prot_Ecto-sp9_F_contig9992.18056.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9992.18056.1
Unique Nameprot_Ecto-sp9_F_contig9992.18056.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length113
Homology
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEY0_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 6.220e-72
Identity = 105/112 (93.75%), Postives = 106/112 (94.64%), Query Frame = 0
Query:    1 MVRRRSWEGGLLPAGGRAWRVGALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112
            MVRRRSW GGLLP GGRAWR GALCCLYGLLLLGR VEANDINHKYHDGESVIVWVNTVGPW NPQESYPYYRLPFCVP LV+GTKQKRPSGLGELLAGNELRNSGMDVKFK
Sbjct:    1 MVRRRSWGGGLLPTGGRAWRAGALCCLYGLLLLGRFVEANDINHKYHDGESVIVWVNTVGPWNNPQESYPYYRLPFCVPGLVDGTKQKRPSGLGELLAGNELRNSGMDVKFK 112          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.070e-68
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0
Query:    1 MVRRRSWEGGLLPAGGRAWRVGALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112
            MVRRRS  GGLLPAGG AWRVGAL C+YGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYY LPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK
Sbjct:    1 MVRRRSSRGGLLPAGGGAWRVGALWCVYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYHLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1C0_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.210e-24
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 0
Query:   19 WRVGALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKF 111
            W   AL        L   + A++ NHKY  G+ V +WVN +GP+YNPQE+Y YY+LPFC P+L  GT++KR +G+GE+L G+ELR+SG D+KF
Sbjct:   29 WAKKALAAFIFAGTLPSIILASERNHKYEVGDPVNLWVNKIGPYYNPQETYAYYKLPFCKPELGLGTRKKR-AGIGEILEGHELRHSGYDIKF 120          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 8.690e-23
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   37 VEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKF 111
            V A + NHKY  GE + VWVN VGP++NPQE+YPYYRLPFC PD+   +K+KR  G+GE+LAGN+LR+SG  ++F
Sbjct:   19 VLAGENNHKYTPGERMTVWVNKVGPYFNPQETYPYYRLPFCRPDMGVESKRKR-QGMGEILAGNDLRDSGFSLQF 92          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XBE8_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 5.790e-22
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   18 AWRVGALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRP-SGLGELLAGNELRNSGMDVKFK 112
            AW   A   ++G++ L   VEA++  HKY DGE V ++VN VGP+ NPQE+Y YY LPFC P    G K KR   GLGE+L GNEL +S + ++FK
Sbjct:    3 AWLWRAFALVFGIVAL---VEADESTHKYADGEVVKLYVNKVGPYNNPQETYNYYELPFCKPPEALGHKPKRKWGGLGEVLQGNELIDSEIQIQFK 95          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JKR6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.160e-19
Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    5 RSWEG------GLLPAGGRAWRVGALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112
            R W G      G  P   R  R   L  L GL         +D++HKY   E+V++WVN VGP++NPQE+YPY+ LPFC P     TK++R + LGE+L G+ELRNSG+ + F+
Sbjct:    9 RRWAGRKIGGSGGFPLVARMLRSVLLVALLGL----PGAAGDDVSHKYESWENVVLWVNKVGPYHNPQETYPYFSLPFCKPSDGVKTKKRR-AHLGEVLDGHELRNSGISIDFQ 117          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3L6_9CHLO)

HSP 1 Score: 92.4 bits (228), Expect = 1.550e-19
Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 0
Query:   23 ALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112
            ALCC+  + +    VEA++ +HKY DGE V +WVN VGP+ NPQE+Y YY LPFC P      K K   GLGE+L GNEL +S ++VKFK
Sbjct:    9 ALCCIACIGV----VEADEHSHKYKDGEPVRLWVNKVGPYDNPQETYNYYYLPFCAPKEAGKPKHKW-GGLGEVLQGNELIDSQLEVKFK 93          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2ME78_RHIMU)

HSP 1 Score: 85.5 bits (210), Expect = 2.060e-19
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   30 LLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112
            LLLL  +  A++ +H+Y   E V +WVN VGP+ NPQE+Y YY LPFC P    G    +  GLGE+L GNEL  S +D+KF+
Sbjct:   19 LLLLSDAALASESDHRYQQDEKVTLWVNKVGPYNNPQETYNYYSLPFCHPS---GNPAHKWGGLGEVLGGNELIESQIDIKFQ 98          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XAT7_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 2.110e-19
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   18 AWRVGALCCLYGLLLLGRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRP-SGLGELLAGNELRNSGMDVKFK 112
            AW   A   ++G++ L   VEA++  HKY DGE V ++VN VGP+ NPQE+Y YY LPFC P    G K KR   GLGE+L GNEL +S + ++FK
Sbjct:    3 AWLWRAFALVFGIVAL---VEADESTHKYADGEVVKLYVNKVGPYNNPQETYNYYELPFCKPPEALGHKPKRKWGGLGEVLQGNELIDSEIQIQFK 95          
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Match: Transmembrane (9 superfamily member (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9USY3_DIALT)

HSP 1 Score: 86.3 bits (212), Expect = 4.000e-19
Identity = 37/79 (46.84%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   34 GRSVEANDINHKYHDGESVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGNELRNSGMDVKFK 112
            G  V A++ +H+Y DGE + +W N +GP++NPQE+Y ++ LPFC  D +   + K   GLGE+L GN+L NSG+D+ FK
Sbjct:   21 GAVVRADEASHQYADGEPIKLWANKIGPYHNPQETYNFFALPFCSDDDLANVEHKW-GGLGEVLEGNDLVNSGLDMSFK 98          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9992.18056.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Transmembrane6.220e-7293.759 superfamily member n=1 Tax=Ectocarpus siliculosu... [more]
Transmembrane1.070e-6894.649 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1... [more]
Transmembrane1.210e-2450.549 superfamily member (Fragment) n=1 Tax=Fibrocapsa... [more]
Transmembrane8.690e-2360.009 superfamily member n=1 Tax=Tribonema minus TaxID... [more]
Transmembrane5.790e-2250.009 superfamily member n=1 Tax=Picocystis salinarum ... [more]
Transmembrane1.160e-1943.869 superfamily member n=6 Tax=Phaeomonas parva TaxI... [more]
Transmembrane1.550e-1953.339 superfamily member n=1 Tax=Trebouxia sp. A1-2 Ta... [more]
Transmembrane2.060e-1949.409 superfamily member n=2 Tax=Rhizophora mucronata ... [more]
Transmembrane2.110e-1950.009 superfamily member n=1 Tax=Picocystis salinarum ... [more]
Transmembrane4.000e-1946.849 superfamily member (Fragment) n=1 Tax=Diacronema... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PANTHERPTHR10766TRANSMEMBRANE 9 SUPERFAMILY PROTEINcoord: 32..112
NoneNo IPR availablePANTHERPTHR10766:SF117coord: 32..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..113
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..34
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..39
score: 0.68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9992contigEcto-sp9_F_contig9992:2408..4689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9992.18056.1mRNA_Ecto-sp9_F_contig9992.18056.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9992 2033..4689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9992.18056.1 ID=prot_Ecto-sp9_F_contig9992.18056.1|Name=mRNA_Ecto-sp9_F_contig9992.18056.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=113bp
MVRRRSWEGGLLPAGGRAWRVGALCCLYGLLLLGRSVEANDINHKYHDGE
SVIVWVNTVGPWYNPQESYPYYRLPFCVPDLVEGTKQKRPSGLGELLAGN
ELRNSGMDVKFKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70