prot_Ecto-sp9_F_contig9259.17419.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9259.17419.1
Unique Nameprot_Ecto-sp9_F_contig9259.17419.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length348
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9259.17419.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7N3_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 5.120e-154
Identity = 296/359 (82.45%), Postives = 300/359 (83.57%), Query Frame = 0 
Query:    1 QVHVDDENEEIYFAPVAEIGSGDSSSGDGVGGGEAXXXXXXXXXXXXXXXXXXXXXX---------TARYGCDPRNAWAPWGYAVVTVEGRTVLDVVPPTIAFSETLVTTRSDLDPFLHVEALTYDPGSGGIGGXXXXXXXXXXXXXXXXXXPEGSVGGGGGGQFLTFGLSSRNSAVVGSAFLVVGLLLLVQPVLALKAWXXXXXXXXXXXXXXXXXXXXANGGRSGRGGKLRGQWRYGQLETDWDDGSEFLDGGVYEGEDDDDDGWGSEGDWQGEKSSGVGMPPSPSEGDHFQASATPRLGRRFMQDSLRRRAADGGALGTXXXXXXXXXXT---RGDAGGIQLGPMGKSGRGEANLI 347
            QVHVDD N EI FAPVAEIGSGDSSSG        XXXXXXXXXXXXXXXXXXXXXX         TARYGCDPRNAW+PWGYAVVTVEGRTVLDVVPPTI FS+TLVTTRSDLDPFLHVEALTYDP SGGIGG XXXXXXX          PEGSVGGGGGGQFLTFGLSS NSAVVGSAFLVVGLLLLVQPVLALKAW               XXXXX    RSGRGGKLRGQWRYGQLETDWDDGSEF+DGGVYEGEDDDDDGWGSEGDWQGE SSGVG PPSPSEG+HFQASATPRLGRRFMQDSLRRRAADGGALGTXXXXXXXXXX    RGDAGGIQLGPMGKSGRGEANLI
Sbjct:   14 QVHVDDNNGEISFAPVAEIGSGDSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETARYGCDPRNAWSPWGYAVVTVEGRTVLDVVPPTITFSKTLVTTRSDLDPFLHVEALTYDPSSGGIGGGXXXXXXXAEGASGEGISPEGSVGGGGGGQFLTFGLSSWNSAVVGSAFLVVGLLLLVQPVLALKAWWREGGVGSDEGGPTGXXXXXXXXXRSGRGGKLRGQWRYGQLETDWDDGSEFVDGGVYEGEDDDDDGWGSEGDWQGETSSGVGRPPSPSEGNHFQASATPRLGRRFMQDSLRRRAADGGALGTXXXXXXXXXXXXXIRGDAGGIQLGPMGKSGRGEANLI 372
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9259.17419.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized5.120e-15482.45protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7N3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..347
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9259contigEcto-sp9_F_contig9259:1521..4787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9259.17419.1mRNA_Ecto-sp9_F_contig9259.17419.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9259 1521..4787 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9259.17419.1 ID=prot_Ecto-sp9_F_contig9259.17419.1|Name=mRNA_Ecto-sp9_F_contig9259.17419.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=348bp
QVHVDDENEEIYFAPVAEIGSGDSSSGDGVGGGEAGEQTEQTEQEEEEEE
EEEEEEETARYGCDPRNAWAPWGYAVVTVEGRTVLDVVPPTIAFSETLVT
TRSDLDPFLHVEALTYDPGSGGIGGGAAAGGGGAEGASGEGISPEGSVGG
GGGGQFLTFGLSSRNSAVVGSAFLVVGLLLLVQPVLALKAWWREGGGDSD
EGGPAGGGGGGANGGRSGRGGKLRGQWRYGQLETDWDDGSEFLDGGVYEG
EDDDDDGWGSEGDWQGEKSSGVGMPPSPSEGDHFQASATPRLGRRFMQDS
LRRRAADGGALGTGGGGGGGGGGTRGDAGGIQLGPMGKSGRGEANLI*
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