prot_Ecto-sp9_F_contig9980.18046.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9980.18046.1
Unique Nameprot_Ecto-sp9_F_contig9980.18046.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length270
Homology
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 2.550e-145
Identity = 254/291 (87.29%), Postives = 255/291 (87.63%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV--------------------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYNFVPSSRGXXXXXXXXXXXXXX-RNDAGGDGPDAVRQEAGEARRAIGTMLDDLRASEAEARARGEEGTMDDPAGGGXXXXALGTAEGRDGAADEVLRQVLEREQGAGEGAAGGVGRVLGGRRNGPTVDEIL 270
            RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV                    IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYNFVPSSRG               RNDAGGDGPDAVRQEAGEARRAIGTMLDDLRASEAEARARGEEGTMDDP+GG XXXXALGTAEGRDGAADEVLRQVLEREQGAGEGAAGGVGRVLGGRRNGPTVDEIL
Sbjct: 1249 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVVGXXXXXXXXXXDFSTREKEVIHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYNFVPSSRGGGGAEGDTAVAAAAARNDAGGDGPDAVRQEAGEARRAIGTMLDDLRASEAEARARGEEGTMDDPSGGXXXXXALGTAEGRDGAADEVLRQVLEREQGAGEGAAGGVGRVLGGRRNGPTVDEIL 1539          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Proteasome (component ECM29 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SLE9_9CHLO)

HSP 1 Score: 133 bits (334), Expect = 5.670e-32
Identity = 62/145 (42.76%), Postives = 98/145 (67.59%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDP 139
            RGA+FG  A I +++ E     +  ++P+LFRY++DP+ +   AM  +W A+V      + ++L A+  ELL+ +G R WR+R+++CAGLSD+L+GR W E+ P  E +W MA R +DDIKESV +AA +  +T+  +++RLCDP
Sbjct:  150 RGAAFGF-ASIARLAGERLAPHVAALIPKLFRYQYDPNPRVADAMRHIWHALVADPKSAVDAHLDAVCAELLKEMGGRLWRNREASCAGLSDLLQGRRWAEVSPRFEEVWVMALRAVDDIKESVRQAAAKLLRTLRGLTLRLCDP 293          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: ARM (repeat-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BTC4_9FUNG)

HSP 1 Score: 130 bits (327), Expect = 1.700e-30
Identity = 66/145 (45.52%), Postives = 91/145 (62.76%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDP 139
            RGAS G G+I      E     L +IVP+L+R++FDP+AK   +M  +WR++V      +  N   II +LL+ LGDR+WR R+S+C  LSD++ GR   +I P+L+  W M  R LDDIKESV  AA    KT+ N++VR CDP
Sbjct: 1160 RGASMGFGSIAALAERE-LAPYLSQIVPKLYRFQFDPNAKVAESMKSIWRSLVKDPKKAVDENFDLIIKDLLKGLGDRQWRTRESSCLALSDIMHGRQLAQIKPYLQETWAMCFRALDDIKESVRVAAFTACKTLTNVTVRYCDP 1303          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Uncharacterized (protein (Fragment) n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LQH0_9CHLO)

HSP 1 Score: 128 bits (322), Expect = 7.950e-30
Identity = 64/151 (42.38%), Postives = 94/151 (62.25%), Query Frame = 0
Query:    1 RGASFGLGAIINQVS------AEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDP 139
            RGA+FG   I    S       EA    L  +VP+L+RY  DP+ +   AM  +WR++V      +  + +AI+T+LLR +G R WR+RQ+AC+ L D+L+GR W E+ P+L  +WTM  R LDDIK+SV  AA+  ++TV  +++RL DP
Sbjct: 1185 RGAAFGFAGIARLASRGGGAPGEALAKHLAVLVPKLYRYTHDPNPRVAEAMVAIWRSLVDDPRVTLDKHFAAIMTDLLREMGGRLWRNRQAACSALGDLLQGRRWPELSPYLSQIWTMTFRALDDIKDSVRRAALSLARTVRGLTLRLADP 1335          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9W296_9CHLO)

HSP 1 Score: 124 bits (311), Expect = 9.210e-30
Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYNFVPSS 146
            RGA+FG   I     A+     +  +VP+L+RY++DP+ + + AM  +WRA+V      I  + +AI+ ELLR +G R WR RQ+ACA L+D+L+GR + E+ P++E +WTM  R LDDIKE+V   AV   + V  +++RL DP  F PS+
Sbjct:   92 RGAAFGFAGIARLAGAQ-LAPHVAALVPKLYRYQYDPNPRVQDAMAHIWRALVDDPRKTIDEHFAAIMRELLREMGGRLWRGRQAACAALADLLQGRRYAEVAPYMEEVWTMTLRCLDDIKETVRTQAVALVRCVRGLTLRLVDP-QFTPSA 241          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Proteasome-associated (ECM29-like protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VC99_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 4.990e-29
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYNFVPSSRG 148
            RGA+FG  A I +++ E  G  + RI+PRL+RY +DP+ K R AM  +W A++      +  N  AI+  LL  LG  +WR R++A   +SD+L+GR WDE+ PH   LW M  R +DDIKESV  A V  +++V  +++RL DP    P S+G
Sbjct: 1360 RGAAFGF-ASIAKLAGEQLGPHIARILPRLYRYLYDPNGKVRDAMSHIWHALLDDPKAAVAQNFDAIMKALLADLGGGQWRVREAAALAMSDLLQGRRWDELAPHFAALWEMTLRVMDDIKESVRVAGVALARSVRGLTLRLVDP-ELTPPSQG 1511          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FAM2_9FUNG)

