prot_Ecto-sp9_F_contig9569.17686.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9569.17686.1
Unique Nameprot_Ecto-sp9_F_contig9569.17686.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length141
Homology
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G064_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 1.590e-80
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0
Query:    1 MKLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISAGVTAGSVPSPPV 141
            MKLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISAGVTAGS PSPPV
Sbjct:  581 MKLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISAGVTAGSAPSPPV 721          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ09_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.360e-63
Identity = 103/108 (95.37%), Postives = 104/108 (96.30%), Query Frame = 0
Query:   14 MATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLK 121
            MATKVIQDDIASFRPTPEDLDYPGMLLRAA+GGGT D LVNARTG GDQPSPSSPPSS KGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLK
Sbjct:    1 MATKVIQDDIASFRPTPEDLDYPGMLLRAARGGGTSDGLVNARTGAGDQPSPSSPPSSTKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLK 108          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLM6_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.550e-18
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 0
Query:    3 LVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPP------SSG------KGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKK 122
            +++D+QERLI+ A   +  ++  FRPTP DLDYP  LL      GT  +     T     PSP++PP      SSG      +     Y  W+PP+RS L+VLSK++R V+  VFED+A  SV +C +SLK+
Sbjct:  507 IIEDAQERLIFCANAALNKEVTRFRPTPSDLDYPAKLL------GTSTTTPVGGTANTGNPSPTTPPVNASSESSGASNDAVQAQLRVYEAWFPPMRSVLRVLSKIFRVVEPRVFEDIALQSVQSCTKSLKE 632          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLN4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.550e-18
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 0
Query:    3 LVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPP------SSG------KGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKK 122
            +++D+QERLI+ A   +  ++  FRPTP DLDYP  LL      GT  +     T     PSP++PP      SSG      +     Y  W+PP+RS L+VLSK++R V+  VFED+A  SV +C +SLK+
Sbjct:  507 IIEDAQERLIFCANAALNKEVTRFRPTPSDLDYPAKLL------GTSTTTPVGGTANTGNPSPTTPPVNASSESSGASNDAVQAQLRVYEAWFPPMRSVLRVLSKIFRVVEPRVFEDIALQSVQSCTKSLKE 632          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZS1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.310e-18
Identity = 48/122 (39.34%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    3 LVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAA 124
            +++D+QERLIY A   +Q ++  F+P+  +LDYP  L+ A++  GT D +                    +     Y TWYPPL+S L+VLSK+++ VD  VFED+A  SV ACA+ L+ AA
Sbjct:  458 VIEDAQERLIYCAQSTLQKEVMKFKPSAGELDYPKKLISASEKKGTADPV--------------------QAQMMVYETWYPPLKSVLRVLSKIFKVVDQKVFEDIALRSVQACAKCLRDAA 559          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YGQ7_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.160e-17
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 0
Query:    3 LVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSI 127
            +++D+QERLI+ A   +  D+  FR TP+DLDYPG L + A     G+                      K     Y +W+PP+RS L++LSK++R V+  VFEDLA+ SV AC   LK  A  I
Sbjct:  233 VIEDAQERLIFCANNALNKDVIRFRATPDDLDYPGKLTKKATASADGEDEDAV-----------------KKQLQVYESWFPPMRSVLRILSKIFRVVEPRVFEDLARDSVQACTRCLKDGAAHI 340          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2E8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.060e-15
Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 0
Query:    2 KLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLL----------------------------RAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSA-PAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAA 124
