Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FI08 |
| ProteomeId | EsuBft1016_2 |
| Protein domains | IPR009057 |
| Protein domains | IPR007087 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 183 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.22e-238 |
| EggNOG OGs | 2DCSR@1|root,2S5KN@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003677 |
| GO | 0046872 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1016_2a-0001 ID=EsuBft1016_2a-0001|Name=EsuBft1016_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1836bp|location=Sequence derived from alignment at Scaffold_389:651797..654600+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGCGGCTGCCAGATAAGAATACTCGCAGGGGGAGGGAGGGAAGAGG
GGGGAGTGATCCCAGAGTAGAGAGTATTGGATTTGGGAGGGAGGGGGAGG
GTGGGCATTGTACGCACGCGTCGTGCCCCTGGGTGCCCCCGAGAAAAGCG
TGCGTGCCACGCAACGTGCAGCGTGCCACGAGCTGCCTGCGGTGCAGGGG
GATTGTGTCCCAGTGCAATCCCTTATCCCATGGGATATGGAAAGAGCTTG
GCAAGCTTGCAGAGTTGAAACAAAGGGGTCTGATTCTTGACCGTCACTTC
GAGACAATCAAAGCACACGTGAAGGCGGGCAACTCCGTTGCGAAGGAGCG
ATGGGACGCCATCGAGAGCGCGTGGGGGCTGAAGCAGAACGGTGTCTTCG
ACGAAGAAGAGTGGGTCACGCAGATTGACGGCGAAACCGCGCGAGGTGCT
GCACCGCCGTCTCAGCACCCACCAGCTGCTGCAGGTACCGCGAGGAGAAA
GGCCGTGGATCGCGGGAAGCAAGCTAGGGAGAGAGCTGCCAAAGGCACTT
TAGGAGGCAACATCTGCAACGCGTTCGTGATTGGCAGCCGAGGACCGATT
GAGCGGACTCGCGGTGGAGTGAAAGAGCTCATATCCGGAATAAGCTTCCC
ACCTCCGACACCGGAGTCCCACCCTTCTTGCCCTCACTGTCCCATGACCT
TCGTGAACGAGCAAGGCCTTGGGATCCACGTGGGAACGCAGCACAGCAGT
GCAAACATGCCCAACGGCGTGCGGCTGCGGCGCATGTTACGGAAGGATGT
CGGAGGGAGTGTCCTGCCGTCGGAAGCAGCCGGGCCTGGGCGTTGTTGGC
AGGTGAACGGAAGCGCTTTCTCGATCTCGATCGACTTGGATAGCGACGGC
TATATGGACCGCAAACCCAAGGACACTCGTGGGGCTGCCAAGCGCAGGCG
ATACAAGTTCAGGTTCACAGCCCACCCGGTCAACCAGCTGCGCATCCTCC
AGGACAACGCCGAAGACCTCTGGATGAAGGAGGAGCAGCGCACTCCTCTT
CAGTTCTTGGAGGATCGTCTCAAGGTTCCCTTCAGCAATATAGTGAAGTG
GGCCAAGAAGGAGAAGGAATTGGTCGCGGCGGCAGCCGATGACGCAGAGA
AGCGACTGTACAAGGGGTTCGTGGAGCGGCGGAAGAGAAAGCTGAAGGTG
TCGACCCTGTGGCTGACGATCACGTTCCGGAAGCTCGTGCGAGAGATGTA
CCCCGGGGATCAACGAGCGGCGTCCTTTTGCGCATCCTTCAGGTGGGCGC
GAAGATGGGCCAAGAGGCACAACCTGTACAAAAGACGCCGGACCAACCTC
AAGAACAAGTCTGTCGAAGAGCGGCTTCCAGAGATCCAGCGCTTCCACCG
GCTGTTTCGCAAGCTCCTGCAAAAGCCGGTGCAGCTGCTCGGCACGTGGG
ACAAGAGAGGTGCGTTGCGGGTAGCAATCTCGCAGCCCTTTCCTGGCCTT
