prot_Ecto-sp9_F_contig10317.325.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10317.325.1
Unique Nameprot_Ecto-sp9_F_contig10317.325.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length432
Homology
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: Origin (recognition complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU9_9PHAE)

HSP 1 Score: 509 bits (1312), Expect = 4.740e-175
Identity = 366/433 (84.53%), Postives = 375/433 (86.61%), Query Frame = 0
Query:    1 QVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGATAAASAVHGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPRQDLDTIVSILAGALTLPGGNDXXXXXXXXXXXXXXXGVSAAF--VRDFNAVTRQTLGGAKNGVTSSAANSSXXXXXXGSGAQRSASLALPDLKDLAASGRSVGWFLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHSLALRSLSVTQALVLVAIVRLERRGRKKDGCSFEAVFRE 431
            +VLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSL KAKGATAAA                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPV+F+LDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFP QDLDTIVSILAGALTLPGG++XXXXXXXXXXXXXXX         R+FNAVTRQTLGGAKNG         XXXXXX   AQRSAS ALPDLK+LAASGRSVGWFLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSH+LALRSLSVTQALVLVA+VRLERRGRKKDGCSFE VFRE
Sbjct:   61 RVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLEKAKGATAAAX--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVIFILDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPGQDLDTIVSILAGALTLPGGSNXXXXXXXXXXXXXXXXXXXXXXXAREFNAVTRQTLGGAKNGXXXXXXXXXXXXXXXXX-AQRSASSALPDLKELAASGRSVGWFLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHALALRSLSVTQALVLVAMVRLERRGRKKDGCSFETVFRE 460          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: Origin (recognition complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P2_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 1.010e-151
Identity = 309/433 (71.36%), Postives = 314/433 (72.52%), Query Frame = 0
Query:    1 QVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGATAAASAVHGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQL--GITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPRQDLDTIVSILAGALTLPGGNDXXXXXXXXXXXXXXXGVSAAFVRDFNAVTRQTLGGAKNGVTSSAANSSXXXXXXGSGAQRSASLALPDLKDLAASGRSVGWFLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHSLALRSLSVTQALVLVAIVRLERRGRKKDGCSFEAVFRE 431
            +VLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGAT                                                                       XXXXXXX         + AA E         V  +  G  G     S +  NLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPRQ LDTIVSILAGALTLPGGNDXXXXXXXXXXXXXXXGVSAAF RDFNAVTRQTLGGAKNGVTS      XXXXXX    QRSAS ALPDLKDLAASGRSVGW LRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHSLALRSLSVTQALVLVA+VRLERRGRKKDGCSFEAVFRE
Sbjct:   61 RVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGAT-----------------------------------------------------------------------XXXXXXXXXXXXXXXXSPAAGEGXXTXGSGGVSSVEGGSAGQPASSSPHR-NLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPRQALDTIVSILAGALTLPGGNDXXXXXXXXXXXXXXXGVSAAFARDFNAVTRQTLGGAKNGVTSXXXXXXXXXXXXXX--QRSASSALPDLKDLAASGRSVGWLLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHSLALRSLSVTQALVLVAMVRLERRGRKKDGCSFEAVFRE 419          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: origin (recognition complex subunit 4-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259855)

HSP 1 Score: 105 bits (262), Expect = 5.190e-21
Identity = 60/141 (42.55%), Postives = 87/141 (61.70%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQLG---ITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIG-FPRQDLDTIVSILAGALTLP 271
            V+LNG  Q +D +A++EI +QL    + G    GS +  NLA +++++KTG+    PV+F+LDEF+ FA  + QTLLY L D+CQ       V+GL+  L+V+++ EKRVKSRFS RQI  F     D  + +    L LP
Sbjct:  135 VHLNGLLQTDDRIALKEITRQLNLDNVVGDKVFGS-FAENLAFLLEALKTGSKESKPVLFILDEFDLFAHHRNQTLLYNLFDICQSAQTPIVVIGLTCRLDVVELLEKRVKSRFSHRQIHVFNTLTFDQFMQVAEKKLQLP 274          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: Uncharacterized (protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EX04_ELECQ)

HSP 1 Score: 101 bits (251), Expect = 1.360e-20
Identity = 56/120 (46.67%), Postives = 80/120 (66.67%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI 250
            V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++KTG   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AV+GL+  L+++++ EKRVKSRFS RQI
Sbjct:   17 VHLNGLLQTNDRIALKEITRQLQLENVVGDRVFGS-FAENLAFLLEALKTGDRASSCPVIFLLDEFDLFAHHKNQTLLYNLFDVAQSAQAPVAVIGLTCRLDIMELLEKRVKSRFSHRQI 135          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: origin (recognition complex subunit 4 n=1 Tax=Cercocebus atys TaxID=9531 RepID=UPI0005F47EE2)

HSP 1 Score: 100 bits (249), Expect = 1.640e-20
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQLG---ITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI------GFPRQDLDTIVSILAGALTLP 271
            V+LNG  Q ND +A++EI +QL    + G    GS +  NL+ +++++K G   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AV+GL+  L++L++ EKRVKSRFS RQI      GFP+      V I    L+LP
Sbjct:   97 VHLNGLLQINDKIALKEITRQLNLENVVGDKVFGS-FAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQY-----VKIFKEQLSLP 237          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: Origin (recognition complex subunit 4 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8R590_GEOSA)

