prot_Ecto-sp9_F_contig11045.916.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11045.916.1
Unique Nameprot_Ecto-sp9_F_contig11045.916.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length311
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11045.916.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G235_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 2.300e-172
Identity = 266/311 (85.53%), Postives = 270/311 (86.82%), Query Frame = 0 
Query:    1 MTSLSWDDEEETAASNVRWQGRTLINFVAGRSRLRALPVVIHILPKDIEWFSADASLFDELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIESANGGSXXXXXXXXXXXXXXXXXXXXXXXXXXPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSKPAAADQEALDVEAIGRRSGAGTGATVGVQEGPRNAGLLTWLWGGGGDXXXXXXXXVKGGVRQHFIGSASWQGKSPSEQRREDDD-DIQRAIALSLAVEPRAEGGGIEESKG 310
            M S+SWDDEEETAASNVRWQGRTLINFVAGRSRLR LPVVIHILPKDI WFSADASLFDELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIE AN GS                XXXXXXX   PAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTS PAAADQEALDVEAIGRRSGAGTGATV VQ GPR+ GLLTWLWG GG+        VKGGVRQHFIGSASWQGKSPSEQRRE    DIQRAIALSLAVEPRAEGGG+EESKG
Sbjct:    1 MASVSWDDEEETAASNVRWQGRTLINFVAGRSRLRTLPVVIHILPKDIGWFSADASLFDELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIERANRGSSSAGSSKGKRCVGSNSXXXXXXX---PAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSTPAAADQEALDVEAIGRRSGAGTGATVDVQGGPRDTGLLTWLWGVGGEGGGSAAGGVKGGVRQHFIGSASWQGKSPSEQRREXXXXDIQRAIALSLAVEPRAEGGGVEESKG 308
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BLAST of mRNA_Ecto-sp9_F_contig11045.916.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.890e-24
Identity = 65/203 (32.02%), Postives = 111/203 (54.68%), Query Frame = 0 
Query:    5 SWDDEEETAASNVRWQGRTLINFVAGRSRLRAL-PVVIHILPKDIEWFSADAS-LFDELKLLLRERVIS------ATGNGDKDAEAPK-----SRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIESANGGSXXXXXXXXXXXXXXXXXXXXXXXXXXPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQF 194
            S +D +   + +  WQ R  IN + G +R + + P+V+H+LP+D+ W++A +  L++EL+ LL+++VI+      +   GD++ E        SR++AR+ E C+QGE LQFT+R+R T P Y+++++  + + +A                              PA+  LPL+E+TLL WV+ FD  +PY P+P E    F
Sbjct:    5 SRNDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITF--NSVPAAT------------------QQQQTASKQAAPAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11045.916.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.300e-17285.53protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G235... [more]
Uncharacterized2.890e-2432.02protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 281..300
score: 9.408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11045contigEcto-sp9_F_contig11045:1982..3658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11045.916.1mRNA_Ecto-sp9_F_contig11045.916.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11045 1982..3658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11045.916.1 ID=prot_Ecto-sp9_F_contig11045.916.1|Name=mRNA_Ecto-sp9_F_contig11045.916.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=311bp
MTSLSWDDEEETAASNVRWQGRTLINFVAGRSRLRALPVVIHILPKDIEW
FSADASLFDELKLLLRERVISATGNGDKDAEAPKSRKRARKEEVCIQGER
LQFTYRYRKTLPRYTVLSYTGDDIESANGGSSSAGSSKGKRSVGSNSSGG
GGGGGGGPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQFASSTSK
PAAADQEALDVEAIGRRSGAGTGATVGVQEGPRNAGLLTWLWGGGGDGGG
SAAGGVKGGVRQHFIGSASWQGKSPSEQRREDDDDIQRAIALSLAVEPRA
EGGGIEESKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003903UIM_dom