GAGAAAAGGCAGTGCACCATGCAAGACATCTTTGGTCCGGGTGAGAAGAC
CATGCAAATTTCGGTGATTTTCCGAGGCACGGGAAAGCGGATCTCGCCGG
TGGAGAAGGCAGCGTATCACGAGGACGTGGACGTGTTTTTCCAGGTGAAC
GCGTGGGCCAACCAAAAGTTCTGTATGGAGTGGGCGAAGAGGTCCTACCG
CGAAGGCCTGATGCGCGGGCGGGGTGTGATCGATAATTCGGGTGGCTCGA
TTCTTTGTGGTTGGAGCTCAAAGCGGGTGGGTCATGGCGGAGCGTGGATG
GGTAGAAACGTGTTGAAAACGTGTTGCAAAGTATAG back to topprotein sequence of EsuBft1016_2a-0001 >EsuBft1016_2 ID=EsuBft1016_2|Name=EsuBft1016_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=611bp
MQRLPDKNTRRGREGRGGSDPRVESIGFGREGEGGHCTHASCPWVPPRKA
CVPRNVQRATSCLRCRGIVSQCNPLSHGIWKELGKLAELKQRGLILDRHF
ETIKAHVKAGNSVAKERWDAIESAWGLKQNGVFDEEEWVTQIDGETARGA
APPSQHPPAAAGTARRKAVDRGKQARERAAKGTLGGNICNAFVIGSRGPI
ERTRGGVKELISGISFPPPTPESHPSCPHCPMTFVNEQGLGIHVGTQHSS
ANMPNGVRLRRMLRKDVGGSVLPSEAAGPGRCWQVNGSAFSISIDLDSDG
YMDRKPKDTRGAAKRRRYKFRFTAHPVNQLRILQDNAEDLWMKEEQRTPL
QFLEDRLKVPFSNIVKWAKKEKELVAAAADDAEKRLYKGFVERRKRKLKV
STLWLTITFRKLVREMYPGDQRAASFCASFRWARRWAKRHNLYKRRRTNL
KNKSVEERLPEIQRFHRLFRKLLQKPVQLLGTWDKRGALRVAISQPFPGL
EKRQCTMQDIFGPGEKTMQISVIFRGTGKRISPVEKAAYHEDVDVFFQVN
AWANQKFCMEWAKRSYREGLMRGRGVIDNSGGSILCGWSSKRVGHGGAWM
GRNVLKTCCKV back to topmRNA from alignment at Scaffold_389:651797..654600+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1016_2a-0001 ID=EsuBft1016_2a-0001|Name=EsuBft1016_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2804bp|location=Sequence derived from alignment at Scaffold_389:651797..654600+ (Ectocarpus subulatus male Bft15b)
ATGCAGCGGCTGCCAGATAAGAATACTCGCAGGGGGAGGGAGGGAAGAGG
GGGGAGTGATCCCAGAGTAGAGAGTATTGGATTTGGGAGGGGTACATACC
CCACATAGACTATAGACTATATCAGTATTTGTATTTTTTTAGAGGGGGAG
GGTGGGCATTGTACGCACGCGTCGTGCCCCTGGGTGCCCCCGAGAAAAGC
GTGCGTGCCACGCAACGTGCAGCGTGCCACGAGCTGCCTGCGGTGCAGGG
GGATTGTGTCCCAGTGCAATCCCTTATCCCATGGGATATGGAAAGAGCTT
GGCAAGCTTGCAGAGTTGAAACAAAGGGGTCTGATTCTTGACCGTCACTT
CGAGACAATCAAAGCACACGTGAAGGCGGGCAACTCCGTTGCGAAGGAGC
GATGGGACGCCATCGAGAGCGCGTGGGGGCTGAAGCAGAACGGTGTCTTC
GACGAAGAAGAGTGGGTCACGCAGATTGACGGCGAAACGTAGGGTATTAC
CAGCAGCACCCGCCTGTCCTCTTCATCCCAACAAGATGCCGGCAGCGCGC
GAGGTGCTGCACCGCCGTCTCAGCACCCACCAGCTGCTGCAGGTACCGCG
AGGAGAAAGGCCGTGGATCGCGGGAAGCAAGCTAGGGAGAGAGCTGCCAA
AGGCACTTTAGGAGGCAACATCTGCAACGCGTTCGTGATTGGCAGCCGAG