HSP 1 Score: 103 bits (257), Expect = 1.750e-20
Identity = 60/120 (50.00%), Postives = 79/120 (65.83%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI 250
            V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++K G   N  PV+FVLDEF+ FA  K QTLLY L D+ Q      AV+GLS  L+VL++ EKRVKSRFS RQI
Sbjct:   97 VHLNGLLQTNDNIALKEITRQLQLENVVGDKVFGS-FAENLAFLLEALKKGNRTNSCPVLFVLDEFDLFAHHKNQTLLYNLFDISQAAQTPVAVIGLSCRLDVLELLEKRVKSRFSHRQI 215          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: Uncharacterized (protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6K366_ELECQ)

HSP 1 Score: 101 bits (251), Expect = 2.990e-20
Identity = 56/120 (46.67%), Postives = 80/120 (66.67%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI 250
            V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++KTG   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AV+GL+  L+++++ EKRVKSRFS RQI
Sbjct:   17 VHLNGLLQTNDRIALKEITRQLQLENVVGDRVFGS-FAENLAFLLEALKTGDRASSCPVIFLLDEFDLFAHHKNQTLLYNLFDVAQSAQAPVAVIGLTCRLDIMELLEKRVKSRFSHRQI 135          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: Origin (recognition complex subunit 4 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061HY19_CRIGR)

HSP 1 Score: 101 bits (251), Expect = 3.750e-20
Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQLG---ITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQIGFPRQ-DLDTIVSILAGALTLP 271
            V+LNG  Q ND +A+ EI +QL    + G    GS +  NL+ +++++K G   N  PV+F+LDEF+ FA +K QTLLY L D+ Q      AV+GL+  L++L++ EKRVKSRFS RQI      D    + I    L+LP
Sbjct:  114 VHLNGLMQINDKIALTEITRQLNLENVVGDKVFGS-FAENLSFLLEALKKGNRANSCPVIFILDEFDLFAHQKNQTLLYNLFDISQSAQTPVAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFDFPQYMKIFKEQLSLP 254          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: origin (recognition complex subunit 4 isoform X2 n=4 Tax=Monotremata TaxID=9255 RepID=UPI0010A914B3)

HSP 1 Score: 101 bits (251), Expect = 5.520e-20
Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 0
Query:  129 RQPFRAVYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI 250
            R+    V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++K G      PV+F+LDEF+ FA  K QTLLY LLD+ Q      AV+GL+  L++L++ EKRVKSRFS RQI
Sbjct:   24 RENVLQVHLNGLLQTNDRIALKEITRQLQLENVVGDRVFGS-FAENLAFLLEALKRGDRARSCPVLFILDEFDLFAHHKNQTLLYNLLDISQSAQTPVAVIGLTCRLDILELLEKRVKSRFSHRQI 148          
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Match: origin (recognition complex subunit 4 isoform X2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI00038EF082)

HSP 1 Score: 101 bits (252), Expect = 5.610e-20
Identity = 64/147 (43.54%), Postives = 88/147 (59.86%), Query Frame = 0
Query:  135 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI------GFPRQDLDTIVSILAGALTLP 271
            VYLNG  Q ND +A++EI +QL    + G    GS +  N + +++++K G   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AVVGL+  L++L++ EKRVKSRFS RQI      GFP+      V I    L+LP
Sbjct:   96 VYLNGLLQINDKIALKEITRQLHLENVVGDKVFGS-FAENFSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPVAVVGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQY-----VKIFKEQLSLP 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10317.325.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Origin4.740e-17584.53recognition complex subunit 4 n=1 Tax=Ectocarpus s... [more]
Origin1.010e-15171.36recognition complex subunit 4 n=1 Tax=Ectocarpus s... [more]
origin5.190e-2142.55recognition complex subunit 4-like n=1 Tax=Anneiss... [more]
Uncharacterized1.360e-2046.67protein n=1 Tax=Eleutherodactylus coqui TaxID=5706... [more]
origin1.640e-2042.86recognition complex subunit 4 n=1 Tax=Cercocebus a... [more]
Origin1.750e-2050.00recognition complex subunit 4 n=2 Tax=Geotrypetes ... [more]
Uncharacterized2.990e-2046.67protein n=1 Tax=Eleutherodactylus coqui TaxID=5706... [more]
Origin3.750e-2042.96recognition complex subunit 4 n=1 Tax=Cricetulus g... [more]
origin5.520e-2046.03recognition complex subunit 4 isoform X2 n=4 Tax=M... [more]
origin5.610e-2043.54recognition complex subunit 4 isoform X2 n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..130
NoneNo IPR availableGENE3D3.40.50.300coord: 115..253
e-value: 5.6E-18
score: 67.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..64
e-value: 5.1E-5
score: 25.2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 412..431
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..393
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 394..411
IPR016527Origin recognition complex subunit 4PANTHERPTHR12087ORIGIN RECOGNITION COMPLEX SUBUNIT 4coord: 1..431
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10317contigEcto-sp9_F_contig10317:728..4321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10317.325.1mRNA_Ecto-sp9_F_contig10317.325.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10317 728..4321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10317.325.1 ID=prot_Ecto-sp9_F_contig10317.325.1|Name=mRNA_Ecto-sp9_F_contig10317.325.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=432bp
QVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGAT
AAASAVHGKRKRQKKNSPAAGEGGGTGGSGGVSSVEGGGAGQPASSSPHR
HEVEAEEEEEEQAERRQQHKQQQQQQQQRQPFRAVYLNGAAQENDGVAMR
EIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFA
CRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI
GFPRQDLDTIVSILAGALTLPGGNDQDDDDEGGESPPPPPGVSAAFVRDF
NAVTRQTLGGAKNGVTSSAANSSGGGGGSGSGAQRSASLALPDLKDLAAS
GRSVGWFLRLASTAVGLLRDDEKGVTRRALARAGEMLAPDSHSLALRSLS
VTQALVLVAIVRLERRGRKKDGCSFEAVFRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016527ORC4
IPR027417P-loop_NTPase