            ++ +D+QERLIY+A +V++ ++  FRPTP DL+YPG L                             +  KGG   +  + A +            S G G   P Y TW+P L+ TL +LSK+YRAV++ VF+++AQ ++AAC  S   AA
Sbjct:  583 RIAEDAQERLIYVAERVLRVEVEGFRPTPADLEYPGKLEAYWEAKRRGQEGGXXXXXXXXXXXXTAGKEGKGGAEAEEGMEALS------------SGGMGEVLPVYATWFPTLQMTLSLLSKIYRAVEIHVFQEMAQQALAACTYSFLAAA 722          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7M5_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.120e-15
Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 0
Query:    2 KLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGML------LRAAKGGGTGDSLVNARTGPGD----------QPSPSSPPSSGKGSA-PAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAA 124
            ++ +D+QERLIY+A +V++ ++  FRPTP DL+YPG L       R  + GG+ +                     +    +  S G G   P Y TW+P L+ TL +LSK+YRAV++ VF+++AQ ++AAC  S   AA
Sbjct:   12 RIAEDAQERLIYVAERVLRVEVEGFRPTPADLEYPGKLEAYWEAKRRGQEGGSQEXXXXXXXXXXXXXXXXXXXEAEEGMQALSSGGMGKVLPVYATWFPTLQMTLSLLSKIYRAVELHVFQEMAQQALAACTYSFLAAA 151          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWF7_HETAK)

HSP 1 Score: 80.1 bits (196), Expect = 7.120e-15
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0
Query:    2 KLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISA 129
            ++ +D++ERLI  A + +++D+A   PT  +LDYP  L RAA           A T  G  P               + +WYPPLR+TL VLSK+YR+V   VFEDLAQ +      +L  AAV I+A
Sbjct:   79 RVAEDAEERLILCARRRLEEDVALHEPTDAELDYPATLERAA-----------AATAGGADP---------------FASWYPPLRATLMVLSKIYRSVGRAVFEDLAQQACLVTTHALAGAAVRITA 180          
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Match: Conserved (oligomeric Golgi complex subunit 3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D880_HETAK)

HSP 1 Score: 80.1 bits (196), Expect = 8.430e-15
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0
Query:    2 KLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDSLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAVDMGVFEDLAQLSVAACAESLKKAAVSISA 129
            ++ +D++ERLI  A + +++D+A   PT  +LDYP  L RAA           A T  G  P               + +WYPPLR+TL VLSK+YR+V   VFEDLAQ +      +L  AAV I+A
Sbjct:   79 RVAEDAEERLILCARRRLEEDVALHEPTDAELDYPATLERAA-----------AATAGGADP---------------FASWYPPLRATLMVLSKIYRSVGRAVFEDLAQQACLVTTHALAGAAVRITA 180          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9569.17686.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Conserved1.590e-8099.29oligomeric Golgi complex subunit 3 n=1 Tax=Ectocar... [more]
Conserved1.360e-6395.37oligomeric Golgi complex subunit 3 n=1 Tax=Ectocar... [more]
Conserved1.550e-1840.91oligomeric Golgi complex subunit 3 n=2 Tax=Ditylum... [more]
Conserved1.550e-1840.91oligomeric Golgi complex subunit 3 n=2 Tax=Ditylum... [more]
Conserved5.310e-1839.34oligomeric Golgi complex subunit 3 n=1 Tax=Leptocy... [more]
Conserved2.160e-1738.40oligomeric Golgi complex subunit 3 (Fragment) n=1 ... [more]
Conserved1.060e-1534.21oligomeric Golgi complex subunit 3 n=1 Tax=Nannoch... [more]
Conserved4.120e-1536.43oligomeric Golgi complex subunit 3 n=1 Tax=Nannoch... [more]
Conserved7.120e-1539.06oligomeric Golgi complex subunit 3 (Fragment) n=1 ... [more]
Conserved8.430e-1539.06oligomeric Golgi complex subunit 3 n=1 Tax=Heteros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 2..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9569contigEcto-sp9_F_contig9569:339..3556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9569.17686.1mRNA_Ecto-sp9_F_contig9569.17686.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9569 320..3556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9569.17686.1 ID=prot_Ecto-sp9_F_contig9569.17686.1|Name=mRNA_Ecto-sp9_F_contig9569.17686.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=141bp
MKLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGD
SLVNARTGPGDQPSPSSPPSSGKGSAPAYTTWYPPLRSTLQVLSKVYRAV
DMGVFEDLAQLSVAACAESLKKAAVSISAGVTAGSVPSPPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3