GACCGGTGAGCACACAGTTACTTTTCGCTACCGGTGTAGTCTACATACAC
GTTTTCGTTTTTCAAGAAAAACTCCCGTGAAAACGATGTCATGATGAGGG
CCATTTTTTTCAGTAGCGGCGCGTAAGAAAAATAAACAAAGGAGAAAGTT
CGTAGTTTTCGGGCTGGCCTCTGCTGGCAACGACTGCGTTTCGCACGCCG
TTTCTTGCTGCAGGTGCCCAAGCAAGTGGAGGAGTGTCGAGTTCTCGTCA
ACTGCGTCTTCTGGCAAGAGCCAACTCCGGTGCAAATACTCCGGAAAGTT
GTGCCTGTTTCAGATTCGTGGAATGCCGCTGCTGTGTAGACATGATAAGA
TAAGATTTTCGTCCATCCCCCTTTTTTTCAAGCAAGACCATAACATTAAA
AGAAAATAGTGGAGATAGATATTCTAGTTTGTATACCGGCGACTTTGTTT
TGGCGTCACAACAGTGCACGTTCTCTGCTTGATATTTAGTTTGAATAGTC
ACGAACGAAACAGACAGCTTTCGGCTCTCCACGGAGGTTTGAGGTCGAAA
GCGCCACACTCCATAGCGAACGATACATGACGTTACTCGTTGATTCACCC
CCCGGCAACTCCGCCCTGCTTCCACCATGCCATCAGATTGAGCGGACTCG
CGGTGGAGTGAAAGAGCTCATATCCGGAATAAGCTTCCCACCTCCGACAC
CGGAGTCCCACCCTTCTTGCCCTCACTGTCCCATGACCTTCGTGAACGAG
CAAGGCCTTGGGATCCACGTGGGAACGCAGCACAGCAGTGCAAACATGCC
CAACGGCGTGCGGCTGCGGCGCATGTTACGGAAGGATGTCGGAGGGAGTG
TCCTGCCGTCGGAAGCAGCCGGGCCTGGGCGTTGTTGGCAGGTGAAGTTC
GATCATGCGACGGGGACGGCTTAGTTTGTCCTCCAGCGGAAGCGCTTTCT
CGATCTCGATCGACTTGGATAGCGACGGCTATATGGACCGCAAACCCAAG
GACACTCGTGGGGCTGCCAAGCGCAGGCGATACAAGTTCAGGTTCACAGC
CCACCCGGTCAACCAGCTGCGCATCCTCCAGGACAACGCCGAAGACCTCT
GGATGAAGGAGGAGCAGCGCACTCCTCTTCAGTTCTTGGAGGATCGTCTC
AAGGTTCCCTTCAGCAATATAGTGAAGTGGGCCAAGAAGGAGAAGGAATT
GGTCGCGGCGGCAGCCGATGACGTAAAGTAGAGCCTCCTCGCCAAACAGC
AGCCTAAGCGGTGGTTTCCTGAGGCAGAGAAGCGACTGTACAAGGGGTTC
GTGGAGCGGCGGAAGAGAAAGCTGAAGGTGTCGACCCTGTGGCTGACGAT
CACGTTCCGGAAGCTCGTGCGAGAGATGTACCCCGGGGATCAACGAGCGG
CGTCCTTTTGCGCATCCTTCAGGTGGGCGCGAAGATGGGCCAAGAGGCAC
AACCTGTACAAAAGACGCCGGACCAACCTCAAGAACAAGTCTGTCGAAGA
GCGGCTTCCAGAGATCCAGCGCTTCCACCGGCTGTTTCGCAAGCTCCTGC
AAAAGCCGGTGCAGTAAAGGGCGCCCGACGAGTCGTACGTATCGGCGATT
ACGACGGTCGCGGAGAGAGAGTCCAGGGTTCCCAAATACGGTCAATTCTA
GCTCTGGGAGCGTTGGAATGTGGATCAAGTGTCTTTGGCATTCGTGAACA
GGCTGCTCGGCACGTGGGACAAGAGAGGTGCGTTGCGGGTAGCAATCTCG
CAGCCCTTTCCTGGCCTTGAGAAAAGGCAGTGCACCATGCAAGACATCTT
TGGTCCGGGTGAGAAGACCATGCAAATTTCGGTGATTTTCCGAGGCACGG
GAAAGCGGATCTCGCCGGTGGAGAAGGCAGCGTATCACGAGGACGTGGAC
GTGTTTTTCCAGGTGAACGCGTGGGCCAACCAAAAGTTCTGTATGGAGTG
GGCGAAGAGGTCCTACCGCGAAGGCCTGATGCGCGGGCGGGGTGTGATCG
ATAATTCGGGTGGCTCGATTCTTTGTGGTTGGAGCTCAAAGCGGGTGGGT
CATGGCGGAGCGTGGATGGGTAGAAACGTGTTGAAAACGTGTTGCAAAGT
