EsuBft1022_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1022_6a-0001 ID=EsuBft1022_6a-0001|Name=EsuBft1022_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=991bp|location=Sequence derived from alignment at Scaffold_103:264128..268530- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GCTGTTGCCGATCGGGCGATCGACACGGCCCAAGATATCTTGACGCACCC
CTCACGCGCCTTCATGCCGGCCGCCAAGATGAATCTGCCGCTCACCACTG
ACGGCATCGAGGATCCGTCGTGGCTGCCGGCCACCAAGAAGGAGCGGATC
GTCGTGCTGGGCATGGCCACGCCACCAGCAAGGTGGTGGTTGAATTGGCA
GCAAAACAAGCGGGAAGATCGGCAGCGACCGGTGAACCCCGACGATGCGA
GGCTTCTGATGGAGCTCTCCTACGACAAACTGGTGTACGCCATCGGAACA
GGAACGGGGACCTTCGGGGTCCCGGGGGTGCGAGAGAACTGCTACATGCT
CAAGGAGGCAAGCGACGCGCGACTGCTACGCGCCGCGATCGTTAACGTCC
TTGAGGAGGCGTGCTTGGCCGGGATGACGGACGAGGGGAAGGAAAAACTG
TTGTTCTTCGTGGGTAAGGGGTATTGTGGTGCGCCGTCACAGAACTTTCA
GAACTTTCGAGTTCTGTAAGCGAGCTGTCACAGAAAGTTCGGTAGGGTAC
TGGGGTCTGTCACAGAACTCACAGAGAAGTTCGGTAGGGTACTGGATCTG
TCACAGAACTCACAGAACTATAGGGTATTGTGGTGAGCCGTCACAGATCT
CACAGAACTTTCGAGTTCTGTAAGCGAGCTGAATGTTCTATTGGCTGTCC
GATACTCGACACATATTAATAAAGGTTGCTATGCGCGACGACATGCAGCG
AAACTCTTGATCATTTCATTTGGAAAACCCCAACAACAAACGTCACTATT
CCCCAAATTCTACTCACGTGTCCCATTGCCTTCATGTTTTTGTTGGTGAT
GAGGTGCCTCACGCACGCACGCCATGGCGCTTGCGGTAGAACCGCCCTGA
GGGCCGCCGGTGATCCTTTGTGACCGTCGATGAAGAACGTCACCTCGCCG
AACGAAAGAAGTCGATGCATGTGCTCGTTCCCGCAGGTCTG
back to top

protein sequence of EsuBft1022_6a-0001

>EsuBft1022_6 ID=EsuBft1022_6|Name=EsuBft1022_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=151bp
MPAAKMNLPLTTDGIEDPSWLPATKKERIVVLGMATPPARWWLNWQQNKR
EDRQRPVNPDDARLLMELSYDKLVYAIGTGTGTFGVPGVRENCYMLKEAS
DARLLRAAIVNVLEEACLAGMTDEGKEKLLFFVGKGYCGAPSQNFQNFRV
L
back to top

