prot_Ecto-sp9_F_contig10054.92.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10054.92.1
Unique Nameprot_Ecto-sp9_F_contig10054.92.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length243
Homology
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 2.880e-126
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAAAAM 210
            +RAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPL HHLLAGNELHPIMDNFGKFESNGYNAAAAM
Sbjct:  450 ERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHHLLAGNELHPIMDNFGKFESNGYNAAAAM 645          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: DEAD (box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 393 bits (1009), Expect = 2.900e-123
Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAAAAM 210
            +RAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPL H+LLAGNELHPIMDNFGKFESNGYNAAAAM
Sbjct:  605 ERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLEHNLLAGNELHPIMDNFGKFESNGYNAAAAM 800          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN6_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.220e-107
Identity = 154/179 (86.03%), Postives = 166/179 (92.74%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPI 192
            +R ECVFV+AHTSAGKTVVAEYAIA+A  HMTRAIYTSPIKALSNQKYRDFK RFGD VGLITGDVSINPEASCLIMTTEILRSMLYRGAD++RDIEWVIFDEVHY+ND+ERGVVWEEVIIMLPEHA MIFLSATTPNT+EF DWIGRTK+KPVHVITT YRPVPL H + AG E+H +
Sbjct:   54 ERRECVFVAAHTSAGKTVVAEYAIALAAAHMTRAIYTSPIKALSNQKYRDFKKRFGDDVGLITGDVSINPEASCLIMTTEILRSMLYRGADIVRDIEWVIFDEVHYINDTERGVVWEEVIIMLPEHAGMIFLSATTPNTIEFSDWIGRTKKKPVHVITTDYRPVPLQHFIYAGGEMHKV 232          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTP8_9STRA)

HSP 1 Score: 323 bits (827), Expect = 8.280e-99
Identity = 154/197 (78.17%), Postives = 177/197 (89.85%), Query Frame = 0
Query:   13 HCQRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAA 207
            H +  ECVF++AHTSAGKTVVAEYAIAM+Q+HMTR +YTSPIKALSNQKYRDF+T+FG  +VGLITGDVSINPEASCL+MTTEILRSMLYRGAD+IRDIEWVIFDE+HY+NDSERGVVWEEVIIMLPEH +M+FLSATTPNT EF DWIGRTK+K +HVI+TT RPVPLGHHL AG E+ PI+DN  +F +N +  A
Sbjct:  399 HLENHECVFIAAHTSAGKTVVAEYAIAMSQKHMTRTVYTSPIKALSNQKYRDFRTKFGVDNVGLITGDVSINPEASCLVMTTEILRSMLYRGADVIRDIEWVIFDEIHYLNDSERGVVWEEVIIMLPEHVSMVFLSATTPNTFEFSDWIGRTKQKKIHVISTTKRPVPLGHHLYAGGEIIPIVDNSNQFLTNNHAKA 595          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: DEAD/DEAH (box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLM2_9STRA)

HSP 1 Score: 318 bits (815), Expect = 4.590e-97
Identity = 152/197 (77.16%), Postives = 176/197 (89.34%), Query Frame = 0
Query:   13 HCQRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAA 207
            H +  +CVF++AHTSAGKTVVAEYAIAM+Q+HMTR IYTSPIKALSNQKYRDF+T+FG  +VGLITGDVSINP+ASCL+MTTEILRSMLYRGAD+IRDIEWVIFDE+HY+NDSERGVVWEEVIIMLPEH +M+FLSATTPNT EF DWIGRTK+K +HVI+T  RP+PL HHL AG E+ P+MD  G+F S  Y+AA
Sbjct:  408 HLENHDCVFIAAHTSAGKTVVAEYAIAMSQKHMTRTIYTSPIKALSNQKYRDFRTKFGVDNVGLITGDVSINPQASCLVMTTEILRSMLYRGADVIRDIEWVIFDEIHYLNDSERGVVWEEVIIMLPEHVSMVFLSATTPNTFEFSDWIGRTKQKKIHVISTHKRPIPLSHHLYAGGEVLPVMDPQGQFLSANYSAA 604          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Uncharacterized (protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8M6_9STRA)

HSP 1 Score: 317 bits (813), Expect = 9.190e-97
Identity = 152/194 (78.35%), Postives = 174/194 (89.69%), Query Frame = 0
Query:   13 HCQRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG--DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGY 204
            H +  ECVF++AHTSAGKTVVAEYAIAM+Q+HMTR IYTSPIKALSNQKYRDF+T+FG  +VGLITGDVSINPEASCL+MTTEILRSMLYRGAD+IRDIEWV+FDE+HY+NDSERGVVWEEVIIMLPEH +M+FLSATTPNT EF DWIGRTK+K +HVI+T  RPVPLGHHL AG E+ PI+D   +F SN +
Sbjct:  407 HLENHECVFIAAHTSAGKTVVAEYAIAMSQKHMTRTIYTSPIKALSNQKYRDFRTKFGQDNVGLITGDVSINPEASCLVMTTEILRSMLYRGADVIRDIEWVVFDEIHYLNDSERGVVWEEVIIMLPEHVSMVFLSATTPNTFEFSDWIGRTKQKKIHVISTFKRPVPLGHHLYAGGEIIPIVDANNQFLSNSH 600          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLR1_THAOC)

