prot_Ecto-sp9_F_contig10400.394.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10400.394.1
Unique Nameprot_Ecto-sp9_F_contig10400.394.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length165
Homology
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Thioredoxin (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE9_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 4.620e-112
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query:    1 MPTIKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            MPTIKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF
Sbjct:    1 MPTIKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Endoplasmic (reticulum-golgi intermediate compartment-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ98_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.150e-76
Identity = 112/162 (69.14%), Postives = 141/162 (87.04%), Query Frame = 0
Query:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            I+TFDFYRKIP+DLTETT+QGA+MS  A+  M +LF+CEL+AFL PE+Y+TV +D+N+DSKLRINFN+TMLALPC+YA++DVLD+LGTN+VN+T+NI+KWHTDE G K EFHGRN+ QE V+HD HHRDLDLAHEDGEHA+P+  + F +FI GN  V+ DF
Sbjct:    5 IRTFDFYRKIPMDLTETTVQGAIMSAVAMLFMFVLFICELQAFLRPEIYSTVMLDTNRDSKLRINFNVTMLALPCEYATIDVLDVLGTNRVNITKNIIKWHTDERGRKVEFHGRNREQEDVQHDTHHRDLDLAHEDGEHALPIEEAAFPEFIAGNAYVIADF 166          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUZ1_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.210e-48
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 0
Query:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPL-TSSNFKDFIQGNDNVMVDF 165
            +K  DFYRKIP D  + T  GA +S CA   MLILF  EL AFL     T+V +D+N D++LRINFNITM+ L CD+ SVDV D+LGTN  NMT+NI KW  DENGVKR F GRNK  + + HD+HH D++  H++G HA+ +    +F+DF++ +    V+F
Sbjct:    7 LKVLDFYRKIPEDFQKQTAVGASLSICAGLFMLILFFVELWAFLATTTDTSVILDTNSDTQLRINFNITMMDLACDFVSVDVYDVLGTNTQNMTKNIEKWQLDENGVKRIFQGRNKEVKEISHDEHHPDIETLHKNGVHAIAIGEDGSFEDFLESHKFSFVNF 169          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS36_9STRA)

HSP 1 Score: 168 bits (425), Expect = 5.080e-47
Identity = 81/162 (50.00%), Postives = 114/162 (70.37%), Query Frame = 0
Query:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            +KT DF+RKIP DLTE T  GA +S CA   ML+LFL EL AF++  + T V +D+N ++ LRINFNITM+ L CD+A+VDV+D+LGTN +N+T+N+ KW  DENG +  F GRN+ Q  + HD HH +L+  H++G HA+ +  ++F  F+  N  V V+F
Sbjct:    5 MKTVDFFRKIPTDLTEATALGAALSVCAGLFMLVLFLVELWAFMSTTIETGVMLDTNAETLLRINFNITMMELQCDFAAVDVVDILGTNSMNVTKNVEKWQLDENGKRMIFQGRNREQRDIAHDSHHPELEELHKNGIHAIQIAEADFDQFLSENPYVFVNF 166          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Thioredoxin (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFU5_FISSO)

HSP 1 Score: 167 bits (422), Expect = 1.680e-46
Identity = 81/162 (50.00%), Postives = 108/162 (66.67%), Query Frame = 0
Query:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAH-EDGEHAVPLTSSNFKDFIQGNDNVMVD 164
            + + DFYR++P DLTE T+ GA MS CA+  M +LF  E  AF T E  TT+A+D N   ++R+NFNITML L CDY SVDV D LGTN+ N+T+N+ KW  DE G +R F GRN+    +KHD+H + L+  H E+G HA+ LT  NFK F++ N    +D
Sbjct:   14 LSSVDFYRRVPKDLTEATILGAFMSACAMIVMAVLFFSETLAFATTETVTTIAVDENTSPQIRLNFNITMLDLHCDYVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFID 175          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV72_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.950e-45
Identity = 84/163 (51.53%), Postives = 111/163 (68.10%), Query Frame = 0
Query:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPL-TSSNFKDFIQGNDNVMVDF 165
            +K  DFYRKIP D  + T  GA +S CA   MLILF  EL AFL     T+V +D+N D++LRINFNITM+ L CD+ SVDV D+LGTN  NMT+NI KW  DENGVKR F GRNK  + + HD+HH D++  H++G HA+ +    +F+DF++ +    V+F
Sbjct:    7 LKVLDFYRKIPEDFQKQTAVGASLSICAGLFMLILFFVELWAFLATTTDTSVILDTNSDTQLRINFNITMMDLACDFVSVDVYDVLGTNTQNMTKNIEKWQLDENGVKRIFQGRNKEVKEISHDEHHPDIETLHKNGVHAIAIGEDGSFEDFLESHKFSFVNF 169          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQU9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.780e-44
Identity = 78/162 (48.15%), Postives = 108/162 (66.67%), Query Frame = 0
Query:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            +++ DFYR++P DLTE T  GA+MS   L  M ILF  E  AFLT  V T++++D N ++++R+NFN+TML L CDY SVDVLD LGTN+ N+T+N+ KW  D  GV+R F GRN+    V H++H   LD  H +G HAVPLT+     F++ +    +DF
