prot_Ecto-sp9_F_contig9958.18021.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9958.18021.1
Unique Nameprot_Ecto-sp9_F_contig9958.18021.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length529
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9958.18021.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK9_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.370e-49
Identity = 153/179 (85.47%), Postives = 155/179 (86.59%), Query Frame = 0 
Query:  351 PVSETXXVAPTPVIPTLLPVATPPEPPAASDSLQPVVAPPTASATVTNAPVDAAQPVAPGTIQXXXXXXXVXPAAAPTALAPSAEPVIGVQPSVSPVAAPSATIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTVTITTSPAAVPGAPTAEPALAPVVPLPPGQTAAPAARDLP 529
            PVSETXX      IPTLLPVATPPEPPAASDSLQPVVAPPTAS  +TNAPVDAAQPVAPGT  XXXXXXX XPA APTALAPSAEPVIGVQPSV PVAAPSATIGQ+PTVDPIAVVPSPPXXXXXXXXXXXXXXXXXX  TITTSPAAVPGAPTAEPALAP         AAPAARDLP
Sbjct: 1107 PVSETXXXXXXXXIPTLLPVATPPEPPAASDSLQPVVAPPTASGALTNAPVDAAQPVAPGTTXXXXXXXXXXPATAPTALAPSAEPVIGVQPSVPPVAAPSATIGQEPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXXXTITTSPAAVPGAPTAEPALAPXXXXXXXXXAAPAARDLP 1285
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BLAST of mRNA_Ecto-sp9_F_contig9958.18021.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG77_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.680e-21
Identity = 106/145 (73.10%), Postives = 106/145 (73.10%), Query Frame = 0 
Query:  385 PVVAPPTASATVTNAPVDAAQPVAPGTIQXXXXXXXVXPAAAPTALAPSAEPVIGVQPSVSPVAAPSATIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTVTITTSPAAVPGAPTAEPALAPVVPLPPGQTAAPAARDLP 529
            PVVAP TASA VTNAPVDAAQPVAPGTI  XXXXX V  A APTAL                    SA IGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXT TIT SPAAVPGAPTAEPALAP        TAAPAARDLP
Sbjct:  646 PVVAP-TASAAVTNAPVDAAQPVAPGTIPPXXXXXTVPXATAPTALXXXXXXXXXXXXXXXXXXXXSAAIGQDPTVDPIAVVPSPPXXXXXXXXXXXXXXXXXXTTTITNSPAAVPGAPTAEPALAPXXXXXXXXTAAPAARDLP 789
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9958.18021.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.370e-4985.47protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.680e-2173.10protein (Fragment) n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9958contigEcto-sp9_F_contig9958:1535..4003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9958.18021.1mRNA_Ecto-sp9_F_contig9958.18021.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9958 1535..4003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9958.18021.1 ID=prot_Ecto-sp9_F_contig9958.18021.1|Name=mRNA_Ecto-sp9_F_contig9958.18021.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=529bp
ATATTQPATAPTPTLTAPPATGTTQPVSAPTPTVTAPPATATTQPATAPT
PTLTAPPATGTSPPATAPVTAPTPTATAPPATATAQPVTAPTPTATAPPA
TATTPPVTAPTPTATAPPAAATTQPVAAPVTAPTPTVTTPPATGTTQPVS
APTPAVTAPPATATTQPATAPTPTVTAPPATGTTQPVSAPTPTATAPPAT
GTTQPVSAPTPTATAPTPTVTAPPATGTTQPVTAPSPTVTTPPATGTTQP
ATAPDTAPTPAVTTPPATGTTQPVTAPTPTGTTPPATGTEPPAVAPTPVT
APTARGTSPPATTPVTAPPATGTTPPATAPTQPVTAPPVTGTSPPASAPT
PVSETPAVAPTPVIPTLLPVATPPEPPAASDSLQPVVAPPTASATVTNAP
VDAAQPVAPGTIQPVAPGTTVPPAAAPTALAPSAEPVIGVQPSVSPVAAP
SATIGQDPTVDPIAVVPSPPPAAVVPSPPPAPVVGAPPTVTITTSPAAVP
GAPTAEPALAPVVPLPPGQTAAPAARDLP
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