mRNA from alignment at Scaffold_103:264128..268530-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1022_6a-0001 ID=EsuBft1022_6a-0001|Name=EsuBft1022_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4403bp|location=Sequence derived from alignment at Scaffold_103:264128..268530- (Ectocarpus subulatus male Bft15b)
GCTGTTGCCGATCGGGCGATCGACACGGCCCAAGATATCTTGACGCACCC
CTCACGCGCCTTCATGCCGGCCGCCAAGATGAATCTGCCGCTCACCACTG
ACGGCATCGAGGATCCGTCGTGGCTGCCGGCCACCAAGAAGGAGCGGATC
GTCGTGCTGGGCATGGCCACGCCACCAGCAAGGTATGTTTATATCGCTGT
CTGGCCACTGCCAGACACAACAATCAAGTTCTCCGGGCTTGGTTTCATTC
ACGGCATTCAGGGTCGAACAAAGGAATGAATGCTGCAAGTTCCCGGATTG
GCATGCCATTTTCGGTCTAACCAAGAGAATGGGGGCCCTTTGGACGCTCG
TGTAAGGGTATGCTGTTATTGGTGAAGTCGAAGCCGCAACTGTAGTGCTT
TCTACAGCATGCTTTTTATAGCCATGTGGATCATGCGTTGTGGAGAGATA
ATCGTCTGTCCTGGGGTATCACGCTATCAGCGACGGGGATGGAAGCGGTT
GAAAGTGTCACGATTTCGTGGTTACTACTGTATTTTGTTGTTACCTGCAA
TACATTGCTGCATTATTGTTGCTTGCCTTGAGCATTTGACCGTTGCCAAA
TCACATCACCTTTAACAAGGGGCTTGTAGGCGGTCACGGGCTTGCTGGTG
TAGCTTTTGCGAAACGATCGAGAGGCATTCTATTGCTTTGTGCTTTGTCG
TTCGGGCATTTTTTACACGCCACGGACGTGCAAGCGGGGAAGGGCGAGGA
GTGCACACACGTTTGCTGTTGTGTTTCTTCGAACGACTGACGACAAGAGT
CTGAAGATGAAAGGCCAAGGAACGCAGGCTGGGTTCATTACTGAAGCCTA
ACTTTTGAGACACCTATCGCGGTTCCCTGCTACCTCTTTCGTAATTTACT
TGTGAGGCCAAGGTAATCGACAGTGACGTGTACGAGGTGATCTACGTCTC
GCCCCGTAACTACTTCGTGTTCACCCCGATGCTGGCCGCCTCGGCCGTCG
GCACCGTCGATGTAAGGTCCATGATGGAACCGATCAGGATGGCCAACCCC
TGCGTTTCATACGTGAGCGGGGAGGCCATCGACATCTTCCCCCGAGACAA
GATAGTCAGAGTTAGCGATTTAGGATACCGGCCTTGTGTGTTTTGTGAGA
TGTGTGCGACGTTTGATGCGAGATAAGTATGGATGTGCATCCTCGTGCTT
TACCGTGTTCGTCGTCGTGCATGTTTCGCTTCCCTTCGGGCACCCTCTGT
TGTGTCCTTAACATTGAAGCAGTTCCGAGTTCTATCCAGGTGTGCGTGCG
TGTGTGTGTGCATCATATTGTTTCCAGGCAACGACTTCAACTCTCGCTTC
TCTAGTCCCGTTGCCACGTTTTGGTTGCTTGTGTCTGCCCTTGCATGTAC
ATGCGCGAATGTGTATGGCAGGTGGTGTAAGCCCTCCCTTGTCCACGAGA
GCAACACCCACCTCAAGCCATAGAAAGTGCCGGCGCTTTGCCCCCCCCGC
TGTACACGAAGGGCAACCGGAAAGAAGCCGCAACGGCAGGGTTGAATTGG
CAGCAAAACAAGCGGGAAGATCGGCAGCGACCGGTGAACCCCGACGATGC
GAGGCTTCTGATGGAGCTCTCCTACGACAAACTGGTGTACGCCATCGGAA
CAGGAACGGGGACCTTCGGGGTCCCGGGGGTGCGAGAGAACTGCTACATG
CTCAAGGTGTGTACCGAGAGTATTCTGCCTTGCATCTCATGTTGGCCGCT
GGTAAGGACAAACGCCAGTACCGCAACCGCTCTGGTTCGCTTGTCTCGCT
TATCTTCGCTTTCTTCAGGCTCCGGCGCGCAGGGCGGGGAGCGATCATCG
TGTTCATGAGCGCCTGCGGGCCCCCCCCGGTCCTACGTGCTTGCTACGGG
GCTCGCTTCACAGAAGTAGCTCGAACAAAACCGATCTCAACCCTCCATGC
CCTTTCCTTGATGATCATGTTTGGATTGGTTCGAAAACAGGAGGCAAGCG
ACGCGCGACTGCTACGCGCCGCGATCGTTAACGTCCTTGAGGAGGCGTGC
TTGGCCGGGATGACGGACGAGGGGAAGGAAAAACTGTTGTTCTTCGTGGT
AAGAGAGGACCACTGGGCTGATGGTTGGTGGAGAGCAATGGTCCGGTTGG
TGGAGTACTGTGGAGGTTTGGTTTTCAGTCTCGAGGCAGCTGTCCCATGC
TCTGTCATACGACAACATGCAGAAAAGTAACTGGAGGGGAAACACCGCTG
CTATGAGATGGGCTATCGTTCAGCGACTGGGGGCAGCTGAATAGTTTGCC
GAAGCCACTTGTGGTAGATAGGTTCGAAGATTGCGATGATGACTTCTCAG
GCCGTGTTTGTTTTTTTCGCTGGGATGTTTTCAAAGTGAACCAAACTGCC
GGAGAAGGCGGAAGAAAAGCCGTCTGATACCGCCAACGTTTGCCCAGCTC
ATTCAGTTTTGGCTGTCGCTTCTCGCTCTGTAGTTATGTGCTGATCCGCG
ATCTCACAGCAGTATCACCAACTGACGCCAACGTCTGGATGCTGAGAAAC
TAAGGCATTGCTTCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGACGG
TATAAACAAGCCAATTCACGTCGTGAGCTCGGAATCCAGGTTACCGTTCT
GTTTTTTTCCTCTGCTTTTATATTGGAGGCCATTTGTTACGATGTCTTTT
TTTAGGCTGCCCTTTTTTCCCAAAAGAGACGTCCCTTTGCGCGATGCAAA
GAAGCTGCAGTTCATGAGACTGCACCATCCCTCACACCCTAACACGTGAT
CCGCTCAAACTACGCGTGAAGCGTCGTCGCAAGTAGCACACGACGTGTCC
CCCAATATACGGTACATGCGGTTTGCGAGAAATGGGCTGAAATTCCAACG
ACGAGGCAATATTGTAGCAAGGAAGAACTTTCCGGCTCTCTGGGGGGTGA
TGGTCAAGTTTTCGAGTTGGGCCAGTGCCTCATCGTGTGCACCTGGACTC
CACTAGCAGGGAAATGTTCCACGAGTAGGTTCTGTAGGGTAAGGGTACGT
TCGGTAGGGTACTGGGTCTGTCACAGAACTCACAGAAAAGTTCGGTTGGG
TGCTGGTTCTGTCACAGAACTCACAGAACTATAGGGTATTGTGGTGCGCC
GTCACAGAACTTTCAGAACTTTCGAGTTCTGTAAGCGAGCTGTCACAGAA
AGTTCGGTAGGGTACTGGGTCTGTCACAGAACTCACAAAACTATAGGGTA
TTGCGGCGCGACCTTCACAGAACTTGTTGTTGTTGTTGTTGTTGTTGTCG
GTGAAACTGGGTATCTTCCGGAGGGTACTAAATAGGGTAGGTTCTGTAGG
GTAAGGGTACGGTAGGGTCTGTCACAGAACTCACAGAGAAGTTCGGTAGG
GTACTGGATCTGTCACAGAACTCACAGAACTATAGGGTATTGTGGTGAGC
CGTCACAGATCTCACAGAACTTTCGAGTTCTGTAAGCGAGCTGAATGTTC
TATTGGCTGTCCGATACTCGACACATATTAATAAAGGTTGCTATGCGCGA
CGACATGCAGCGAAACTCTTGATCATTTCATTTGGAAAACCCCAACAACA
AACGTCACTATTCCCCAAATTCTACTCACGTGTCCCATTGCCTTCATGTT
TTTGTTGGTGATGAGGTGCCTCACGCACGCACGCCATGGCGCTTGCGGTA
GAACCGCCCTGAGGGCCGCCGGTGATCCTTTGTGACCGTCGATGAAGAAC
GTCACCTCGCCGAACGAAAGAAGTCGATGCATGTGCTCGTTCCCGCAGGT
CTG
back to top

