Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1022_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 177 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1022_7a-0001 ID=EsuBft1022_7a-0001|Name=EsuBft1022_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1778bp|location=Sequence derived from alignment at Scaffold_103:270285..272298+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACGCCGAGATCGTCGACAGCCTCGCCTTCTCCTCCAGCCGCACGCTT
CGCCTGCTTCGGCGGCGGTATCCGTACCGTCATCTTCAACGAGCCTCCCG
CCCTGCTGCTGGTTCTGCTGCTGCCGCCGTTGATGCTTCGAGTGTTTGTT
TGAGGGATAGGATGGGGATGCCTTCAACATCGATGTCGATGGTGACGTCG
ACGAAACAGAAACTAACGCTTCTCCGCCATGTGCCACGTAGACAAGAGCT
GCTGTGTGGAGCCGGAGAATCGCATCGCGCGCGTCCTCTCCTCAGAAAAT
TACAGCGAAGGCGCGCGTTTGTTGACCTTGCTCGTGTATGTTTTTGTGTG
TGTTTTCGTCCTATTTATTATGGTGACAGTCCCCCCATTTTTCGTGATAA
GACGTGTACTACACTTTTCAGCGTAAACAACATATTATTATTATTTTATT
TGCCCTCCGACGATTGCAGATAAATGCAGACATACATAAAAAGTCGATCG
TGAAGGCCGTCATGCCAAGCCAAATTAACTCGATGCCCAATAGCCAGGAA
TGTTTGCCTCTAAAATCAACAAAACTTTGGTTGAAACACTACAGCTGAAC
TCTAGGCACGAACCATAGATGGAGAAAAATGAACAAAACCCCAACCTCAT
CCACCCGAAATCAAACAAAACTCGACCGCGTCTTCTCTGGTACCCCTGAC
ACCGTATCGAACAAAAATCCGCTTCCTACCGAAGTGGTTAGGTTAAAGCT
GTCGCACGCATATTTCGGCGCGCAAAAGTCTGTGCGGCATTGCTGATCGA
TACTGCCACCGGTCACACTAAGAGAGAAACATCCGCCGTCTTGCTCTTTC
TGAGGCACCCCCCACTCAAGCCCACGTTTCCCCAGACCTCCGACACTGCC
ACCCCTTGTTCCTACTTGCTCGCCACCTGCAACCACAAGGGTCAAGCCCT
CCCCCCTCAGCACCCCATATTGGTGAAATTGAGAGCGAAGTATGAAATTG
AGAGCGAGAGCCAAAAAAAAAAATCGGGTCCAGACGCCTCTTGCCATTTC
TTGGAAAGTAGGGGGGGCGGGCTCTTCCAAGAAGCGGCGCAAATTGAAGG
TCTCATCAGCAGCGACACGAGCATATGCATGTCATCGTCATCGGATGCTG
CAGCTAATAGGAGCTAGACAAGTGCTAGATTTCCCCAGATTGGCTATTCC
TGCCTCAAACTGTTGCAGGGCGGTATGGCCCCGGGCGGTGGGCTCTGCTG
AAGCTTCTGCTCGCCGCTGTAACTCCACATCGAGAGACTCCCACAGGATG
ACCAGGGTATCTGCTTGCAGCTACGGGCTGGCCCTTCAATTCAAGCTACA
CAGCAAGCTCCGCCTCTCAGCAGTAGTCCAGCTGCAGCGCATCGTGCAAT
CTCGCTCTCAATCAGATGCTTCGCTCTCAATATCACCTATGTTGCTGTAT
GTAGAGTCCGTCCGGTTAAATTTTGCCACCATCTCCTGAAATCACCTTGG
GAATTGTTTTGAGTGACTGACGTACCCCCTAGTGACATAGTACTTTATAT
CGTAAGAAAGCTCTGTTTCCGGCGGATCGTTTGGATGGAGCAGATTTTCT
TCTTTTTTTTGTTGGCGAGAAAATCACGATTCCGTGGAGATTTTGGACGA
TTTTGGTTAGTTTTATTTGGTCGAGTGTGAGGTCATATATTTTTTTTTAG
ACCGGTTTTGAACGTATCACGCCCAGGGGCTCACGGCGACACAACTCAGC
TTTATTTTCGCTAATAAACAACGGAGAT back to topprotein sequence of EsuBft1022_7a-0001 >EsuBft1022_7 ID=EsuBft1022_7|Name=EsuBft1022_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=50bp
MTPRSSTASPSPPAARFACFGGGIRTVIFNEPPALLLVLLLPPLMLRVFV back to topmRNA from alignment at Scaffold_103:270285..272298+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1022_7a-0001 ID=EsuBft1022_7a-0001|Name=EsuBft1022_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2014bp|location=Sequence derived from alignment at Scaffold_103:270285..272298+ (Ectocarpus subulatus male Bft15b)