HSP 1 Score: 317 bits (812), Expect = 2.440e-96
Identity = 153/195 (78.46%), Postives = 174/195 (89.23%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAAA 208
            +R+ECVF++AHTSAGKTV AEYAIA+A +H TRAIYTSPIKALSNQKYRDFK++FGD VGLITGD+ I  + SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLPE+ N+IFLSATTPNT+EF +WIGRTKRKPVHVI T YRPVPL H+L AG +LH I++  G F++ GY AAA
Sbjct:  424 ERSECVFLAAHTSAGKTVSAEYAIALAMKHCTRAIYTSPIKALSNQKYRDFKSKFGDDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPEYVNLIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHNLWAGGKLHKILEGKGAFDTKGYTAAA 618          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTK5_9STRA)

HSP 1 Score: 312 bits (799), Expect = 4.610e-96
Identity = 151/194 (77.84%), Postives = 169/194 (87.11%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAA 207
            +R ECVFV+AHTSAGKTV AEYAIA+A++H TRAIYTSPIKALSNQKYRDF+ +FGD VGLITGD+ I  ++SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLP++ N+IFLSATTPNT+EF DWIGRTKRKPVHVI T YRPVPL HHL AG +LH +M+    F   GY  A
Sbjct:   41 ERGECVFVAAHTSAGKTVCAEYAIALARKHCTRAIYTSPIKALSNQKYRDFRDKFGDDVGLITGDLQIGADSSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPDYVNLIFLSATTPNTIEFSDWIGRTKRKPVHVIRTDYRPVPLSHHLYAGQKLHKVMEGKSGFLEKGYKDA 234          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KL30_9STRA)

HSP 1 Score: 315 bits (806), Expect = 2.030e-95
Identity = 150/195 (76.92%), Postives = 175/195 (89.74%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFG-DVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAAA 208
            ++ +CVF++AHTSAGKTV AEYA+A+A++H TRAIYTSPIKALSNQKYRDF+++FG DVGLITGD+ I  + SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLPE+ NMIFLSATTPNT+EF +WIGRTKRKPVHVI T YRPVPL HHL AG+++H IM+    F+S GY+AA+
Sbjct:  462 EKRQCVFLAAHTSAGKTVCAEYAVALAKRHCTRAIYTSPIKALSNQKYRDFRSKFGEDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPEYVNMIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHHLWAGHKMHKIMEGKQGFDSKGYSAAS 656          
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS27_THAPS)

HSP 1 Score: 308 bits (788), Expect = 2.930e-95
Identity = 149/195 (76.41%), Postives = 170/195 (87.18%), Query Frame = 0
Query:   15 QRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIKALSNQKYRDFKTRFGD-VGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFESNGYNAAA 208
            +R+ECVF++AHTSAGKTV AEYAIA+A +H TRAIYTSPIKALSNQKYRDF+ +FGD VGLITGD+ I  + SCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHY+NDSERGVVWEEVIIMLP++ N+IFLSATTPNT+EF +WIGRTKRKPVHVI T YRPVPL H+L AG +LH +M+    F   GY+ AA
Sbjct:   29 ERSECVFLAAHTSAGKTVCAEYAIALAMKHCTRAIYTSPIKALSNQKYRDFRNKFGDDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPDYVNLIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHNLWAGMKLHKLMEGREGFNPKGYSEAA 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10054.92.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.880e-12698.98protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
DEAD2.900e-12398.47box helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
P-loop3.220e-10786.03containing nucleoside triphosphate hydrolase prote... [more]
Uncharacterized8.280e-9978.17protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
DEAD/DEAH4.590e-9777.16box RNA helicase n=1 Tax=Achlya hypogyna TaxID=120... [more]
Uncharacterized9.190e-9778.35protein n=3 Tax=Aphanomyces invadans TaxID=157072 ... [more]
Uncharacterized2.440e-9678.46protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
Hypothetical4.610e-9677.84protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
Hypothetical2.030e-9576.92protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Uncharacterized2.930e-9576.41protein (Fragment) n=1 Tax=Thalassiosira pseudonan... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 3..183
e-value: 2.1E-19
score: 80.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 11..167
score: 21.015
NoneNo IPR availableGENE3D3.40.50.300coord: 1..175
e-value: 3.1E-69
score: 234.1
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 12..213
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 12..213
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 18..153
e-value: 8.5E-17
score: 61.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 18..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10054contigEcto-sp9_F_contig10054:730..3192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10054.92.1mRNA_Ecto-sp9_F_contig10054.92.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10054 730..3192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10054.92.1 ID=prot_Ecto-sp9_F_contig10054.92.1|Name=mRNA_Ecto-sp9_F_contig10054.92.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=243bp
FAAVPIASNYRYHCQRAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIY
TSPIKALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLY
RGADLIRDIEWVIFDEVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTP
NTVEFCDWIGRTKRKPVHVITTTYRPVPLGHHLLAGNELHPIMDNFGKFE
SNGYNAAAAMLMSKEDKKAAAGRGGQRGGGGRGGRGGGRGGGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase