Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1002_10 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 132 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1002_10a-0001 ID=EsuBft1002_10a-0001|Name=EsuBft1002_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1329bp|location=Sequence derived from alignment at Scaffold_228:905..4511+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATGTTTCTGGAAGATGCTTCGTTTCAGTTCTTCCACAAAGCGGGTGG
GCCGATGACGTCCAGACTTTCGGAATAGCGTTGCATGTTCTCGACTCCGC
CACGTGTATTATTCAGCAGGCGGTGTTGATGTACTCAAGAAAAGGGAGAG
CAGCAAAGGAGAGAGACGGAGAGAGAGGCGGGAAGGGAAGGCAGGTAGAG
CAGAGGCATCAAAGGATGGTGCAACAGGGTAGCGGAACGTTCACTCGGCG
CACTGGTATGAATCTTTTGGAAATGGCGTTGGCAACGGTGCTGAAGTGGC
TATCCTGTAATCTTGGACACTTCTGGAATCAAACAACGCGGAAAACGCCA
AGGATCGCCGGAACGTTCGTGGATACCGCTGTTGTTGCCAGCCGAGACTT
TAAGGGCTCAAGAAACAATCGAGATCGGGAAACTGTTTCAAAGAATCTGG
GGCCATCAAGCGTTCGGACACGAGCAGTTAGCTCCTGGAGGTACCGTAAC
AACCTTCATATTTTGTTCGGAGAGAGCATTTCGCAGGTGATGTATTGTCT
TCGTCTCATCTGTTCTGGCTCCAGTCTACACACCTTTCGGTGCACATAAT
TCCGACGTGTCAGTTGGGGTCACACAAGAGGAAGGATACACGGGAGTTCC
TCCATTTTTTGTTTTAGTGCCTCAACTTTCTCCCCGCGGTGCTTGTCATA
GTTTGGTCGCGACAAGGGGTCAACTATCCCTTTCCCTCGTCTCGACCATG
AAGCCGAAGTGTATGATATGATGTGACTGCGCAGGTAGGATCCCGTGCCC
CCTCTTGTTTCGCCTATGTAGTACGGAACAACGGCAGTGGAGCAGATTCC
CACTGCACGGTAGTAGTTGCGCCAGGGCAGTGCTGGTGTTGTTGGGTCTT
GCTCTGTGCAGTCCATGATAAACACGAACGTCACTCTGCGCAATGATGTG
GCCGTGTGTGCACAACGCCTAGCGTTCCCCGGCTGATAACACGCGAGCGC
CGAAGCTTACACCTAGCACCTAGGTACACCTAGCACCTAGGTACACGGCG
GTTGGACTTGTGTTTTCTATTTTCCTGGGGACCGTTATGCCGAATGTGGT
CGCAGATTCATGCAGGAGCCGCGGACGCAGCATGGCACAGCAGTAGTAAC
ATCAGGCACTTTTTTCCGTTGACCCTCGGGTTTTTTGGCGGCACTTGCTT
CGATTGCCTGTGTACCACACCTCGCCGTAGATGGTTGTTCTATAGAGCTC
CCCATATATTCCCGATGGACGCAAGGGTATGCCTGCCGTCTGTTTTGAGC
GTGGTCCGATACGCTTAGTTGCGAGAGAC back to topprotein sequence of EsuBft1002_10a-0001 >EsuBft1002_10 ID=EsuBft1002_10|Name=EsuBft1002_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=25bp
MMFLEDASFQFFHKAGGPMTSRLSE back to topmRNA from alignment at Scaffold_228:905..4511+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1002_10a-0001 ID=EsuBft1002_10a-0001|Name=EsuBft1002_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3607bp|location=Sequence derived from alignment at Scaffold_228:905..4511+ (Ectocarpus subulatus male Bft15b)
ATGGTACATGGTTGTATTGCAAGGTCGAACACCGCTGGCACGACGGTTGG
CAGGCCCTACCGTGCACAAAAGTTGAATGGGAAAGTTTCTGAAGGGTTCG
GGAATGTTCTAGATGTTTCTGGAAGATGCTTCGTTTCAGTTCTTCCACAA
AGCGGGTGGGCCGATGACGTCCAGACTTTCGGAATAGCGTTGCATGTTCT
CGACTCCGCCACGTGTATTATTCAGCAGGCGGTGTTGATGTACTCAAGAA
AAGGGAGAGCAGCAAAGGAGAGAGACGGAGAGAGAGGCGGGAAGGGAAGG
CAGGTAGAGCAGAGGCATCAAAGGATGGTGCAACAGGGTAGCGGAACGTT
CACTCGGCGCACTGGTGAGTGATGAGAAGCGGACAGTCAGTATATCGTCA
CCGGTTGCAACGCATCCCGCCGGACTGCTGCTGTGCTGCATTCAGATCGC
AAGAGCAGAGGTTTGGCTTCGGTTCCGTTTGCGCAAGAAAGTAGCAGTAG
CAGTAGCAGGTAAAAAATAGCAGCAGCCGTGTACCCGCTAAATGTTGCCA
CGTACGTAGTGTAGAGTGCATACGTTCGGGTGCACGGGCGACTCTACAGG
AGAGGAATCATATTGCAATAGACTATGCGAAGGATGTACACAAACGCAAA
GCTGGCAACCGCCAGGTTGATTGTGATGCTGCTCTGTGATTACTGCGGCA
CAGGGTGGCGTTGGGAGTTGGGTTCAGTTCCCTTTTTTCTCAATGTTCTC
TAGACTATTAGGAAACATGGACCGCTATAGTTTTGCATTTGTATTTGTAT
GTTTTCGTGTTTTTCCCACGCATGCTGTTCAGAACCTTTTTTTAAAGTTC
TCGATCTTGGAAAGCAAGCCGGACATACATGTGCAGCGTAGAATATAGCT
GCTGTGGACGCTGCGAGCGGGGCACCGCCCAGAATAGCGGCATTGCGGGG
CATAATAATTGGGAGGATCCCCTGCTTGGGGGCGTGAGGCTTCGTGCTAC
CCACCATGAGTGCCTCTAAGGCCGTCAGTGAGCTGCTGCAACCGTCTGGT
TCTATTCGGTACCTGGTGCAACGTTCCCACCATCTGAGCTCTTCCTGCGC
TGCCGTGCATCACCGCGTGTGTCTGGGTGCGCCAAAAAAGTGTGTCGGTG
GTTTCAGCATCCACATACAGCAGTAAGCAGAATATATGAAGCGGTACCAT
GGTACTAGGGTAAAGGCGCCGAGGATAAATTTCAGAGCGGCACCCGTCGG
GATTATCGCGATCTACGGTAGGTGTATACGCATAACACCATTCACCACAG
AGTAGTCTAGACCATATCTTGTTCCCTTCCTTTTCCGCCCCTGAGGCTGA
TTACACCCCAGTCATGCAAGAACGAAATGACTCCCGAGGTCGTTCCCTGG
AGCAATCGCTCAGCCTCGTCGTTTTTTCAAACTCCGCAAACGTTGAGACC
ACGCGGCGTGTAGCTCTCATCTAGCATGAGACTAGACTATGTTGTCCATA
TGCGTACTACATCCAGCAGCTGAACCGCGGCATATCGCAGAAGTTCTTAT
CTTGCAACACCCCGATTCCCCGCTCGGCTCGTTGTTCGATTGAGTTTCAC
GTTGCCCGTGGGGTAAGGTTGCAAGGAAACAAACACCCGTAGCCCTGCTT
GCGTGGCTTGGACAATGGTTTGCACAGGGAATAGGGAGGGATGTATGCAT
GCATGCATGCATGCGGTTTTGGGTTGTGTGGCGAAACTGTCTACTTTTTT
GTGTCCCGCGTCGCCGGCTGTTTTATTGTGTGACCAACTTCGGCGTCGCG
TCTAACGGACAAAATCGCGAAATGTTCGTTGCCTTTAGATCACGTGTTTT
TTTGTTTCGCTGCTTTTCACCACTGGCCGAGCGAGATATGTTTCACCACC
GGGAACACGTTCAGGAAAAACGTCGGAAAAATCAACTTTTTTTTTTTGTG
GAATGTATCAGAGAGCGATAGCGATATAGGCGCGGACCGTTTCATGCGGG
CGCCACACGGCACTTCATTGTTTCCAGGCCATGTTTCTGCCCTGCCTGAT
GCTTCTGGAGCCTAGTAAGTTTGTGTCATGCTCGTGCGCAGTTGTTCGAA
ATGAATGGGCAGCGGTAATGGCGGGCATGCAGCACTGTTTTTGCCGGATG
TGGCGAACGGCTGTTGTTGTATTTCGTTCGTTCATGTTCCACCCGCTTTT
TCCCGTGCTATCGAGAACTGTTTTTTGGATGGAAGTTTTGGGCAAAGGCA
TGGCGGTCGATACTTGATCATTTCGGACATGGCTTCGCGTACCCTACGTG
CGGACAGGGCTTTCTGTACCCTACGTGCTAGATTGCCGCTCGACTTTGCG
GTCTTTTCACAGCATGGAGTAGACAATACTGTCGCTGCTGCCGCTTCCCG
CTTGACAGTTGTATCTCCATGTCAACATCTGCCCGCAACACACTGCTGTC
GAACGAAGCAACCTGGCTTCGAGTACAACTTCCTTGTGAAGTTATGGACC
GGTTGTTGTGCCGTGAAACCTCGTTATTTCCAGGTATGAATCTTTTGGAA
ATGGCGTTGGCAACGGTGCTGAAGTGGCTATCCTGTAATCTTGGACACTT
CTGGAATCAAACAACGCGGAAAACGCCAAGGATCGCCGGAACGTTCGTGG
ATACCGCTGTTGTTGCCAGCCGAGACTTTAAGGGCTCAAGAAACAATCGA
GATCGGGAAACTGTTTCAAAGAATCTGGGGCCATCAAGCGTTCGGACACG
AGCAGTTAGCTCCTGGAGGTACCGTAACAACCTTCATATTTTGTTCGGAG
AGAGCATTTCGCAGGTGATGTATTGTCTTCGTCTCATCTGTTCTGGCTCC
AGTCTACACACCTTTCGGTGCACATAATTCCGACGTGTCAGTTGGGGTCA
CACAAGAGGAAGGATACACGGGAGTTCCTCCATTTTTTGTTTTAGTGCCT
CAACTTTCTCCCCGCGGTGCTTGTCATAGTTTGGTCGCGACAAGGGGTCA
ACTATCCCTTTCCCTCGTCTCGACCATGAAGCCGAAGTGTATGATATGAT
GTGACTGCGCAGGTAGGATCCCGTGCCCCCTCTTGTTTCGCCTATGTAGT
ACGGAACAACGGCAGTGGAGCAGATTCCCACTGCACGGTAGTAGTTGCGC
CAGGGCAGTGCTGGTGTTGTTGGGTCTTGCTCTGTGCAGTCCATGATAAA
CACGAACGTCACTCTGCGCAATGATGTGGCCGTGTGTGCACAACGCCTAG
CGTTCCCCGGCTGATAACACGCGAGCGCCGAAGCTTACACCTAGCACCTA
GGTACACCTAGCACCTAGGTACACGGCGGTTGGACTTGTGTTTTCTATTT
TCCTGGGGACCGTTATGCCGAATGTGGTCGCAGATTCATGCAGGAGCCGC
GGACGCAGCATGGCACAGCAGTAGTAACATCAGGCACTTTTTTCCGTTGA
CCCTCGGGTTTTTTGGCGGCACTTGCTTCGATTGCCTGTGTACCACACCT
CGCCGTAGATGGTTGTTCTATAGAGCTCCCCATATATTCCCGATGGACGC
AAGGGTATGCCTGCCGTCTGTTTTGAGCGTGGTCCGATACGCTTAGTTGC
GAGAGAC back to topCoding sequence (CDS) from alignment at Scaffold_228:905..4511+ >EsuBft1002_10a-0001 ID=EsuBft1002_10a-0001|Name=EsuBft1002_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=78bp|location=Sequence derived from alignment at Scaffold_228:905..4511+ (Ectocarpus subulatus male Bft15b)
ATGATGTTTCTGGAAGATGCTTCGTTTCAGTTCTTCCACAAAGCGGGTGG
GCCGATGACGTCCAGACTTTCGGAATAG back to top
|