ATGACGCCGAGATCGTCGACAGCCTCGCCTTCTCCTCCAGCCGCACGCTT
CGCCTGCTTCGGCGGCGGTATCCGTACCGTCATCTTCAACGAGCCTCCCG
CCCTGCTGCTGGTTCTGCTGCTGCCGCCGTTGATGCTTCGAGTGTTTGTT
TGAGGGATAGGATGGGGATGCCTTCAACATCGATGTCGATGGTGACGTCG
ACGAAACAGAAACTAACGCTTCTCCGCCATGTGCCACGTAGACAAGAGCT
GCTGTGTGGAGCCGGAGAATCGCATCGCGCGCGTCCTCTCCTCAGAAAAT
TACAGCGAAGGCGCGCGTTTGTTGACCTTGCTCGTGTATGTTTTTGTGTG
TGTTTTCGTCCTATTTATTATGGTGACAGTCCCCCCATTTTTCGTGATAA
GACGTGTACTACACTTTTCAGCGTAAACAACATATTATTATTATTTTATT
TGCCCTCCGACGATTGCAGATAAATGCAGACATACATAAAAAGTCGATCG
TGAAGGCCGTCATGCCAAGCCAAATTAACTCGATGCCCAATAGCCAGGAA
TGTTTGCCTCTAAAAGTCAACAAAACTTTGGTTGAAACACTACAGCTGAA
CTCTAGGCACGAACCATAGATGGAGAAAAATGAACAAAACCCCAACCTCA
TCCACCCGAAATCAAACAAAACTCGACCGCGTCTTCTCTGGTACCCCTGA
CACCGTATCGAACAAAAATCCGCTTCCTACCGAAGTGGTTAGGTTAAAGC
TGTCGCACGCATATTTCGGCGCGCAAAANCAGGAATGTTTGCCTCTAAAA
GTCAACAAAACTTTGGTTGAAACACTACAGCTGAACTCTAGGCACGAACC
ATAGATGGAGAAAAATGAACAAAACCCCAACCTCATCCACCCGAAATCAA
ACAAAACTCGACCGCGTCTTCTCTGGTACCCCTGACACCGTATCGAACAA
AAATCCGCTTCCTACCGAAGTGGTTAGGTTAAAGCTGTCGCACGCATATT
TCGGCGCGCAAAAGTCTGTGCGGCATTGCTGATCGATACTGCCACCGGTC
ACACTAAGAGAGAAACATCCGCCGTCTTGCTCTTTCTGAGGCACCCCCCA
CTCAAGCCCACGTTTCCCCAGACCTCCGACACTGCCACCCCTTGTTCCTA
CTTGCTCGCCACCTGCAACCACAAGGGTCAAGCCCTCCCCCCTCAGCACC
CCATATTGGTGAAATTGAGAGCGAAGTATGAAATTGAGAGCGAGAGCCAA
AAAAAAAAATCGGGTCCAGACGCCTCTTGCCATTTCTTGGAAAGTAGGGG
GGGCGGGCTCTTCCAAGAAGCGGCGCAAATTGAAGGTCTCATCAGCAGCG
ACACGAGCATATGCATGTCATCGTCATCGGATGCTGCAGCTAATAGGAGC
TAGACAAGTGCTAGATTTCCCCAGATTGGCTATTCCTGCCTCAAACTGTT
GCAGGGCGGTATGGCCCCGGGCGGTGGGCTCTGCTGAAGCTTCTGCTCGC
CGCTGTAACTCCACATCGAGAGACTCCCACAGGATGACCAGGGTATCTGC
TTGCAGCTACGGGCTGGCCCTTCAATTCAAGCTACACAGCAAGCTCCGCC
TCTCAGCAGTAGTCCAGCTGCAGCGCATCGTGCAATCTCGCTCTCAATCA
GATGCTTCGCTCTCAATATCACCTATGTTGCTGTATGTAGAGTCCGTCCG
GTTAAATTTTGCCACCATCTCCTGAAATCACCTTGGGAATTGTTTTGAGT
GACTGACGTACCCCCTAGTGACATAGTACTTTATATCGTAAGAAAGCTCT
GTTTCCGGCGGATCGTTTGGATGGAGCAGATTTTCTTCTTTTTTTTGTTG
GCGAGAAAATCACGATTCCGTGGAGATTTTGGACGATTTTGGTTAGTTTT
ATTTGGTCGAGTGTGAGGTCATATATTTTTTTTTAGACCGGTTTTGAACG
TATCACGCCCAGGGGCTCACGGCGACACAACTCAGCTTTATTTTCGCTAA
TAAACAACGGAGAT back to topCoding sequence (CDS) from alignment at Scaffold_103:270285..272298+ >EsuBft1022_7a-0001 ID=EsuBft1022_7a-0001|Name=EsuBft1022_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=153bp|location=Sequence derived from alignment at Scaffold_103:270285..272298+ (Ectocarpus subulatus male Bft15b)
ATGACGCCGAGATCGTCGACAGCCTCGCCTTCTCCTCCAGCCGCACGCTT
CGCCTGCTTCGGCGGCGGTATCCGTACCGTCATCTTCAACGAGCCTCCCG
CCCTGCTGCTGGTTCTGCTGCTGCCGCCGTTGATGCTTCGAGTGTTTGTT
TGA back to top
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