Coding sequence (CDS) from alignment at Scaffold_103:264128..268530-

>EsuBft1022_6a-0001 ID=EsuBft1022_6a-0001|Name=EsuBft1022_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=456bp|location=Sequence derived from alignment at Scaffold_103:264128..268530- (Ectocarpus subulatus male Bft15b)
ATGCCGGCCGCCAAGATGAATCTGCCGCTCACCACTGACGGCATCGAGGA
TCCGTCGTGGCTGCCGGCCACCAAGAAGGAGCGGATCGTCGTGCTGGGCA
TGGCCACGCCACCAGCAAGGTGGTGGTTGAATTGGCAGCAAAACAAGCGG
GAAGATCGGCAGCGACCGGTGAACCCCGACGATGCGAGGCTTCTGATGGA
GCTCTCCTACGACAAACTGGTGTACGCCATCGGAACAGGAACGGGGACCT
TCGGGGTCCCGGGGGTGCGAGAGAACTGCTACATGCTCAAGGAGGCAAGC
GACGCGCGACTGCTACGCGCCGCGATCGTTAACGTCCTTGAGGAGGCGTG
CTTGGCCGGGATGACGGACGAGGGGAAGGAAAAACTGTTGTTCTTCGTGG
GTAAGGGGTATTGTGGTGCGCCGTCACAGAACTTTCAGAACTTTCGAGTT
CTGTAA
back to top