ATAG back to topCoding sequence (CDS) from alignment at Scaffold_389:651797..654600+ >EsuBft1016_2a-0001 ID=EsuBft1016_2a-0001|Name=EsuBft1016_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1836bp|location=Sequence derived from alignment at Scaffold_389:651797..654600+ (Ectocarpus subulatus male Bft15b)
ATGCAGCGGCTGCCAGATAAGAATACTCGCAGGGGGAGGGAGGGAAGAGG
GGGGAGTGATCCCAGAGTAGAGAGTATTGGATTTGGGAGGGAGGGGGAGG
GTGGGCATTGTACGCACGCGTCGTGCCCCTGGGTGCCCCCGAGAAAAGCG
TGCGTGCCACGCAACGTGCAGCGTGCCACGAGCTGCCTGCGGTGCAGGGG
GATTGTGTCCCAGTGCAATCCCTTATCCCATGGGATATGGAAAGAGCTTG
GCAAGCTTGCAGAGTTGAAACAAAGGGGTCTGATTCTTGACCGTCACTTC
GAGACAATCAAAGCACACGTGAAGGCGGGCAACTCCGTTGCGAAGGAGCG
ATGGGACGCCATCGAGAGCGCGTGGGGGCTGAAGCAGAACGGTGTCTTCG
ACGAAGAAGAGTGGGTCACGCAGATTGACGGCGAAACCGCGCGAGGTGCT
GCACCGCCGTCTCAGCACCCACCAGCTGCTGCAGGTACCGCGAGGAGAAA
GGCCGTGGATCGCGGGAAGCAAGCTAGGGAGAGAGCTGCCAAAGGCACTT
TAGGAGGCAACATCTGCAACGCGTTCGTGATTGGCAGCCGAGGACCGATT
GAGCGGACTCGCGGTGGAGTGAAAGAGCTCATATCCGGAATAAGCTTCCC
ACCTCCGACACCGGAGTCCCACCCTTCTTGCCCTCACTGTCCCATGACCT
TCGTGAACGAGCAAGGCCTTGGGATCCACGTGGGAACGCAGCACAGCAGT
GCAAACATGCCCAACGGCGTGCGGCTGCGGCGCATGTTACGGAAGGATGT
CGGAGGGAGTGTCCTGCCGTCGGAAGCAGCCGGGCCTGGGCGTTGTTGGC
AGGTGAACGGAAGCGCTTTCTCGATCTCGATCGACTTGGATAGCGACGGC
TATATGGACCGCAAACCCAAGGACACTCGTGGGGCTGCCAAGCGCAGGCG
ATACAAGTTCAGGTTCACAGCCCACCCGGTCAACCAGCTGCGCATCCTCC
AGGACAACGCCGAAGACCTCTGGATGAAGGAGGAGCAGCGCACTCCTCTT
CAGTTCTTGGAGGATCGTCTCAAGGTTCCCTTCAGCAATATAGTGAAGTG
GGCCAAGAAGGAGAAGGAATTGGTCGCGGCGGCAGCCGATGACGCAGAGA
AGCGACTGTACAAGGGGTTCGTGGAGCGGCGGAAGAGAAAGCTGAAGGTG
TCGACCCTGTGGCTGACGATCACGTTCCGGAAGCTCGTGCGAGAGATGTA
CCCCGGGGATCAACGAGCGGCGTCCTTTTGCGCATCCTTCAGGTGGGCGC
GAAGATGGGCCAAGAGGCACAACCTGTACAAAAGACGCCGGACCAACCTC
AAGAACAAGTCTGTCGAAGAGCGGCTTCCAGAGATCCAGCGCTTCCACCG
GCTGTTTCGCAAGCTCCTGCAAAAGCCGGTGCAGCTGCTCGGCACGTGGG
ACAAGAGAGGTGCGTTGCGGGTAGCAATCTCGCAGCCCTTTCCTGGCCTT
GAGAAAAGGCAGTGCACCATGCAAGACATCTTTGGTCCGGGTGAGAAGAC
CATGCAAATTTCGGTGATTTTCCGAGGCACGGGAAAGCGGATCTCGCCGG
TGGAGAAGGCAGCGTATCACGAGGACGTGGACGTGTTTTTCCAGGTGAAC
GCGTGGGCCAACCAAAAGTTCTGTATGGAGTGGGCGAAGAGGTCCTACCG
CGAAGGCCTGATGCGCGGGCGGGGTGTGATCGATAATTCGGGTGGCTCGA
TTCTTTGTGGTTGGAGCTCAAAGCGGGTGGGTCATGGCGGAGCGTGGATG
GGTAGAAACGTGTTGAAAACGTGTTGCAAAGTATAG back to top
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