Scaffold_233:264811..266299-

spliced messenger RNA

>EsuBft359_10a-0001 ID=EsuBft359_10a-0001|Name=EsuBft359_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1489bp|location=Sequence derived from alignment at Scaffold_233:264811..266299- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ACCAGTTTCGGAAGGGGGCGGTTTGCACGCGCACACGGCAAGGTCCGTGC
TGTGGGGTTGACCGAGGGGGTGGTGCAGTGGATGTCATGGTGGAGCTGCT
TTCTCTGTATACCTTTTTGCCTTCGCATGCGCCTCTCGTGGCCTTTCGGT
GTTGGTCAGGGCCAGTGGGCCATGTGGACTAAGTGTCAAGCTACTGTGGC
TCTTCGCCAAGTGGTTGCGTTGGCGGGTTTGCAGCCCGAGGAGTACGCGC
TGCACTCCCTGAGAATTGGGGGCGCAACTTTCTTGGCGGCGGAGGGGGCT
TCGCCGGAGGTTCTCCGAAGAGAAGGGCGTTGGTCGGGGGAGAGTAGTCA
CCAGTGTTACGTTCGGAATGTTGGGGGTGACGCTTCGTGGGTGTCAGAGG
TGTTGGCGAACAAGGAGAAGGTGTCTACACAGCCAGGGCAGGGTACCCGA
TGGGGTGACGTGTGAAGGGGTTCCGTGGCACGTTGTGTATGTCGAGATCC
TTGTTGTACCGATGGTATTTTGCTGTACATATTGTATGCCGTATATCTTC
TCCCTTCTTCCCCTCGCTCCTCGACAAGCTTTTGCTTAGACATGGGTTGT
AGCGAAGGGGGGGGTCTTTCTGGCGAGCAGGGCTAGACTCACCCTCAANN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAGCCGCAGTCGGGGTTGCGTGTGCCTGTGCTGGGCGCAGTTCCG
AGGTGCTCGTCCCATTTATTTTTGGGTGGGATTTGTGTATATCGCATTTC
AGGTTTTATATGCAGGACGCATGTTGTTGGGTGTATCGGACCGTTGCATG
GTTGGGGGAGTGCACTCCTGGCTGCTGTGTGTGGCTATGTTGGTGCTACG
CGCTTCCCCGTTACGTGCGTGACGAGTCTGATTGATTGGTGGATACGCAT
ACATATTATATGGCTTATATGTGGGTGTCCTGGTGTCCGGGTACATGCGT
GTTTTTCTGCAGTGCGATCTGAAGGTCAGGGGAACAGAG

protein sequence of EsuBft359_10a-0001

>EsuBft359_10 ID=EsuBft359_10|Name=EsuBft359_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=127bp
MSWWSCFLCIPFCLRMRLSWPFGVGQGQWAMWTKCQATVALRQVVALAGL
QPEEYALHSLRIGGATFLAAEGASPEVLRREGRWSGESSHQCYVRNVGGD
ASWVSEVLANKEKVSTQPGQGTRWGDV

mRNA from alignment at Scaffold_233:264811..266299-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft359_10a-0001 ID=EsuBft359_10a-0001|Name=EsuBft359_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1489bp|location=Sequence derived from alignment at Scaffold_233:264811..266299- (Ectocarpus subulatus male Bft15b)
ACCAGTTTCGGAAGGGGGCGGTTTGCACGCGCACACGGCAAGGTCCGTGC
TGTGGGGTTGACCGAGGGGGTGGTGCAGTGGATGTCATGGTGGAGCTGCT
TTCTCTGTATACCTTTTTGCCTTCGCATGCGCCTCTCGTGGCCTTTCGGT
GTTGGTCAGGGCCAGTGGGCCATGTGGACTAAGTGTCAAGCTACTGTGGC
TCTTCGCCAAGTGGTTGCGTTGGCGGGTTTGCAGCCCGAGGAGTACGCGC
TGCACTCCCTGAGAATTGGGGGCGCAACTTTCTTGGCGGCGGAGGGGGCT
TCGCCGGAGGTTCTCCGAAGAGAAGGGCGTTGGTCGGGGGAGAGTAGTCA
CCAGTGTTACGTTCGGAATGTTGGGGGTGACGCTTCGTGGGTGTCAGAGG
TGTTGGCGAACAAGGAGAAGGTGTCTACACAGCCAGGGCAGGGTACCCGA
TGGGGTGACGTGTGAAGGGGTTCCGTGGCACGTTGTGTATGTCGAGATCC
TTGTTGTACCGATGGTATTTTGCTGTACATATTGTATGCCGTATATCTTC
TCCCTTCTTCCCCTCGCTCCTCGACAAGCTTTTGCTTAGACATGGGTTGT
AGCGAAGGGGGGGGTCTTTCTGGCGAGCAGGGCTAGACTCACCCTCAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAGCCGCAGTCGGGGTTGCGTGTGCCTGTGCTGGGCGCAGTTCCG
AGGTGCTCGTCCCATTTATTTTTGGGTGGGATTTGTGTATATCGCATTTC
AGGTTTTATATGCAGGACGCATGTTGTTGGGTGTATCGGACCGTTGCATG
GTTGGGGGAGTGCACTCCTGGCTGCTGTGTGTGGCTATGTTGGTGCTACG
CGCTTCCCCGTTACGTGCGTGACGAGTCTGATTGATTGGTGGATACGCAT
ACATATTATATGGCTTATATGTGGGTGTCCTGGTGTCCGGGTACATGCGT
GTTTTTCTGCAGTGCGATCTGAAGGTCAGGGGAACAGAG

Coding sequence (CDS) from alignment at Scaffold_233:264811..266299-

>EsuBft359_10a-0001 ID=EsuBft359_10a-0001|Name=EsuBft359_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=384bp|location=Sequence derived from alignment at Scaffold_233:264811..266299- (Ectocarpus subulatus male Bft15b)
ATGTCATGGTGGAGCTGCTTTCTCTGTATACCTTTTTGCCTTCGCATGCG
CCTCTCGTGGCCTTTCGGTGTTGGTCAGGGCCAGTGGGCCATGTGGACTA
AGTGTCAAGCTACTGTGGCTCTTCGCCAAGTGGTTGCGTTGGCGGGTTTG
CAGCCCGAGGAGTACGCGCTGCACTCCCTGAGAATTGGGGGCGCAACTTT
CTTGGCGGCGGAGGGGGCTTCGCCGGAGGTTCTCCGAAGAGAAGGGCGTT
GGTCGGGGGAGAGTAGTCACCAGTGTTACGTTCGGAATGTTGGGGGTGAC
GCTTCGTGGGTGTCAGAGGTGTTGGCGAACAAGGAGAAGGTGTCTACACA
GCCAGGGCAGGGTACCCGATGGGGTGACGTGTGA