Sbjct:   18 LQSVDFYRRVPKDLTEATSLGAMMSIICLSTMAILFFSETYAFLTTNVVTSISLDDNPEAQVRLNFNVTMLDLHCDYVSVDVLDALGTNRQNITKNVEKWQLDSEGVRRIFSGRNREMRAVSHEEHAESLDDLHANGVHAVPLTAETIDKFLEISKTAFIDF 179          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRX9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.950e-44
Identity = 79/166 (47.59%), Postives = 116/166 (69.88%), Query Frame = 0
Query:    1 MPTIKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRD-LDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            M  +K  DF+RKIP DLTETT+ GA +S  A   M +LF+ EL AFL+  V T V +D+N D+ LRINFN+TML L CDYA+VDV+D+LGTN +N+T+N+ KW  DE+G +  F GRN+ Q+ + +++HH + ++    +G HAVPLT   F++++Q +    ++F
Sbjct:    1 MSGLKMMDFFRKIPADLTETTITGAALSVAACIFMGVLFIVELYAFLSTTVETGVMLDTNSDTLLRINFNVTMLDLQCDYAAVDVVDVLGTNSMNVTKNVEKWQLDEHGKRMIFQGRNREQKAISYEEHHPETVEEMMANGIHAVPLTEGGFEEYVQSHPYAFINF 166          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Thioredoxin (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0F3_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.030e-42
Identity = 74/164 (45.12%), Postives = 114/164 (69.51%), Query Frame = 0
Query:    2 PTIKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            P+ +  D YR++P DLTET+  G ++S  A   M+ LF+ EL +F++    T V +D + D  ++INFN+TML LPC YA VDVLD+LGTN++N+++NI KW+ DE G +R F GRN+ +  + HD+HH  L++  ++GEHAVPLT+ +F ++++ N+   V F
Sbjct:    6 PSARGMDLYRRVPADLTETSTLGGLLSIVAGVFMVALFIVELISFMSHRTETMVVLDQSHDQLIQINFNVTMLDLPCRYAVVDVLDVLGTNRMNVSKNIEKWNLDEAGRRRYFQGRNREERSILHDEHHGALEVLLQNGEHAVPLTADSFDEYLESNEFTFVSF 169          
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKA3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.330e-42
Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 0
Query:    5 KTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDF 165
            K  DFYRKIP D  + T  GA +S CA   ML+LF  EL AFL+    T+V +D+N D++LRINFNIT++ L CDYA VDV D+LGTN  N+++NI KW  DE GV+R F GRN+ Q+ + HD HH  ++  H +G HA+PL   +F +F++ +    V+F
Sbjct:    7 KVLDFYRKIPEDFVKQTSVGASLSLCAGIFMLVLFFIELFAFLSTSTETSVILDTNADTQLRINFNITLMDLHCDYAVVDVYDVLGTNTQNISKNIEKWQLDERGVRRIFSGRNREQKDIAHDTHHPSIEELHMNGVHAIPLDDESFDEFLKEHRFSFVNF 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10400.394.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Thioredoxin4.620e-112100.00domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Endoplasmic1.150e-7669.14reticulum-golgi intermediate compartment-domain-co... [more]
Hypothetical4.210e-4851.53protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Hypothetical5.080e-4750.00protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Thioredoxin1.680e-4650.00domain-containing protein n=2 Tax=Fistulifera sola... [more]
Hypothetical1.950e-4551.53protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical4.780e-4448.15protein n=1 Tax=Leptocylindrus danicus TaxID=16351... [more]
Hypothetical4.950e-4447.59protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Thioredoxin1.030e-4245.12domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical2.330e-4249.07protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039542Endoplasmic reticulum vesicle transporter, N-terminalPFAMPF13850ERGIC_Ncoord: 4..93
e-value: 5.0E-27
score: 94.1
NoneNo IPR availablePANTHERPTHR10984:SF37PROTEIN DISULFIDE-ISOMERASE 5-3coord: 3..157
NoneNo IPR availablePANTHERPTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINcoord: 3..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10400contigEcto-sp9_F_contig10400:44..3070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10400.394.1mRNA_Ecto-sp9_F_contig10400.394.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10400 44..3070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10400.394.1 ID=prot_Ecto-sp9_F_contig10400.394.1|Name=mRNA_Ecto-sp9_F_contig10400.394.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=165bp
MPTIKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPE
VYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNI
VKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSN
FKDFIQGNDNVMVDF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039542Erv_N