HSP 1 Score: 125 bits (314), Expect = 9.070e-29
Identity = 62/145 (42.76%), Postives = 91/145 (62.76%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDP 139
            RGAS G G+I      E     L +IVP+L+R++FDP+AK   +M  +WR++V      +  +   I+ +LL+ LGDR WR R+S+C  LS++L GR  D++ P L+ +W+M  R LDDIKESV  AA    KT+  ++V+ CDP
Sbjct: 1142 RGASMGFGSIAALAERE-LAPYLNQIVPKLYRFQFDPNAKVAESMKSIWRSLVKDPKKAVDDHFDVIVKDLLKGLGDRMWRTRESSCLALSELLHGRQLDQVKPFLQEVWSMCFRALDDIKESVRVAAFATCKTLTGVTVKYCDP 1285          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Uncharacterized (protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PDC1_BATDJ)

HSP 1 Score: 125 bits (313), Expect = 1.260e-28
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYN 141
            RGAS G  +I  Q   E     L  +VPRL+RY+FDP+ K   +M  +WRA+V      + + +  I+ ++L +LGDR WR R+++CA L+D L GR   E+ P+L+ LWTM  R LDDIKE+V  AA    KT+  ++VR CDP N
Sbjct: 1588 RGASMGFESIAAQAERE-LQQHLPSLVPRLYRYQFDPNQKVAESMKNIWRALVKNPKKAMDTYMDLILEDILNSLGDRMWRTREASCAALADFLSGRQMSEMEPYLQRLWTMCFRALDDIKETVRNAAFLTCKTLTKMTVRYCDPSN 1733          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X924_9CHLO)

HSP 1 Score: 124 bits (312), Expect = 1.690e-28
Identity = 63/149 (42.28%), Postives = 100/149 (67.11%), Query Frame = 0
Query:    1 RGASFGLGAIINQVSAEAFGGQL----GRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDP 139
            RGA+FG+  I     A   GGQL    G ++P+L+RY++DP+ K + AM+ +WR++V      I  + +AI+ +L++ +G R WR+RQ++ A L D+L+GR W+E+ P  E +W+MA R LDDIKE+V   A+   K+++N++VRL DP
Sbjct: 1252 RGAAFGIAGI-----ARLAGGQLASHMGSLIPKLYRYQYDPNQKVQDAMEHIWRSIVDEPRKAIDEHFAAIMQDLVKEMGGRLWRNRQASAAALLDLLQGRRWNELKPFYENIWSMALRCLDDIKETVRRQAILLVKSLSNLTVRLVDP 1395          
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DTH4_CHLRE)

HSP 1 Score: 124 bits (312), Expect = 1.690e-28
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 0
Query:   23 LGRIVPRLFRYRFDPSAKTRAAMDQLWRAVV------IHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHLEMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDP 139
            L  ++P+L+RY  DP+ K   AM  +WRA+V      +  +  AI+ +LLR  G R WR+RQ+ACA LSD+L+GR W E+ PH   LWTM  R +DDIKESV  AA++ ++TV  +++RL DP
Sbjct: 1682 LSTLIPKLYRYTHDPNPKVAEAMVAIWRALVDDPRATLDKHFGAIMIDLLREAGGRLWRNRQAACAALSDLLQGRRWPELAPHFGQLWTMTLRAMDDIKESVRRAALQLARTVRGLTLRLADP 1804          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9980.18046.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.550e-14587.29protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM84... [more]
Proteasome5.670e-3242.76component ECM29 (Fragment) n=1 Tax=Tetraselmis sp.... [more]
ARM1.700e-3045.52repeat-containing protein n=1 Tax=Rhizoclosmatium ... [more]
Uncharacterized7.950e-3042.38protein (Fragment) n=4 Tax=Volvox reticuliferus Ta... [more]
Hypothetical9.210e-3042.76protein (Fragment) n=1 Tax=Chlamydomonas euryale T... [more]
Proteasome-associated4.990e-2942.86ECM29-like protein n=1 Tax=Micractinium conductrix... [more]
Uncharacterized9.070e-2942.76protein n=1 Tax=Chytriomyces confervae TaxID=24640... [more]
Uncharacterized1.260e-2844.22protein n=2 Tax=Batrachochytrium dendrobatidis Tax... [more]
Uncharacterized1.690e-2842.28protein n=1 Tax=Chlamydomonas eustigma TaxID=11579... [more]
Uncharacterized1.690e-2847.15protein n=1 Tax=Chlamydomonas reinhardtii TaxID=30... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..133
e-value: 3.8E-6
score: 28.6
NoneNo IPR availablePANTHERPTHR23346TRANSLATIONAL ACTIVATOR GCN1-RELATEDcoord: 1..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
IPR024372Proteasome component Ecm29PANTHERPTHR23346:SF19PROTEASOME ADAPTER AND SCAFFOLD PROTEIN ECM29coord: 1..139
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9980contigEcto-sp9_F_contig9980:2056..4013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9980.18046.1mRNA_Ecto-sp9_F_contig9980.18046.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9980 2056..4015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9980.18046.1 ID=prot_Ecto-sp9_F_contig9980.18046.1|Name=mRNA_Ecto-sp9_F_contig9980.18046.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=270bp
RGASFGLGAIINQVSAEAFGGQLGRIVPRLFRYRFDPSAKTRAAMDQLWR
AVVIHSNLSAIITELLRALGDRKWRDRQSACAGLSDVLRGRSWDEIGPHL
EMLWTMADRGLDDIKESVAEAAVEYSKTVANISVRLCDPYNFVPSSRGGG
GAEGDTAAAAAARNDAGGDGPDAVRQEAGEARRAIGTMLDDLRASEAEAR
ARGEEGTMDDPAGGGGGGGALGTAEGRDGAADEVLRQVLEREQGAGEGAA
GGVGRVLGGRRNGPTVDEIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR024372Ecm29
IPR016024ARM-type_fold